Rh5AG403100

RING/Ubox like zinc-binding domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0001311
Physical Location & Seq
Forward (+)
69747630 .. 69755096
7467 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG403100.1

Sequence Viewer

Length: 2322 bp
ATGGCATATATTCTTATTTTAATTTTTTTTTGTTTTATCTGGCAGAATACTGGAACCCTCATTAAAGGTTCTCCTCCAAATGGAAGCTCTGGTAGATCTATTGCTCTTCCAGCTGCAGCCTCATGGGGTACGCGTGGTTCAAATTCTCAACCACCAGCTATGCAAATAATATATTCAAACGGACATACAAAACAGAAACCTGATACAGTCAATTGCACAGTGCCATTTTCTTTGGCTGCTGTTTCTACTGGCCAGGCTTCTATAGTGCATAGCGATGCAGGAAAGAGGCCAACTTTGAATGAAGACAGTCAGACTATGCAAGCTAAAGGTAAACCGGAATCACTGAAAATTGTGAAACAACACATTAGTGTGGATAGTCAAATTGCCCTGTCGGACAATCCTGCTGCACCCGATGAAGCTTCTGCTTCTGTTAATGTTAGCAGTCAGTTATCTTGTCCACCTGCATCCAAGGACAACAATAGAGGCAGTAGTATGCAGCCAACTTGCACTGCCACCAACCATAATCGGCAGCCTTTTAGTTCCTGTCATGAAAGTGAAAGTATTGTTTCTAATGAAGAAGCCACCCAAAGCTTATGCTCCGATATATCTTTAATGAGCACTGATAGAAATTCTATGCTTGATCATTCTGGTGTAGTCAGACCTAATAATTCAGCTTCAGATAATTCGTATATTAAATCGCCTCGGGACCAAGGGTTACAACAATATTGTGCTGAACAGCCAAGAGAATCTCCTATAACAACTGAGAGAGCAGTAACAAGAGAACAATCCAACTGGTTATCAGAGTCACAACCATTACCTAGTATATCTTCTGAGGTGGAGGAGGATGTACTATCTTTTGATAATCAAAGACTCAAGGACCCGGAAGTGAGTCGTGCGCCGTATCTGTCTGGTTTGCCTAATGCAGTCCATGTTCCAAATCACTCTAGGTCTCCGTTGCTACCTAGTGAGGGTTATGGTGCAGTTTATTCAAGTGCTGATCGCCTTTTTGTAGATAATAAAATTAGGGACAGCTCACTTCTATCTTCAACCAACATTCCGGTACAATCTAATGGTTACCATGAGAATTTTGTAAGCAGCTCTTCTGGTTTAGAGAAGCCTTTGGAGCATTCATTTCTTAACCGAAATGAAAGCCTGGGGAAGCATGGTCGAAGATTCTTGGGTGATGCAGCTAATCCTGATTTCAGTAATGCTGTAGACAAGGGAGAGAGCAGCATAATCTCAAATATATTATCAATGGACTTTGACACTTGGGATGACCCAATAACATCGCCTCAAAATTTCTCCAAGTTTTTGGGTGAATCTGATAGACAGTCTGGAGCTCAGAAACATTCCAGTTCGTGGAAGGTGCCAAATAATAATCAGTCAAGATTCTCTTTCGCAAGACAGGAGGATTCTAGAAATCAGGCATATGATCTACAGTCATCTCAGAATGTCATTGGGCGGTTGTCACAGAACCAGGCACAGAACCAAGGATTCCATCATGGCTATTCTGAAAATCGAGATTTATGTTTGGATAATTTTGGAAGTGGAAATGGTTTTACTTCTAGTACTTTTGAAGATTCTGAAAATCACGCCAACAATCTTTTAGCCTTCTCTTCTAACAAGCTTTCTGCAGTTTCAAGGGCTCAAATCTCTGCTCCTCCGGGATTCTCTGTGCCAAGCAGGGCCCCACCTCCGGGCTTTACTTCTCAAGAGAGAATAGAGCATGATTTTGACTCACTGTCTGGGAATCTTTTGCATGATAACTCCTCTCTGTTGAGAAATGCCTATCAACCTCAGCCCACGGGGAATATTGGTAGCTCTGTGGATATTGAGTTTATGGATCCTGCTATATTGGCAGTTGGTAAAGGGAGACTGCAAGGTGGGCTTAACAACCCTGGTGTAGATATGAGATCCAACTTCCCTTCACAGTTAAGTGCCTTTGAAAACGATGCAAGACTTCAGCTCTTGATGCAAAGATCCTTCTCCCAACAACAAAACCTTAGGTATCCTGATTTTGGGGATGGCTATTCTCATGTCAATGATAACTATGGAATGTCTTCGAGACTTTTGGATCAATCTCAGGCAAGCAATATGTCGCCTTTTGCTCAACTCTCTCTCCAACAATCCAGAAATAATCGGTCCATGTCAAATGGCCATTGGGATGGGTGGAATGAGGTTCAGGGCGGTAACACTATGGGTATGGCAGAGCTCCTGAGAAATGAGAGACTAGGATACAATAAGTTCTATTCTGGTTATGAAGAATCAAAGTTTCGGATGCCCAGTTCTGGCGATCTGTATAATAGAACCTTTGGGATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000075 GO:0000077 GO:0000278 GO:0000288 GO:0000289 GO:0000956 GO:0002682 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006401 GO:0006402 GO:0006464 GO:0006508 GO:0006511 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006977 GO:0007049 GO:0007093 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010564 GO:0010605 GO:0010629 GO:0010948 GO:0016070 GO:0016071 GO:0016567 GO:0016740 GO:0019222 GO:0019439 GO:0019538 GO:0019787 GO:0019941 GO:0022402 GO:0023052 GO:0030163 GO:0030330 GO:0031570 GO:0031571 GO:0032446 GO:0033554 GO:0034641 GO:0034655 GO:0035556 GO:0036211 GO:0042770 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0044773 GO:0044774 GO:0044783 GO:0044819 GO:0045595 GO:0045637 GO:0045652 GO:0045786 GO:0045787 GO:0045930 GO:0046483 GO:0046700 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051603 GO:0051716 GO:0051726 GO:0051865 GO:0060255 GO:0065007 GO:0070647 GO:0071156 GO:0071158 GO:0071704 GO:0072331 GO:0072395 GO:0072401 GO:0072413 GO:0072422 GO:0072431 GO:0090068 GO:0090304 GO:0140096 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575 GO:1901987 GO:1901988 GO:1901990 GO:1901991 GO:1902400 GO:1902402 GO:1902403 GO:1902806 GO:1902807 GO:1903047 GO:1903706 GO:2000026 GO:2000045 GO:2000134
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
RRM_1 zf-RING_4

Protein Analysis

773

Amino Acids

84.69

Weight (kDa)

5.6

Isoelectric Point (pI)

59.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 469
Acc36I ACCTGC 1 cut(s) 469
AccB1I GGYRCC 1 cut(s) 1366
AccB7I CCANNNNNTGG 1 cut(s) 1359
AccI GTMKAC 1 cut(s) 1215
AccII CGCG 1 cut(s) 133
AciI CCGC 2 cut(s) 1462, 2187
AclWI GGATC 5 cut(s) 1838, 1851, 1908, 1974, 2082
