RLG00000035481

RING/Ubox like zinc-binding domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0001311
Physical Location & Seq
Forward (+)
67428384 .. 67436065
7682 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035481

Sequence Viewer

Length: 3450 bp
ATGTCTCAGGCTTTGCTGATTTTCGAGAAAGAAAATGACAAAGCAAAGCAGAGCAGCCAAACAAGCCCTTCTCTCCCATCCTCTCTTAAAAAGCACCCTCTTATTGTGGCTCTCTCTCCACCTCTCTCTCTCTCCTCGCTCTCTCTCTCTCTCTCGCGTTTCGCTTCTCACACAATCTCATCCTCACAGATTCGTCCTCTTCTCGATCCCCAACTGGAAATCATGAGTGATCAGGGAGAAAAGACTTGTCCTCTTTGCGCGGAGGAAATGGATTTGACAGATCAGCAATTGAAACCTTGCAAATGTGGTTATGAGATATGTGTTTGGTGTTGGCACCACATAATGGACATGGCTGAGAAGGATGACACTGAGGGGCGGTGTCCTGCATGCCGTACCCCTTATGATAAGGAAAAGATTGTAGGGGCTGCGAAGTGTGAGAGATTGGTGGCTGAAATCCATACTGAGAGAAAGAAGTCTCAGAAGACAAAAGTTAAGCCAACCACTGAAGGAAGAAAGCAGCTTAGCAGTGTGCGAGTGATTCAACGGAACCTTGTTTACATAGTTGGCTTGCCTCTTAATCTGGCAGATGAAGATCTACTGCAGCGTAAAGAATATTTTGCTCAATATGGGAAGGTTTTAAAGGTTTCTATGTCTCGGACAGCAGCTGGTGTCATTCAACAATTTCCAAACAATACATGTAGTGTATATATTACTTACTCAAAAGAGGAGGAAGCGGTTCGCTGTATTCAAAATGTACATGGGTTTCTATTGGATGGAAGGTCTTTGAGGGCTTGCTTTGGTACCACAAAGTATTGTCACGCATGGTTAAGAAATGTGCCTTGCACCAATCCCGATTGTTTGTATCTGCACGAGGTTGGATGTCATGAGGATAGTTTCACTAAAGATGAAATAATTTCTGCATACACTAGGAGTAGAGTACAACAAATTACTGGTACTCTAAACCCTATGCAGCGGCGGTCAGGGAGTGTGTTGCCTCCACCACTAGATGATTACTGTAATAGCAGTTCTGCTTCTACCGCAGGGCCTGCTGTTAAAAATGGTTCAAGTAATACTGGAACCCTCATTAAAGGTTCTCCTCCAAATGGAAGCTCTGGTAGATCTATTGCTCTTCCAGCTGCAGCCTCATGGGGTACGCGTGGTTCAAATTCTCATCCACCAGCTATGCAAATAATATATTCAAATGGACATACAAAACAGAAACCTGATACAGTCAGTTGCACAGTGCCATTTTCTTCAGCTGCTGTTTCTACTGGCCAGGCTTCTATAGCGCATAGCGATGCAGGAAAGAGGTCAACTTTGAATGAAGACAGTCAGACTATGCAAACTAAAGGTAAACCGGAATCACTGAAAATTGTGAAACAACACATTAGTGTGGATAGTCAAATTGCCCTGTCGGACAATCCTGCTGCACCCGATGAAGCTTCTGCTTCTGTTAATGTTAGCAGCCAGTTATCTTGTCCACCTGCATCCAAGGACAACAATAGAGGCAGTAGTATGCAGCCAACTAGCACTGCCCCCAACCATAATCGGCAGCCTTTTAGTTCCTGTCATGAAAGTGAAAGTATTGTTTCTAATGAAGAAGCCACCCAAAGCTTATGCTCCGATATATCTTTAATGAGCATTGATAGAAATTCTATGCTTGATCATTCTGGTGTAGTCAGACCTAATAATTCAGCTTCAGATAATTCGTATATTAAATCGCCTCGGGACCAAGGGTTACAACAATATTGTGCTGAACAGCCTAGAGAATCTCCTATAACAACTGAGAGAGCAGTAACAAGAGAACAATCCAACTGGTTATCAGAGTCACAACCATTACCTAGTATATCTTCTGAGGTGGAGGAGGATGTACTATCTTTTGATAATCAAAGACTCAAGGACCCAGAAGTGAGTCGTGCGCCGTATCTGTCTAGTTTGCCCAATGCAGTCCATGTTCCAAATCACTCTAGGTCTCCGTTGCTACCTAGTGAGGGTTATGGTGCAGTTTATTCAAGTGCTGATTGCCTTTTTGTAGATAATAAAATTAGGGACAGCTCACATCTATCTTCGACCAACACTCCGGTACAATCTAATGGTTACCATGAGAATTTTGTAAGCAGCTCTTCTGGTTTAGAGAGGCCTTTGGAGCATTCATTTCTTAACCGAAATGAAAGCCTGGGGAAGCATGGTCGAAGATTCTTGGGTGATGCAGCTAATCCTGATTTCAGTAATGCTGTAGACAAGGGAGAGAGCAGCATAATCTCAAATATATTATCAATGGACTTTGACACTTGGGATGACCCAATAACATCGCCTCAAAATTTCTCCAAGTTTTTGGGTGAATCTGATAGACAGTCTGGAGCTCAGAAAGTGTCCAGTTCGTGGAAGGTGCCAAATAATAATCAGTCAAGATTCTCTTTTGCAAGACAGGAGGATTCTAGAAATCAGGCATTTGATCTACAGTCATCTCAGAATGTCATTGGGCGGTTGTCACAGAACCAAGGATTCCATCATGGCTATTCTGAAAATCGAGATTTATGTTTGGATAATTATGGAATTGGAAATGGTTTTCCTTCTAGTACTTTTGAAGATTCAGAAAATCACGCCAACAATCTTTTAGCCTTCTCTTCTAACAAGCTTTCTGCAGTTTCAAGGGCTCAAATCTCTGCTCCACCGGGTTTCTCTGTGCCAAGCAGGGCCCCACCTCCGGGCTTTACTTCTCAAGAGAGAGTGGAGCATGATTTTGACTCACTGTCTGGGAATCTTTTGCACGATAACTCCTCTCTGTTGAGAAATGCCTATCAACCTCAGCCCATGGGGAATATTGGTAGCTCTGTGGATATTGAGTTTATGGATCCTGCTATATTGGCAGTTGGTAAAGGGAGACTGCAAGGCGGGCTTAACAACCCTGGTGTAGATATGAGATCCAACTTCCCTTCACAGTTAAGCGCCTTTGAAAACGATGCAAGGCTTCAGCTCTTGATGCAAAGATCCTTCTCCCAACAACAAAACCTTAGGTATCCTGATTTTGGGGATGGCTATTCTCATGTCAATGATAACTATGGAATGTCTTCGAGGCTTTTGGATCAATCTCAGGCAAGCAATATGTCGCCTTTTGCTCAACTGTCTCTCCAACAATCCAGAAATAATCGGTCCATGTCAAATGGCCATTGGGATGGGTGGAATGAGGTTCAGGGCGCTAACACTATGGGTATGGCAGAGCTCCTGAGAAATGAGAGAGTAAATGAGAGACTAGGATACAATAAGTTCTATTCTGGTTATGAAGAATCAAAGTTTCGGATGCCCAGTTCTGGCGATCTGTATAACAGAACCTTTGGGATGATGGGACTGACTCGTAACTGGTCTTGCTCTTGGCAGCCTAATGTAGGGTCAGACTCCTGTAACTATTGGGGTCTAAAATCCTGCAGGTGCTGGTGTGCTTTGATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000075 GO:0000077 GO:0000278 GO:0000288 GO:0000289 GO:0000956 GO:0002682 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006401 GO:0006402 GO:0006464 GO:0006508 GO:0006511 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006977 GO:0007049 GO:0007093 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010564 GO:0010605 GO:0010629 GO:0010948 GO:0016070 GO:0016071 GO:0016567 GO:0016740 GO:0019222 GO:0019439 GO:0019538 GO:0019787 GO:0019941 GO:0022402 GO:0023052 GO:0030163 GO:0030330 GO:0031570 GO:0031571 GO:0032446 GO:0033554 GO:0034641 GO:0034655 GO:0035556 GO:0036211 GO:0042770 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0044773 GO:0044774 GO:0044783 GO:0044819 GO:0045595 GO:0045637 GO:0045652 GO:0045786 GO:0045787 GO:0045930 GO:0046483 GO:0046700 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051603 