Prupe.6G091300_v2.0.a1

RING/Ubox like zinc-binding domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0001311
Physical Location & Seq
Reverse (-)
6254950 .. 6264501
9552 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G091300.3

Sequence Viewer

Length: 3138 bp
ATGAGTGACCAGGGAGAAAAGACTTGTCCTCTTTGCGCGGAGGAGATGGATTTGACAGATCAGCAATTGAAGCCATGTAAATGCGGTTATGAGATATGTGTTTGGTGTTGGCACCACATAATGGACATGGCTGAGAAGGATGAGACAGAGGGGCGGTGTCCTGCATGCCGCACTCCTTATGATAAGGAAAAGATTGTAGGGACGGCTGGAAAGTGCGAGAGATTGGTGGCTGAAATCAATACCGAGAAAAAGATGAAGTCTCAGAAGGCAAAGGTTAAATCGACTGAAGGACGGAAGCAGCTCAGCAGTGTGCGAGTGATTCAAAGGAACCTTGTTTACATAGTTGGGTTGCCTCTTAATCTGGCAGATGAAGATCTTCTGCAGCGCAGAGAATATTTTGGTCAGTATGGGAAGGTTTTAAAAGTTTCTATGTCCCGAACTGCAGCTGGTATCATTCAGCAATTTCCAAACAATACATGTAGTGTATATATTACTTACTCGAAAGAAGAGGAAGCGGTTCGTTGTATTCAAAATGTACATGGGTTCCTCTTGGATGGTAGATCGCTGAGGGCATGCTTCGGGACCACAAAGTATTGTCATGCATGGCTGAGAAATGTGCCTTGCACCAATCCTGATTGTTTGTATCTGCATGAGGTTGGGTCTCAGGAGGACAGTTTCACTAAAGATGAAATAATTTCTGCATACACTAGGAGTAGGGTACAACAAATTACCGGTACTGCAAACAGTATGCAACGGCGTTCAGGGAGTGTTTTGCCTCCACCACTAGATGATTATTGTAACAGCAGTTCTACTTCTGCTGGAGGACCAATTATTAAAAATGGTTCTAGTAATACTGGAAGCCTTCTTAGAGGTTCTCCTCCAAATGGAAGCTCTGGTAGATCTATTGCTCTTCCAGCTGCAGCCTCATGGGGAACACGTGGTTCAAATTGCCAACCACCAGCTACAAATATAATAAATTCGAATGGACATACTAAACAGAAACCTGATGTCAATTGCACATTGCCATTTTCTTCAGCAGCGGTTGCTACTACTCAGGCTTCTATACTGCATAGTGATGCAGGAAAGAGGTCAGCATTAAATGATGAAAGTCAGACTATGCATGCTAAAGGTAAACCAGAATCATTGAAGATTGTGAGACAGAATAGTGGCGTGGATTGTCAGAATGACCTGTCTGACGAACCTGCTGCACCCGATGAAGCTCCTGCTTCTGTGAATGGGAGCAGCCCTTTATCTTCCCCCCAAACAACCAAGGATAATGATAGAGATAGCAGCATGCAGCCAAGCATCAGCAATGCCACCAACCATAGTCATCTATCTTACAGTTCCTGTCATGAAAATGAAAACCTTGTTTCCACTGAAGAAGTGGTCCAAAGCATATGCTCTGATATGCCTTTGATGGGCATTGATAGAAATTCCATGGTAGAACATTCTGGTGTAGTCAGATCTAATAGTTCACTTTCTGATAATTCTGTGATTAAATCGCCTCGGAACCAAGGGTTACAGCAATACTGTGCTGAGCAGTCCAGAGAACCTCCAATAACTGCTGTGACAGCTGTTAATGCAGTGTGTGTTACAAGGGAACAATCCAACTGGATATCAGAGTCACAAGCACAACTAGTACCAAATGCATCTTCTGAGGTGGAAGAGGATGTACTATCTTTCGACAATCAGAGACTCAAGGATCCAGAAGTGAGTCGTTCAACATATTTGCCTAGTTTGGCTAATGCGGTCCATGTTTCAAATCATTCTAGGTCTCCATTGCTGCATAGTGAAGCTTATGGTGCAGTTTATTCAAATGTTGATCGTCCATTTGTTGATAACAAAATGAGGGACAGTTCACTTCTATCTTCATCCAGTATTTCAGTAACATCTAATGGTTACCCTGAGAACTTGGTAAGCAGATCTTCTGGTTCAGAGAGGCCGTTGGAGCATTCCTTTCTGCTTCCAAATGAAGGCCCAGGGAAGCACAGTGGAAGATTCCTGGATGATGCAGCTAATGCGGATTTCAGTGCTGCTGTTGACAAGGGAGAGAGTAGCATAATCTCAAATATATTATCAATGGACTTTGACACTTGGGATGACTCAATAGCGTCACCACAGCATTTTTCGAAATTATTGGGTGAAACTGATAGACAGCCTGGAGCTCTCAAAATGTCAAGTCCTTGGAAAGTACAAAATAACAATCAGTCCAGATTCTCTTTTGCAAGACAGGAGGATTCTAAAAATCAAGCATTCGATGTACAGTCATCTCCGAATGTCGTTGGGCAGTTTTCTAATAACCAATCATTCCACCATGGTTTTTCTGAAAATAGAGATTTAGGTTTGGAGAATCTTGGAATTGGAAACGGTTTTTCATCTAGCTCTTATGAAGAACCTGAAAATCATGGCAGCAATCATTTAGCTTTTTCTTCTAACAAGCTTTCTGTGGTTTCAAGGGCTCAAATTTCTGCTCCTCCTGGATTCTCTGTGCCAAGCAGGGCACCACCACCAGGCTTTACTTCTCATGAGAGAGTGGATCAGGAGTTTGACTCTCTGGCTGGGAATCATTTGTATGATACTTCCCCATTGTTGAGAAATGCATATCAACCTCAGGCAACTGGTAATATTGGTAGCTCTGGGGACATTGAGTTTATGGATCCTGCTATATTGGCGGTCGGTAAAGGGCGACTGCAAGGTGGGCTTAACAACCCCGGCCTTGAAATGAGATCAAACTTCCCTTCACAGTTAAGTGCCTATGAAAATGATGCAAGGCTTCAACTGTTGATGCAAAGATCCCTCACCCCACAACAAAACGTTAGATTTCCTGATTTCGGCGATGGTTTTTCTCACGTCAATGATTCTTATGGAATTTCTTCGATGCTTTTGGATCAATCTCAGACTAGCAGCAATCTATCCCCTTTTTCTCAATTGTCCCTCCAACAACAGTCTAGAAACCGGGTCATGTCAAATGGTCACTGGGATGGGTGGAATGAGGCTCAGGGTGGAAGCACTCTGGGTATGGCAGAGCTCTTGAGAAATGATAGACTAGGGTTCAACAAGTATTATTCTGGTTATGAAGATTCAAAGTTTCGGATGCCCAGTTCTGGTGATCTGTATAACAGAACATTTGGGATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000075 GO:0000077 GO:0000278 GO:0000288 GO:0000289 GO:0000956 GO:0002682 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006401 GO:0006402 GO:0006464 GO:0006508 GO:0006511 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006977 GO:0007049 GO:0007093 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010564 GO:0010605 GO:0010629 GO:0010948 GO:0016070 GO:0016071 GO:0016567 GO:0016740 GO:0019222 GO:0019439 GO:0019538 GO:0019787 GO:0019941 GO:0022402 GO:0023052 GO:0030163 GO:0030330 GO:0031570 GO:0031571 GO:0032446 GO:0033554 GO:0034641 GO:0034655 GO:0035556 GO:0036211 GO:0042770 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0044773 GO:0044774 GO:0044783 GO:0044819 GO:0045595 GO:0045637 GO:0045652 GO:0045786 GO:0045787 GO:0045930 GO:0046483 GO:0046700 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051603 GO:0051716 GO:0051726 GO:0051865 GO:0060255 GO:0065007 GO:0070647 GO:0071156 GO:0071158 GO:0071704 GO:0072331 GO:0072395 GO:0072401 GO:0072413 GO:0072422 GO:0072431 GO:0090068 GO:0090304 GO:0140096 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575 GO:1901987 GO:1901988 GO:1901990 GO:1901991 GO:1902400 GO:1902402 GO:1902403 GO:1902806 GO:1902807 GO:1903047 GO:1903706 GO:2000026 GO:2000045 GO:2000134
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
RRM_1 zf-RING_4