AcoI YGGCCR 2 cut(s) 250, 2155
AcsI RAATTY 4 cut(s) 142, 628, 1084, 1297
AcuI CTGAAG 2 cut(s) 660, 1946
AfaI GTAC 4 cut(s) 130, 849, 1062, 1570
AfiI CCNNNNNNNGG 7 cut(s) 80, 968, 1359, 1696, 1697, 2018, 2288
AflIII ACRYGT 1 cut(s) 131
AgsI TTSAA 8 cut(s) 141, 177, 298, 990, 1047, 1577, 1641, 1946
AhdI GACNNNNNGTC 1 cut(s) 1741
AjnI CCWGG 4 cut(s) 252, 1152, 1476, 1897
AleI CACNNNNGTG 1 cut(s) 366
AloI GAACNNNNNNTCC 2 cut(s) 2269, 2301
Alw21I GWGCWC 3 cut(s) 620, 1342, 2214
Alw26I GTCTC 4 cut(s) 954, 1867, 2059, 2221
AlwI GGATC 5 cut(s) 1838, 1851, 1908, 1974, 2082
Ama87I CYCGRG 1 cut(s) 702
AoxI GGCC 4 cut(s) 250, 287, 1686, 2155
ApaI GGGCCC 1 cut(s) 1690
ApeKI GCWGC 9 cut(s) 113, 116, 236, 404, 496, 529, 1095, 1187, 1230
ApoI RAATTY 4 cut(s) 142, 628, 1084, 1297
Asp700I GAANNNNTTC 1 cut(s) 2059
AspLEI GCGC 1 cut(s) 898
AspS9I GGNCC 5 cut(s) 706, 877, 1686, 1687, 2142
AsuC2I CCSGG 3 cut(s) 881, 1665, 1698
AsuHPI GGTGA 2 cut(s) 1193, 1328
AvaI CYCGRG 1 cut(s) 702
AvaII GGWCC 3 cut(s) 706, 877, 2142
AxyI CCTNAGG 1 cut(s) 2003
BaeGI GKGCMC 1 cut(s) 1690
BalI TGGCCA 2 cut(s) 252, 2157
BamHI GGATCC 1 cut(s) 1843
BanI GGYRCC 1 cut(s) 1366
BanII GRGCYC 4 cut(s) 1342, 1648, 1690, 2214
BbsI GAAGAC 2 cut(s) 309, 2052
Bbv12I GWGCWC 3 cut(s) 620, 1342, 2214
BbvCI CCTCAGC 1 cut(s) 1797
BbvI GCAGC 9 cut(s) 100, 128, 223, 391, 508, 541, 1107, 1199, 1242
BccI CCATC 3 cut(s) 1506, 2018, 2159
BceAI ACGGC 1 cut(s) 883
BciT130I CCWGG 4 cut(s) 254, 1154, 1478, 1899
BciVI GTATCC 2 cut(s) 2019, 2228
BclI TGATCA 1 cut(s) 640
BcnI CCSGG 3 cut(s) 881, 1665, 1698
BcoDI GTCTC 4 cut(s) 954, 1867, 2059, 2221
BfaI CTAG 6 cut(s) 819, 945, 963, 1416, 1566, 2231
BfmI CTRYAG 5 cut(s) 114, 261, 1212, 1436, 1632
BfuAI ACCTGC 1 cut(s) 469
BfuI GTATCC 2 cut(s) 2019, 2228
BglII AGATCT 1 cut(s) 95
BisI GCNGC 9 cut(s) 114, 117, 237, 405, 497, 530, 1096, 1188, 1231
BlsI GCNGC 9 cut(s) 115, 118, 238, 406, 498, 531, 1097, 1189, 1232
BmcAI AGTACT 1 cut(s) 1570
Bme1390I CCNGG 7 cut(s) 254, 881, 1154, 1478, 1665, 1698, 1899
Bme18I GGWCC 3 cut(s) 706, 877, 2142
BmeRI GACNNNNNGTC 1 cut(s) 1741
BmeT110I CYCGRG 1 cut(s) 702
BmgT120I GGNCC 5 cut(s) 706, 877, 1686, 1687, 2142