GO:0051716 GO:0051726 GO:0051865 GO:0060255 GO:0065007 GO:0070647 GO:0071156 GO:0071158 GO:0071704 GO:0072331 GO:0072395 GO:0072401 GO:0072413 GO:0072422 GO:0072431 GO:0090068 GO:0090304 GO:0140096 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575 GO:1901987 GO:1901988 GO:1901990 GO:1901991 GO:1902400 GO:1902402 GO:1902403 GO:1902806 GO:1902807 GO:1903047 GO:1903706 GO:2000026 GO:2000045 GO:2000134
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
RRM_1 zf-RING_4

Protein Analysis

1150

Amino Acids

126.52

Weight (kDa)

6.26

Isoelectric Point (pI)

57.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_4 PF14570 83 - 135 1.7e-19 RING/Ubox like zinc-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1492, 3417
Acc36I ACCTGC 2 cut(s) 1492, 3417
Acc65I GGTACC 1 cut(s) 800
AccB1I GGYRCC 3 cut(s) 333, 800, 2389
AccB7I CCANNNNNTGG 2 cut(s) 343, 2382
AccI GTMKAC 1 cut(s) 2238
AccII CGCG 3 cut(s) 157, 260, 1156
AciI CCGC 8 cut(s) 260, 376, 734, 973, 976, 1038, 2485, 2895
AclWI GGATC 6 cut(s) 200, 2849, 2862, 2919, 2985, 3093
AcoI YGGCCR 2 cut(s) 1273, 3166
AcsI RAATTY 4 cut(s) 1165, 1651, 2107, 2320
AcuI CTGAAG 4 cut(s) 525, 1239, 1683, 2957
AfaI GTAC 9 cut(s) 394, 756, 802, 939, 955, 1153, 1872, 2085, 2581
AfiI CCNNNNNNNGG 9 cut(s) 343, 1103, 1991, 2382, 2707, 2708, 3029, 3311, 3386
AflIII ACRYGT 2 cut(s) 695, 1154
AhdI GACNNNNNGTC 1 cut(s) 2752
AjnI CCWGG 3 cut(s) 1275, 2175, 2908
AleI CACNNNNGTG 1 cut(s) 1389
AloI GAACNNNNNNTCC 2 cut(s) 3292, 3324
Alw21I GWGCWC 2 cut(s) 2365, 3225
Alw26I GTCTC 7 cut(s) 9, 480, 657, 1977, 2878, 3132, 3244
AlwI GGATC 6 cut(s) 200, 2849, 2862, 2919, 2985, 3093
AlwNI CAGNNNCTG 4 cut(s) 665, 1046, 1262, 3432
Ama87I CYCGRG 1 cut(s) 1725
AoxI GGCC 5 cut(s) 1043, 1273, 2138, 2697, 3166
ApaI GGGCCC 1 cut(s) 2701
ApoI RAATTY 4 cut(s) 1165, 1651, 2107, 2320
Asp700I GAANNNNTTC 2 cut(s) 735, 3070
Asp718I GGTACC 1 cut(s) 800
AspLEI GCGC 5 cut(s) 260, 1291, 1921, 2951, 3200
AspS9I GGNCC 6 cut(s) 1043, 1729, 1900, 2697, 2698, 3153
AsuC2I CCSGG 2 cut(s) 2676, 2709
AsuHPI GGTGA 2 cut(s) 2216, 2351
AvaI CYCGRG 1 cut(s) 1725
AvaII GGWCC 3 cut(s) 1729, 1900, 3153
AxyI CCTNAGG 1 cut(s) 3014
BaeGI GKGCMC 1 cut(s) 2701
BalI TGGCCA 2 cut(s) 1275, 3168
BamHI GGATCC 1 cut(s) 2854
BanI GGYRCC 3 cut(s) 333, 800, 2389