Protein Analysis

1046

Amino Acids

114.2

Weight (kDa)

5.67

Isoelectric Point (pI)

56.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1210
AccB1I GGYRCC 2 cut(s) 111, 2500
AccB7I CCANNNNNTGG 1 cut(s) 121
AccII CGCG 1 cut(s) 38
AciI CCGC 9 cut(s) 38, 84, 154, 169, 515, 1040, 1748, 2021, 2672
AclI AACGTT 1 cut(s) 2814
AclWI GGATC 7 cut(s) 1697, 1710, 2544, 2651, 2664, 2787, 2895
AcsI RAATTY 4 cut(s) 976, 1432, 2463, 2868
AcuI CTGAAG 3 cut(s) 306, 1017, 1398
AcvI CACGTG 1 cut(s) 938
AfaI GTAC 7 cut(s) 537, 720, 736, 1641, 1674, 2193, 2262
AfiI CCNNNNNNNGG 7 cut(s) 121, 884, 1418, 1973, 2510, 2831, 3104
AflIII ACRYGT 2 cut(s) 476, 935
AgeI ACCGGT 1 cut(s) 731
AhlI ACTAGT 1 cut(s) 1636
AjiI CACGTC 1 cut(s) 2851
AjnI CCWGG 6 cut(s) 9, 1978, 2001, 2158, 2476, 2509
AjuI GAANNNNNNNTTGG 2 cut(s) 1636, 1668
AloI GAACNNNNNNTCC 2 cut(s) 3085, 3117
Alw21I GWGCWC 2 cut(s) 2167, 3030
Alw26I GTCTC 6 cut(s) 137, 264, 666, 1150, 1687, 1779
AlwI GGATC 7 cut(s) 1697, 1710, 2544, 2651, 2664, 2787, 2895
AlwNI CAGNNNCTG 1 cut(s) 1347
AoxI GGCC 3 cut(s) 1940, 1975, 2713
ApoI RAATTY 4 cut(s) 976, 1432, 2463, 2868
AsiGI ACCGGT 1 cut(s) 731
Asp700I GAANNNNTTC 3 cut(s) 375, 516, 2872
AspLEI GCGC 2 cut(s) 38, 387
AspS9I GGNCC 5 cut(s) 582, 824, 1387, 1750, 1976
AsuC2I CCSGG 2 cut(s) 2712, 2957
AsuHPI GGTGA 4 cut(s) 2106, 2153, 2791, 3119
AsuII TTCGAA 2 cut(s) 980, 2129
AvaII GGWCC 4 cut(s) 582, 824, 1387, 1750
AxyI CCTNAGG 1 cut(s) 2610
BaeGI GKGCMC 1 cut(s) 2503
BamHI GGATCC 2 cut(s) 1702, 2656
BanI GGYRCC 2 cut(s) 111, 2500
BanII GRGCYC 3 cut(s) 2167, 2461, 3030
BarI GAAGNNNNNNTAC 2 cut(s) 1656, 1688
BbrPI CACGTG 1 cut(s) 938
Bbv12I GWGCWC 2 cut(s) 2167, 3030
BbvCI CCTCAGC 1 cut(s) 566
BccI CCATC 5 cut(s) 40, 548, 1411, 2831, 2975
BceAI ACGGC 3 cut(s) 219, 770, 1927
BcgI CGANNNNNNTGC 2 cut(s) 1187, 1221
BciT130I CCWGG 6 cut(s) 11, 1980, 2003, 2160, 2478, 2511
BcnI CCSGG 2 cut(s) 2712, 2957
BcoDI GTCTC 6 cut(s) 137, 264, 666, 1150, 1687, 1779