BmiI GGNNCC 7 cut(s) 55, 707, 879, 1368, 1688, 1689, 1845
BmrFI CCNGG 7 cut(s) 254, 881, 1154, 1478, 1665, 1698, 1899
BmrI ACTGGG 1 cut(s) 2277
BmsI GCATC 6 cut(s) 265, 473, 1174, 1942, 1962, 2268
BmuI ACTGGG 1 cut(s) 2277
BpiI GAAGAC 2 cut(s) 309, 2052
BpmI CTGGAG 1 cut(s) 1356
Bpu10I CCTNAGC 1 cut(s) 1797
BpuEI CTTGAG 2 cut(s) 857, 1695
BpuMI CCSGG 3 cut(s) 881, 1665, 1698
BsaI GGTCTC 1 cut(s) 954
BsaJI CCNNGG 7 cut(s) 468, 701, 709, 1153, 1489, 1803, 1897
BsaWI WCCGGW 2 cut(s) 334, 1057
BsaXI ACNNNNNCTCC 2 cut(s) 2103, 2133
Bsc4I CCNNNNNNNGG 7 cut(s) 80, 968, 1359, 1696, 1697, 2018, 2288
Bse1I ACTGG 5 cut(s) 55, 253, 797, 1353, 2283
Bse21I CCTNAGG 1 cut(s) 2003
BseBI CCWGG 4 cut(s) 254, 1154, 1478, 1899
BseDI CCNNGG 7 cut(s) 468, 701, 709, 1153, 1489, 1803, 1897
BseGI GGATG 7 cut(s) 464, 850, 1279, 2029, 2170, 2283, 2322
BseLI CCNNNNNNNGG 7 cut(s) 80, 968, 1359, 1696, 1697, 2018, 2288
BseMII CTCAG 7 cut(s) 753, 822, 1355, 1460, 1811, 2096, 2207
BseNI ACTGG 5 cut(s) 55, 253, 797, 1353, 2283
BseRI GAGGAG 4 cut(s) 63, 854, 1650, 1759
BseSI GKGCMC 1 cut(s) 1690
BseXI GCAGC 9 cut(s) 100, 128, 223, 391, 508, 541, 1107, 1199, 1242
BsgI GTGCAG 2 cut(s) 390, 999
Bsh1236I CGCG 1 cut(s) 133
BshFI GGCC 4 cut(s) 252, 289, 1688, 2157
BshNI GGYRCC 1 cut(s) 1366
BsiHKAI GWGCWC 3 cut(s) 620, 1342, 2214
BsiHKCI CYCGRG 1 cut(s) 702
BsiSI CCGG 5 cut(s) 335, 881, 1058, 1664, 1697
BslFI GGGAC 2 cut(s) 719, 1040
BslI CCNNNNNNNGG 7 cut(s) 80, 968, 1359, 1696, 1697, 2018, 2288
BsmAI GTCTC 4 cut(s) 954, 1867, 2059, 2221
BsmFI GGGAC 2 cut(s) 719, 1040
BsmI GAATGC 1 cut(s) 1126
BsnI GGCC 4 cut(s) 252, 289, 1688, 2157
Bso31I GGTCTC 1 cut(s) 954
BsoBI CYCGRG 1 cut(s) 702
Bsp120I GGGCCC 1 cut(s) 1686
Bsp1286I GDGCHC 5 cut(s) 620, 1342, 1648, 1690, 2214
Bsp143I GATC 9 cut(s) 95, 640, 997, 1432, 1843, 1913, 1979, 2074, 2293
BspACI CCGC 2 cut(s) 1462, 2187
BspANI GGCC 4 cut(s) 252, 289, 1688, 2157
BspCNI CTCAG 7 cut(s) 754, 823, 1354, 1459, 1810, 2095, 2208
BspFNI CGCG 1 cut(s) 133
BspHI TCATGA 1 cut(s) 547
BspLI GGNNCC 7 cut(s) 55, 707, 879, 1368, 1688, 1689, 1845
BspMAI CTGCAG 2 cut(s) 118, 1636
BspMI ACCTGC 1 cut(s) 469
BspPI GGATC 5 cut(s) 1838, 1851, 1908, 1974, 2082