BanII GRGCYC 4 cut(s) 2365, 2659, 2701, 3225
BauI CACGAG 1 cut(s) 869
BbsI GAAGAC 3 cut(s) 488, 1332, 3063
Bbv12I GWGCWC 2 cut(s) 2365, 3225
BbvCI CCTCAGC 1 cut(s) 2808
BccI CCATC 6 cut(s) 85, 767, 2517, 3029, 3170, 3337
BceAI ACGGC 2 cut(s) 375, 1906
BciT130I CCWGG 3 cut(s) 1277, 2177, 2910
BciVI GTATCC 2 cut(s) 3030, 3251
BclI TGATCA 2 cut(s) 229, 1663
BcnI CCSGG 2 cut(s) 2676, 2709
BcoDI GTCTC 7 cut(s) 9, 480, 657, 1977, 2878, 3132, 3244
BfmI CTRYAG 7 cut(s) 599, 1137, 1284, 2235, 2459, 2643, 3424
BfoI RGCGCY 2 cut(s) 2952, 3201
BfuAI ACCTGC 2 cut(s) 1492, 3417
BfuI GTATCC 2 cut(s) 3030, 3251
BglII AGATCT 2 cut(s) 592, 1118
BlpI GCTNAGC 1 cut(s) 521
BmcAI AGTACT 1 cut(s) 2581
Bme1390I CCNGG 5 cut(s) 1277, 2177, 2676, 2709, 2910
Bme18I GGWCC 3 cut(s) 1729, 1900, 3153
BmeRI GACNNNNNGTC 1 cut(s) 2752
BmeT110I CYCGRG 1 cut(s) 1725
BmgT120I GGNCC 6 cut(s) 1043, 1729, 1900, 2697, 2698, 3153
BmrFI CCNGG 5 cut(s) 1277, 2177, 2676, 2709, 2910
BmrI ACTGGG 1 cut(s) 3300
BmsI GCATC 6 cut(s) 1288, 1496, 2197, 2953, 2973, 3291
BmuI ACTGGG 1 cut(s) 3300
BpiI GAAGAC 3 cut(s) 488, 1332, 3063
BpmI CTGGAG 1 cut(s) 2379
Bpu10I CCTNAGC 1 cut(s) 2808
Bpu1102I GCTNAGC 1 cut(s) 521
BpuEI CTTGAG 2 cut(s) 1880, 2706
BpuMI CCSGG 2 cut(s) 2676, 2709
BsaBI GATNNNNATC 1 cut(s) 591
BsaI GGTCTC 1 cut(s) 1977
BsaJI CCNNGG 7 cut(s) 1491, 1724, 1732, 2176, 2500, 2814, 2908
BsaWI WCCGGW 2 cut(s) 1357, 2080
BsaXI ACNNNNNCTCC 6 cut(s) 2062, 2092, 2762, 2792, 3114, 3144
Bsc4I CCNNNNNNNGG 9 cut(s) 343, 1103, 1991, 2382, 2707, 2708, 3029, 3311, 3386
Bse1I ACTGG 9 cut(s) 219, 955, 1078, 1276, 1468, 1820, 2376, 3306, 3365
Bse21I CCTNAGG 1 cut(s) 3014
Bse8I GATNNNNATC 1 cut(s) 591
BseBI CCWGG 3 cut(s) 1277, 2177, 2910
BseDI CCNNGG 7 cut(s) 1491, 1724, 1732, 2176, 2500, 2814, 2908
BseJI GATNNNNATC 1 cut(s) 591
BseLI CCNNNNNNNGG 9 cut(s) 343, 1103, 1991, 2382, 2707, 2708, 3029, 3311, 3386
BseNI ACTGG 9 cut(s) 219, 955, 1078, 1276, 1468, 1820, 2376, 3306, 3365
BseRI GAGGAG 5 cut(s) 124, 740, 1086, 1877, 2770
BseSI GKGCMC 1 cut(s) 2701
BsgI GTGCAG 3 cut(s) 851, 1413, 2022
Bsh1236I CGCG 3 cut(s) 157, 260, 1156
BshFI GGCC 5 cut(s) 1045, 1275, 2140, 2699, 3168
BshNI GGYRCC 3 cut(s) 333, 800, 2389
BsiHKAI GWGCWC 2 cut(s) 2365, 3225
BsiHKCI CYCGRG 1 cut(s) 1725
BsiSI CCGG 4 cut(s) 1358, 2081, 2675, 2708