BcuI ACTAGT 1 cut(s) 1636
BfmI CTRYAG 3 cut(s) 380, 441, 918
BfuAI ACCTGC 1 cut(s) 1210
BglII AGATCT 4 cut(s) 373, 899, 1463, 1922
BlpI GCTNAGC 2 cut(s) 302, 1536
Bme1390I CCNGG 8 cut(s) 11, 1980, 2003, 2160, 2478, 2511, 2712, 2957
Bme18I GGWCC 4 cut(s) 582, 824, 1387, 1750
BmgBI CACGTC 1 cut(s) 2851
BmgT120I GGNCC 5 cut(s) 582, 824, 1387, 1750, 1976
BmiI GGNNCC 8 cut(s) 113, 329, 545, 583, 1511, 1704, 2502, 2658
BmrFI CCNGG 8 cut(s) 11, 1980, 2003, 2160, 2478, 2511, 2712, 2957
BmrI ACTGGG 2 cut(s) 2986, 3093
BmsI GCATC 8 cut(s) 1066, 1314, 1658, 1999, 2755, 2775, 2868, 3084
BmuI ACTGGG 2 cut(s) 2986, 3093
BplI GAGNNNNNCTC 2 cut(s) 2534, 2566
BpmI CTGGAG 2 cut(s) 840, 2181
Bpu10I CCTNAGC 2 cut(s) 566, 2997
Bpu1102I GCTNAGC 2 cut(s) 302, 1536
Bpu14I TTCGAA 2 cut(s) 980, 2129
BpuEI CTTGAG 2 cut(s) 1682, 3052
BpuMI CCSGG 2 cut(s) 2712, 2957
BsaAI YACGTR 1 cut(s) 938
BsaBI GATNNNNATC 1 cut(s) 372
BsaI GGTCTC 2 cut(s) 666, 1779
BsaWI WCCGGW 1 cut(s) 731
Bsc4I CCNNNNNNNGG 7 cut(s) 121, 884, 1418, 1973, 2510, 2831, 3104
Bse118I RCCGGY 1 cut(s) 731
Bse1I ACTGG 6 cut(s) 859, 1616, 1875, 2623, 2981, 3099
Bse21I CCTNAGG 1 cut(s) 2610
Bse3DI GCAATG 3 cut(s) 1019, 1318, 1778
Bse8I GATNNNNATC 1 cut(s) 372
BseBI CCWGG 6 cut(s) 11, 1980, 2003, 2160, 2478, 2511
BseGI GGATG 9 cut(s) 145, 559, 1675, 1871, 2011, 2104, 2986, 3099, 3138
BseJI GATNNNNATC 1 cut(s) 372
BseLI CCNNNNNNNGG 7 cut(s) 121, 884, 1418, 1973, 2510, 2831, 3104
BseMI GCAATG 3 cut(s) 1019, 1318, 1778
BseNI ACTGG 6 cut(s) 859, 1616, 1875, 2623, 2981, 3099
BseRI GAGGAG 3 cut(s) 56, 867, 2463
BseSI GKGCMC 1 cut(s) 2503
BseYI CCCAGC 1 cut(s) 2558
BsgI GTGCAG 2 cut(s) 1191, 1824
Bsh1236I CGCG 1 cut(s) 38
Bsh1285I CGRYCG 1 cut(s) 2676
BshFI GGCC 3 cut(s) 1942, 1977, 2715
BshNI GGYRCC 2 cut(s) 111, 2500
BshTI ACCGGT 1 cut(s) 731
BsiEI CGRYCG 1 cut(s) 2676
BsiHKAI GWGCWC 2 cut(s) 2167, 3030
BsiSI CCGG 3 cut(s) 732, 2712, 2956
BslFI GGGAC 6 cut(s) 214, 418, 595, 1865, 2654, 2917