BspQI GCTCTTC 2 cut(s) 111, 1105
BspT107I GGYRCC 1 cut(s) 1366
BspTNI GGTCTC 1 cut(s) 954
BsrI ACTGG 5 cut(s) 55, 253, 797, 1353, 2283
BssECI CCNNGG 7 cut(s) 468, 701, 709, 1153, 1489, 1803, 1897
BssMI GATC 9 cut(s) 95, 640, 997, 1432, 1843, 1913, 1979, 2074, 2293
BssT1I CCWWGG 3 cut(s) 468, 709, 1489
Bst2UI CCWGG 4 cut(s) 254, 1154, 1478, 1899
Bst4CI ACNGT 7 cut(s) 208, 220, 308, 1332, 1440, 1743, 1932
Bst6I CTCTTC 3 cut(s) 111, 1105, 1621
BstC8I GCNNGC 2 cut(s) 321, 2089
BstDEI CTNAG 8 cut(s) 762, 831, 1341, 1446, 1797, 2003, 2082, 2216
BstDSI CCRYGG 1 cut(s) 1803
BstEII GGTNACC 1 cut(s) 1073
BstF5I GGATG 7 cut(s) 464, 850, 1279, 2029, 2170, 2283, 2322
BstFNI CGCG 1 cut(s) 133
BstHHI GCGC 1 cut(s) 898
BstKTI GATC 9 cut(s) 98, 643, 1000, 1435, 1846, 1916, 1982, 2077, 2296
BstMAI GTCTC 4 cut(s) 954, 1867, 2059, 2221
BstMBI GATC 9 cut(s) 95, 640, 997, 1432, 1843, 1913, 1979, 2074, 2293
BstMWI GCNNNNNNNGC 5 cut(s) 110, 1123, 1856, 1885, 1972
BstNI CCWGG 4 cut(s) 254, 1154, 1478, 1899
BstPI GGTNACC 1 cut(s) 1073
BstSCI CCNGG 7 cut(s) 252, 879, 1152, 1476, 1663, 1696, 1897
BstSFI CTRYAG 5 cut(s) 114, 261, 1212, 1436, 1632
BstSLI GKGCMC 1 cut(s) 1690
BstUI CGCG 1 cut(s) 133
BstV1I GCAGC 9 cut(s) 100, 128, 223, 391, 508, 541, 1107, 1199, 1242
BstV2I GAAGAC 2 cut(s) 309, 2052
BstX2I RGATCY 4 cut(s) 95, 1843, 1913, 1979
BstXI CCANNNNNNTGG 2 cut(s) 1312, 2165
BstYI RGATCY 4 cut(s) 95, 1843, 1913, 1979
Bsu36I CCTNAGG 1 cut(s) 2003
BsuI GTATCC 2 cut(s) 2019, 2228
BsuRI GGCC 4 cut(s) 252, 289, 1688, 2157
BtgI CCRYGG 1 cut(s) 1803
BtgZI GCGATG 2 cut(s) 288, 1272
BtsCI GGATG 7 cut(s) 464, 850, 1279, 2029, 2170, 2283, 2322
BtsI GCAGTG 1 cut(s) 507
BtsIMutI CAGTG 5 cut(s) 225, 341, 507, 618, 1739
BveI ACCTGC 1 cut(s) 469
Cac8I GCNNGC 2 cut(s) 321, 2089
CciI TCATGA 1 cut(s) 547
CfoI GCGC 1 cut(s) 898
Cfr13I GGNCC 5 cut(s) 706, 877, 1686, 1687, 2142
Csp6I GTAC 4 cut(s) 129, 848, 1061, 1569
CviQI GTAC 4 cut(s) 129, 848, 1061, 1569
DdeI CTNAG 8 cut(s) 762, 831, 1341, 1446, 1797, 2003, 2082, 2216
DpnI GATC 9 cut(s) 97, 642, 999, 1434, 1845, 1915, 1981, 2076, 2295
DpnII GATC 9 cut(s) 95, 640, 997, 1432, 1843, 1913, 1979, 2074, 2293