BslFI GGGAC 3 cut(s) 1742, 2063, 3360
BslI CCNNNNNNNGG 9 cut(s) 343, 1103, 1991, 2382, 2707, 2708, 3029, 3311, 3386
BsmAI GTCTC 7 cut(s) 9, 480, 657, 1977, 2878, 3132, 3244
BsmFI GGGAC 3 cut(s) 1742, 2063, 3360
BsmI GAATGC 1 cut(s) 2149
BsnI GGCC 5 cut(s) 1045, 1275, 2140, 2699, 3168
Bso31I GGTCTC 1 cut(s) 1977
BsoBI CYCGRG 1 cut(s) 1725
Bsp120I GGGCCC 1 cut(s) 2697
Bsp1286I GDGCHC 4 cut(s) 2365, 2659, 2701, 3225
Bsp1407I TGTACA 1 cut(s) 754
Bsp1720I GCTNAGC 1 cut(s) 521
Bsp19I CCATGG 1 cut(s) 2814
BspACI CCGC 8 cut(s) 260, 376, 734, 973, 976, 1038, 2485, 2895
BspANI GGCC 5 cut(s) 1045, 1275, 2140, 2699, 3168
BspFNI CGCG 3 cut(s) 157, 260, 1156
BspHI TCATGA 3 cut(s) 222, 883, 1570
BspMAI CTGCAG 4 cut(s) 603, 1141, 2647, 3428
BspMI ACCTGC 2 cut(s) 1492, 3417
BspPI GGATC 6 cut(s) 200, 2849, 2862, 2919, 2985, 3093
BspQI GCTCTTC 2 cut(s) 1134, 2128
BspT107I GGYRCC 3 cut(s) 333, 800, 2389
BspTNI GGTCTC 1 cut(s) 1977
BsrGI TGTACA 1 cut(s) 754
BsrI ACTGG 9 cut(s) 219, 955, 1078, 1276, 1468, 1820, 2376, 3306, 3365
BssECI CCNNGG 7 cut(s) 1491, 1724, 1732, 2176, 2500, 2814, 2908
BssSI CACGAG 1 cut(s) 869
BssT1I CCWWGG 4 cut(s) 1491, 1732, 2500, 2814
Bst2BI CACGAG 1 cut(s) 869
Bst2UI CCWGG 3 cut(s) 1277, 2177, 2910
Bst4CI ACNGT 9 cut(s) 1016, 1231, 1243, 1331, 2355, 2463, 2754, 2943, 3126
Bst6I CTCTTC 4 cut(s) 204, 1134, 2128, 2632
BstAPI GCANNNNNTGC 1 cut(s) 1046
BstAUI TGTACA 1 cut(s) 754
BstC8I GCNNGC 6 cut(s) 388, 569, 793, 1047, 2897, 3100
BstDSI CCRYGG 1 cut(s) 2814
BstEII GGTNACC 1 cut(s) 2096
BstENI CCTNNNNNAGG 1 cut(s) 3384
BstFNI CGCG 3 cut(s) 157, 260, 1156
BstH2I RGCGCY 2 cut(s) 2952, 3201
BstHHI GCGC 5 cut(s) 260, 1291, 1921, 2951, 3200
BstMAI GTCTC 7 cut(s) 9, 480, 657, 1977, 2878, 3132, 3244
BstMWI GCNNNNNNNGC 9 cut(s) 63, 1037, 1046, 1133, 1286, 2146, 2867, 2896, 2983
BstNI CCWGG 3 cut(s) 1277, 2177, 2910
BstNSI RCATGY 2 cut(s) 390, 699
BstPI GGTNACC 1 cut(s) 2096
BstSCI CCNGG 5 cut(s) 1275, 2175, 2674, 2707, 2908
BstSFI CTRYAG 7 cut(s) 599, 1137, 1284, 2235, 2459, 2643, 3424
BstSLI GKGCMC 1 cut(s) 2701
BstUI CGCG 3 cut(s) 157, 260, 1156
BstV2I GAAGAC 3 cut(s) 488, 1332, 3063
BstX2I RGATCY 5 cut(s) 592, 1118, 2854, 2924, 2990
BstXI CCANNNNNNTGG 2 cut(s) 2335, 3176
BstYI RGATCY 5 cut(s) 592, 1118, 2854, 2924, 2990
Bsu36I CCTNAGG 1 cut(s) 3014
BsuI GTATCC 2 cut(s) 3030, 3251
BsuRI GGCC 5 cut(s) 1045, 1275, 2140, 2699, 3168
BtgI CCRYGG 1 cut(s) 2814
BtgZI GCGATG 2 cut(s) 1311, 2295
BtsI GCAGTG 2 cut(s) 532, 1530
BtsIMutI CAGTG 7 cut(s) 366, 501, 532, 1248, 1364, 1530, 2750
BveI ACCTGC 2 cut(s) 1492, 3417
Cac8I GCNNGC 6 cut(s) 388, 569, 793, 1047, 2897, 3100
CaiI CAGNNNCTG 4 cut(s) 665, 1046, 1262, 3432
CciI TCATGA 3 cut(s) 222, 883, 1570
CfoI GCGC 5 cut(s) 260, 1291, 1921, 2951, 3200
Cfr13I GGNCC 6 cut(s) 1043, 1729, 1900, 2697, 2698, 3153
Csp6I GTAC 9 cut(s) 393, 755, 801, 938, 954, 1152, 1871, 2084, 2580
CviQI GTAC 9 cut(s) 393, 755, 801, 938, 954, 1152, 1871, 2084, 2580
DraI TTTAAA 1 cut(s) 639
DriI GACNNNNNGTC 1 cut(s) 2752
EaeI YGGCCR 2 cut(s) 1273, 3166
Eam1104I CTCTTC 4 cut(s) 204, 1134, 2128, 2632
Eam1105I GACNNNNNGTC 1 cut(s) 2752
EarI CTCTTC 4 cut(s) 204, 1134, 2128, 2632
Ecl136II GAGCTC 2 cut(s) 2363, 3223
Eco130I CCWWGG 4 cut(s) 1491, 1732, 2500, 2814
Eco147I AGGCCT 1 cut(s) 2140
Eco24I GRGCYC 4 cut(s) 2365, 2659, 2701, 3225
Eco31I GGTCTC 1 cut(s) 1977
Eco47I GGWCC 3 cut(s) 1729, 1900, 3153
Eco53kI GAGCTC 2 cut(s) 2363, 3223
Eco57I CTGAAG 4 cut(s) 525, 1239, 1683, 2957
Eco81I CCTNAGG 1 cut(s) 3014
Eco88I CYCGRG 1 cut(s) 1725
Eco91I GGTNACC 1 cut(s) 2096
EcoICRI GAGCTC 2 cut(s) 2363, 3223
EcoNI CCTNNNNNAGG 1 cut(s) 3384
EcoO109I RGGNCCY 4 cut(s) 1043, 1900, 2697, 2698
EcoO65I GGTNACC 1 cut(s) 2096
EcoRII CCWGG 3 cut(s) 1275, 2175, 2908
EcoT14I CCWWGG 4 cut(s) 1491, 1732, 2500, 2814
EcoT38I GRGCYC 4 cut(s) 2365, 2659, 2701, 3225
ErhI CCWWGG 4 cut(s) 1491, 1732, 2500, 2814
FalI AAGNNNNNCTT 6 cut(s) 2107, 2139, 2401, 2433, 2883, 2915
FaqI GGGAC 3 cut(s) 1742, 2063, 3360
FauI CCCGC 1 cut(s) 2888
FbaI TGATCA 2 cut(s) 229, 1663
FblI GTMKAC 1 cut(s) 2238
FriOI GRGCYC 4 cut(s) 2365, 2659, 2701, 3225
GlaI GCGC 5 cut(s) 259, 1290, 1920, 2950, 3199
GsuI CTGGAG 1 cut(s) 2379
HaeII RGCGCY 2 cut(s) 2952, 3201
HaeIII GGCC 5 cut(s) 1045, 1275, 2140, 2699, 3168
HapII CCGG 4 cut(s) 1358, 2081, 2675, 2708
HhaI GCGC 5 cut(s) 260, 1291, 1921, 2951, 3200
Hin6I GCGC 5 cut(s) 258, 1289, 1919, 2949, 3198
HinP1I GCGC 5 cut(s) 258, 1289, 1919, 2949, 3198
HincII GTYRAC 1 cut(s) 1314
HindII GTYRAC 1 cut(s) 1314
HindIII AAGCTT 3 cut(s) 1440, 1612, 2636
HpaII CCGG 4 cut(s) 1358, 2081, 2675, 2708
HphI GGTGA 2 cut(s) 2216, 2351