DriI GACNNNNNGTC 1 cut(s) 1741
EaeI YGGCCR 2 cut(s) 250, 2155
Eam1104I CTCTTC 3 cut(s) 111, 1105, 1621
Eam1105I GACNNNNNGTC 1 cut(s) 1741
EarI CTCTTC 3 cut(s) 111, 1105, 1621
Ecl136II GAGCTC 2 cut(s) 1340, 2212
Eco130I CCWWGG 3 cut(s) 468, 709, 1489
Eco24I GRGCYC 4 cut(s) 1342, 1648, 1690, 2214
Eco31I GGTCTC 1 cut(s) 954
Eco47I GGWCC 3 cut(s) 706, 877, 2142
Eco53kI GAGCTC 2 cut(s) 1340, 2212
Eco57I CTGAAG 2 cut(s) 660, 1946
Eco81I CCTNAGG 1 cut(s) 2003
Eco88I CYCGRG 1 cut(s) 702
Eco91I GGTNACC 1 cut(s) 1073
EcoICRI GAGCTC 2 cut(s) 1340, 2212
EcoO109I RGGNCCY 3 cut(s) 877, 1686, 1687
EcoO65I GGTNACC 1 cut(s) 1073
EcoRII CCWGG 4 cut(s) 252, 1152, 1476, 1897
EcoT14I CCWWGG 3 cut(s) 468, 709, 1489
EcoT38I GRGCYC 4 cut(s) 1342, 1648, 1690, 2214
ErhI CCWWGG 3 cut(s) 468, 709, 1489
FalI AAGNNNNNCTT 6 cut(s) 1084, 1116, 1378, 1410, 1872, 1904
FaqI GGGAC 2 cut(s) 719, 1040
FauNDI CATATG 1 cut(s) 1429
FbaI TGATCA 1 cut(s) 640
FblI GTMKAC 1 cut(s) 1215
Fnu4HI GCNGC 9 cut(s) 114, 117, 237, 405, 497, 530, 1096, 1188, 1231
FokI GGATG 6 cut(s) 451, 857, 1286, 2036, 2177, 2290
FriOI GRGCYC 4 cut(s) 1342, 1648, 1690, 2214
Fsp4HI GCNGC 9 cut(s) 114, 117, 237, 405, 497, 530, 1096, 1188, 1231
FspBI CTAG 6 cut(s) 819, 945, 963, 1416, 1566, 2231
GlaI GCGC 1 cut(s) 897
GluI GCNGC 9 cut(s) 114, 117, 237, 405, 497, 530, 1096, 1188, 1231
GsuI CTGGAG 1 cut(s) 1356
HaeIII GGCC 4 cut(s) 252, 289, 1688, 2157
HapII CCGG 5 cut(s) 335, 881, 1058, 1664, 1697
HhaI GCGC 1 cut(s) 898
Hin6I GCGC 1 cut(s) 896
HinP1I GCGC 1 cut(s) 896
HindIII AAGCTT 3 cut(s) 417, 589, 1625
HpaII CCGG 5 cut(s) 335, 881, 1058, 1664, 1697
HphI GGTGA 2 cut(s) 1193, 1328
Hpy166II GTNNAC 3 cut(s) 332, 458, 1216
Hpy8I GTNNAC 3 cut(s) 332, 458, 1216
HpyAV CCTTC 4 cut(s) 1357, 1621, 1935, 1993
HpyCH4III ACNGT 7 cut(s) 208, 220, 308, 1332, 1440, 1743, 1932
HpyF10VI GCNNNNNNNGC 5 cut(s) 110, 1123, 1856, 1885, 1972
HpyF3I CTNAG 8 cut(s) 762, 831, 1341, 1446, 1797, 2003, 2082, 2216
HspAI GCGC 1 cut(s) 896
Ksp22I TGATCA 1 cut(s) 640
Kzo9I GATC 9 cut(s) 95, 640, 997, 1432, 1843, 1913, 1979, 2074, 2293
LguI GCTCTTC 2 cut(s) 111, 1105
LmnI GCTCC 5 cut(s) 602, 1123, 1337, 1663, 2217
Lsp1109I GCAGC 9 cut(s) 100, 128, 223, 391, 508, 541, 1107, 1199, 1242
LweI GCATC 6 cut(s) 265, 473, 1174, 1942, 1962, 2268
MaeI CTAG 6 cut(s) 819, 945, 963, 1416, 1566, 2231
MaeIII GTNAC 6 cut(s) 714, 772, 804, 1073, 1467, 2189
MalI GATC 9 cut(s) 97, 642, 999, 1434, 1845, 1915, 1981, 2076, 2295
MboI GATC 9 cut(s) 95, 640, 997, 1432, 1843, 1913, 1979, 2074, 2293
MfeI CAATTG 1 cut(s) 211
MflI RGATCY 4 cut(s) 95, 1843, 1913, 1979
MhlI GDGCHC 5 cut(s) 620, 1342, 1648, 1690, 2214
MlsI TGGCCA 2 cut(s) 252, 2157
MluI ACGCGT 1 cut(s) 131
MluNI TGGCCA 2 cut(s) 252, 2157
MlyI GAGTC 4 cut(s) 812, 864, 898, 1730
MmeI TCCRAC 4 cut(s) 372, 813, 1941, 2146
Mox20I TGGCCA 2 cut(s) 252, 2157
MroXI GAANNNNTTC 1 cut(s) 2059
MscI TGGCCA 2 cut(s) 252, 2157
MseI TTAA 8 cut(s) 20, 63, 432, 611, 693, 1137, 1890, 1934
MslI CAYNNNNRTG 7 cut(s) 273, 366, 368, 552, 648, 2040, 2163
Msp20I TGGCCA 2 cut(s) 252, 2157
MspA1I CMGCKG 1 cut(s) 113
MspI CCGG 5 cut(s) 335, 881, 1058, 1664, 1697
MspR9I CCNGG 7 cut(s) 254, 881, 1154, 1478, 1665, 1698, 1899
MunI CAATTG 1 cut(s) 211
Mva1269I GAATGC 1 cut(s) 1126
MvaI CCWGG 4 cut(s) 254, 1154, 1478, 1899
MvnI CGCG 1 cut(s) 133
MwoI GCNNNNNNNGC 5 cut(s) 110, 1123, 1856, 1885, 1972
NciI CCSGG 3 cut(s) 881, 1665, 1698
NdeI CATATG 1 cut(s) 1429
NdeII GATC 9 cut(s) 95, 640, 997, 1432, 1843, 1913, 1979, 2074, 2293
NlaIV GGNNCC 7 cut(s) 55, 707, 879, 1368, 1688, 1689, 1845
NmuCI GTSAC 2 cut(s) 804, 1467
OliI CACNNNNGTG 1 cut(s) 366
PagI TCATGA 1 cut(s) 547
PaqCI CACCTGC 1 cut(s) 469
PciSI GCTCTTC 2 cut(s) 111, 1105
PctI GAATGC 1 cut(s) 1126
PdmI GAANNNNTTC 1 cut(s) 2059
PflMI CCANNNNNTGG 1 cut(s) 1359
PfoI TCCNGGA 1 cut(s) 1663
PkrI GCNGC 9 cut(s) 115, 118, 238, 406, 498, 531, 1097, 1189, 1232
PleI GAGTC 4 cut(s) 811, 864, 897, 1730
PpsI GAGTC 4 cut(s) 811, 864, 897, 1730
PpuMI RGGWCCY 1 cut(s) 877
Psp124BI GAGCTC 2 cut(s) 1342, 2214
Psp5II RGGWCCY 1 cut(s) 877
Psp6I CCWGG 4 cut(s) 252, 1152, 1476, 1897
PspEI GGTNACC 1 cut(s) 1073
PspGI CCWGG 4 cut(s) 252, 1152, 1476, 1897
PspN4I GGNNCC 7 cut(s) 55, 707, 879, 1368, 1688, 1689, 1845
PspOMI GGGCCC 1 cut(s) 1686
PspPI GGNCC 5 cut(s) 706, 877, 1686, 1687, 2142
PspPPI RGGWCCY 1 cut(s) 877