Hpy166II GTNNAC 5 cut(s) 556, 1314, 1355, 1481, 2239
Hpy8I GTNNAC 5 cut(s) 556, 1314, 1355, 1481, 2239
HpyCH4III ACNGT 9 cut(s) 1016, 1231, 1243, 1331, 2355, 2463, 2754, 2943, 3126
HpyF10VI GCNNNNNNNGC 9 cut(s) 63, 1037, 1046, 1133, 1286, 2146, 2867, 2896, 2983
HspAI GCGC 5 cut(s) 258, 1289, 1919, 2949, 3198
KpnI GGTACC 1 cut(s) 804
Ksp22I TGATCA 2 cut(s) 229, 1663
LguI GCTCTTC 2 cut(s) 1134, 2128
LmnI GCTCC 6 cut(s) 1625, 2146, 2360, 2674, 2734, 3228
LweI GCATC 6 cut(s) 1288, 1496, 2197, 2953, 2973, 3291
MaeIII GTNAC 8 cut(s) 815, 1737, 1795, 1827, 2096, 2490, 3356, 3401
MfeI CAATTG 1 cut(s) 287
MflI RGATCY 5 cut(s) 592, 1118, 2854, 2924, 2990
MhlI GDGCHC 4 cut(s) 2365, 2659, 2701, 3225
MlsI TGGCCA 2 cut(s) 1275, 3168
MluI ACGCGT 1 cut(s) 1154
MluNI TGGCCA 2 cut(s) 1275, 3168
MlyI GAGTC 6 cut(s) 1835, 1887, 1921, 2741, 3346, 3389
MmeI TCCRAC 5 cut(s) 856, 1395, 1836, 2952, 3157
Mox20I TGGCCA 2 cut(s) 1275, 3168
MroXI GAANNNNTTC 2 cut(s) 735, 3070
MscI TGGCCA 2 cut(s) 1275, 3168
MslI CAYNNNNRTG 7 cut(s) 1296, 1389, 1391, 1575, 1671, 3051, 3174
Msp20I TGGCCA 2 cut(s) 1275, 3168
MspA1I CMGCKG 4 cut(s) 665, 973, 1136, 1259
MspI CCGG 4 cut(s) 1358, 2081, 2675, 2708
MspR9I CCNGG 5 cut(s) 1277, 2177, 2676, 2709, 2910
MunI CAATTG 1 cut(s) 287
Mva1269I GAATGC 1 cut(s) 2149
MvaI CCWGG 3 cut(s) 1277, 2177, 2910
MvnI CGCG 3 cut(s) 157, 260, 1156
MwoI GCNNNNNNNGC 9 cut(s) 63, 1037, 1046, 1133, 1286, 2146, 2867, 2896, 2983
NciI CCSGG 2 cut(s) 2676, 2709
NcoI CCATGG 1 cut(s) 2814
NmuCI GTSAC 3 cut(s) 815, 1827, 2490
NspI RCATGY 2 cut(s) 390, 699
OliI CACNNNNGTG 1 cut(s) 1389
PaeI GCATGC 1 cut(s) 390
PagI TCATGA 3 cut(s) 222, 883, 1570
PaqCI CACCTGC 2 cut(s) 1492, 3417
PceI AGGCCT 1 cut(s) 2140
PciI ACATGT 1 cut(s) 695
PciSI GCTCTTC 2 cut(s) 1134, 2128
PctI GAATGC 1 cut(s) 2149
PdmI GAANNNNTTC 2 cut(s) 735, 3070
PflMI CCANNNNNTGG 2 cut(s) 343, 2382
PleI GAGTC 6 cut(s) 1834, 1887, 1920, 2741, 3346, 3389
PpsI GAGTC 6 cut(s) 1834, 1887, 1920, 2741, 3346, 3389
PpuMI RGGWCCY 1 cut(s) 1900
PscI ACATGT 1 cut(s) 695
Psp124BI GAGCTC 2 cut(s) 2365, 3225
Psp5II RGGWCCY 1 cut(s) 1900
Psp6I CCWGG 3 cut(s) 1275, 2175, 2908
PspEI GGTNACC 1 cut(s) 2096
PspGI CCWGG 3 cut(s) 1275, 2175, 2908
PspOMI GGGCCC 1 cut(s) 2697
PspPI GGNCC 6 cut(s) 1043, 1729, 1900, 2697, 2698, 3153