PsrI GAACNNNNNNTAC 2 cut(s) 121, 153
PstI CTGCAG 2 cut(s) 118, 1636
PsuI RGATCY 4 cut(s) 95, 1843, 1913, 1979
PvuII CAGCTG 1 cut(s) 113
RsaI GTAC 4 cut(s) 130, 849, 1062, 1570
RsaNI GTAC 4 cut(s) 129, 848, 1061, 1569
RseI CAYNNNNRTG 7 cut(s) 273, 366, 368, 552, 648, 2040, 2163
SacI GAGCTC 2 cut(s) 1342, 2214
SapI GCTCTTC 2 cut(s) 111, 1105
SaqAI TTAA 8 cut(s) 20, 63, 432, 611, 693, 1137, 1890, 1934
SatI GCNGC 9 cut(s) 114, 117, 237, 405, 497, 530, 1096, 1188, 1231
Sau3AI GATC 9 cut(s) 95, 640, 997, 1432, 1843, 1913, 1979, 2074, 2293
Sau96I GGNCC 5 cut(s) 706, 877, 1686, 1687, 2142
ScaI AGTACT 1 cut(s) 1570
SchI GAGTC 4 cut(s) 812, 864, 898, 1730
ScrFI CCNGG 7 cut(s) 254, 881, 1154, 1478, 1665, 1698, 1899
SduI GDGCHC 5 cut(s) 620, 1342, 1648, 1690, 2214
SfaNI GCATC 6 cut(s) 265, 473, 1174, 1942, 1962, 2268
SfcI CTRYAG 5 cut(s) 114, 261, 1212, 1436, 1632
SinI GGWCC 3 cut(s) 706, 877, 2142
SmiMI CAYNNNNRTG 7 cut(s) 273, 366, 368, 552, 648, 2040, 2163
SmlI CTYRAG 2 cut(s) 872, 1710
SmoI CTYRAG 2 cut(s) 872, 1710
SsiI CCGC 2 cut(s) 1462, 2187
SspI AATATT 2 cut(s) 725, 1813
SspMI CTAG 6 cut(s) 819, 945, 963, 1416, 1566, 2231
SstI GAGCTC 2 cut(s) 1342, 2214
StyD4I CCNGG 7 cut(s) 252, 879, 1152, 1476, 1663, 1696, 1897
StyI CCWWGG 3 cut(s) 468, 709, 1489
TaaI ACNGT 7 cut(s) 208, 220, 308, 1332, 1440, 1743, 1932
TaqI TCGA 3 cut(s) 1168, 1519, 2063
TaqII GACCGA 1 cut(s) 2130
TatI WGTACW 2 cut(s) 847, 1568
Tru1I TTAA 8 cut(s) 20, 63, 432, 611, 693, 1137, 1890, 1934
Tru9I TTAA 8 cut(s) 20, 63, 432, 611, 693, 1137, 1890, 1934
TscAI CASTG 5 cut(s) 225, 348, 514, 625, 1746
TseFI GTSAC 2 cut(s) 804, 1467
TseI GCWGC 9 cut(s) 113, 116, 236, 404, 496, 529, 1095, 1187, 1230
Tsp45I GTSAC 2 cut(s) 804, 1467
TspDTI ATGAA 7 cut(s) 315, 429, 564, 588, 1119, 1161, 2274
TspGWI ACGGA 2 cut(s) 195, 942
TspRI CASTG 5 cut(s) 225, 348, 514, 625, 1746
Van91I CCANNNNNTGG 1 cut(s) 1359
VpaK11BI GGWCC 3 cut(s) 706, 877, 2142
XapI RAATTY 4 cut(s) 142, 628, 1084, 1297
XbaI TCTAGA 1 cut(s) 1415
XmiI GTMKAC 1 cut(s) 1215
XmnI GAANNNNTTC 1 cut(s) 2059
XspI CTAG 6 cut(s) 819, 945, 963, 1416, 1566, 2231
ZrmI AGTACT 1 cut(s) 1570
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.