PspPPI RGGWCCY 1 cut(s) 1900
PsrI GAACNNNNNNTAC 6 cut(s) 539, 571, 1009, 1041, 1144, 1176
PstI CTGCAG 4 cut(s) 603, 1141, 2647, 3428
PstNI CAGNNNCTG 4 cut(s) 665, 1046, 1262, 3432
PsuI RGATCY 5 cut(s) 592, 1118, 2854, 2924, 2990
PvuII CAGCTG 3 cut(s) 665, 1136, 1259
RsaI GTAC 9 cut(s) 394, 756, 802, 939, 955, 1153, 1872, 2085, 2581
RsaNI GTAC 9 cut(s) 393, 755, 801, 938, 954, 1152, 1871, 2084, 2580
RseI CAYNNNNRTG 7 cut(s) 1296, 1389, 1391, 1575, 1671, 3051, 3174
SacI GAGCTC 2 cut(s) 2365, 3225
SapI GCTCTTC 2 cut(s) 1134, 2128
Sau96I GGNCC 6 cut(s) 1043, 1729, 1900, 2697, 2698, 3153
SbfI CCTGCAGG 1 cut(s) 3428
ScaI AGTACT 1 cut(s) 2581
SchI GAGTC 6 cut(s) 1835, 1887, 1921, 2741, 3346, 3389
ScrFI CCNGG 5 cut(s) 1277, 2177, 2676, 2709, 2910
SdaI CCTGCAGG 1 cut(s) 3428
SduI GDGCHC 4 cut(s) 2365, 2659, 2701, 3225
SfaNI GCATC 6 cut(s) 1288, 1496, 2197, 2953, 2973, 3291
SfcI CTRYAG 7 cut(s) 599, 1137, 1284, 2235, 2459, 2643, 3424
SinI GGWCC 3 cut(s) 1729, 1900, 3153
SmiMI CAYNNNNRTG 7 cut(s) 1296, 1389, 1391, 1575, 1671, 3051, 3174
SmlI CTYRAG 2 cut(s) 1895, 2721
SmoI CTYRAG 2 cut(s) 1895, 2721
SphI GCATGC 1 cut(s) 390
Sse8387I CCTGCAGG 1 cut(s) 3428
SseBI AGGCCT 1 cut(s) 2140
SsiI CCGC 8 cut(s) 260, 376, 734, 973, 976, 1038, 2485, 2895
SspI AATATT 3 cut(s) 614, 1748, 2824
SstI GAGCTC 2 cut(s) 2365, 3225
StuI AGGCCT 1 cut(s) 2140
StyD4I CCNGG 5 cut(s) 1275, 2175, 2674, 2707, 2908
StyI CCWWGG 4 cut(s) 1491, 1732, 2500, 2814
TaaI ACNGT 9 cut(s) 1016, 1231, 1243, 1331, 2355, 2463, 2754, 2943, 3126
TaqI TCGA 6 cut(s) 24, 204, 2069, 2191, 2530, 3074
TaqII GACCGA 1 cut(s) 3141
TatI WGTACW 4 cut(s) 754, 937, 1870, 2579
TauI GCSGC 1 cut(s) 976
TscAI CASTG 7 cut(s) 373, 508, 532, 1248, 1371, 1537, 2757
TseFI GTSAC 3 cut(s) 815, 1827, 2490
Tsp45I GTSAC 3 cut(s) 815, 1827, 2490
TspDTI ATGAA 9 cut(s) 603, 921, 1338, 1452, 1587, 1611, 2142, 2184, 3297
TspGWI ACGGA 2 cut(s) 559, 1965
TspRI CASTG 7 cut(s) 373, 508, 532, 1248, 1371, 1537, 2757
Van91I CCANNNNNTGG 2 cut(s) 343, 2382
VpaK11BI GGWCC 3 cut(s) 1729, 1900, 3153
XagI CCTNNNNNAGG 1 cut(s) 3384
XapI RAATTY 4 cut(s) 1165, 1651, 2107, 2320
XbaI TCTAGA 1 cut(s) 2438
XceI RCATGY 2 cut(s) 390, 699
XmiI GTMKAC 1 cut(s) 2238
XmnI GAANNNNTTC 2 cut(s) 735, 3070
ZrmI AGTACT 1 cut(s) 2581
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.