BslI CCNNNNNNNGG 7 cut(s) 121, 884, 1418, 1973, 2510, 2831, 3104
BsmAI GTCTC 6 cut(s) 137, 264, 666, 1150, 1687, 1779
BsmFI GGGAC 6 cut(s) 214, 418, 595, 1865, 2654, 2917
BsmI GAATGC 2 cut(s) 1951, 2252
BsnI GGCC 3 cut(s) 1942, 1977, 2715
Bso31I GGTCTC 2 cut(s) 666, 1779
Bsp119I TTCGAA 2 cut(s) 980, 2129
Bsp1286I GDGCHC 4 cut(s) 2167, 2461, 2503, 3030
Bsp1407I TGTACA 2 cut(s) 535, 2260
Bsp1720I GCTNAGC 2 cut(s) 302, 1536
Bsp19I CCATGG 2 cut(s) 1437, 2314
BspACI CCGC 9 cut(s) 38, 84, 154, 169, 515, 1040, 1748, 2021, 2672
BspANI GGCC 3 cut(s) 1942, 1977, 2715
BspFNI CGCG 1 cut(s) 38
BspHI TCATGA 2 cut(s) 1351, 2524
BspLI GGNNCC 8 cut(s) 113, 329, 545, 583, 1511, 1704, 2502, 2658
BspMAI CTGCAG 3 cut(s) 384, 445, 922
BspMI ACCTGC 1 cut(s) 1210
BspPI GGATC 7 cut(s) 1697, 1710, 2544, 2651, 2664, 2787, 2895
BspQI GCTCTTC 1 cut(s) 915
BspT104I TTCGAA 2 cut(s) 980, 2129
BspT107I GGYRCC 2 cut(s) 111, 2500
BspTNI GGTCTC 2 cut(s) 666, 1779
BsrDI GCAATG 3 cut(s) 1019, 1318, 1778
BsrFI RCCGGY 1 cut(s) 731
BsrGI TGTACA 2 cut(s) 535, 2260
BsrI ACTGG 6 cut(s) 859, 1616, 1875, 2623, 2981, 3099
BssAI RCCGGY 1 cut(s) 731
BssT1I CCWWGG 5 cut(s) 1269, 1437, 1513, 2183, 2314
Bst2UI CCWGG 6 cut(s) 11, 1980, 2003, 2160, 2478, 2511
Bst6I CTCTTC 3 cut(s) 501, 915, 1659
BstAPI GCANNNNNTGC 2 cut(s) 1043, 2018
BstAUI TGTACA 2 cut(s) 535, 2260
BstBAI YACGTR 1 cut(s) 938
BstBI TTCGAA 2 cut(s) 980, 2129
BstC8I GCNNGC 4 cut(s) 166, 574, 1122, 1295
BstDSI CCRYGG 2 cut(s) 1437, 2314
BstEII GGTNACC 1 cut(s) 1898
BstF5I GGATG 9 cut(s) 145, 559, 1675, 1871, 2011, 2104, 2986, 3099, 3138
BstFNI CGCG 1 cut(s) 38
BstHHI GCGC 2 cut(s) 38, 387
BstMAI GTCTC 6 cut(s) 137, 264, 666, 1150, 1687, 1779
BstMCI CGRYCG 1 cut(s) 2676
BstNI CCWGG 6 cut(s) 11, 1980, 2003, 2160, 2478, 2511
BstNSI RCATGY 5 cut(s) 168, 480, 576, 1124, 1297
BstPI GGTNACC 1 cut(s) 1898
BstSCI CCNGG 8 cut(s) 9, 1978, 2001, 2158, 2476, 2509, 2710, 2955
BstSFI CTRYAG 3 cut(s) 380, 441, 918
BstSLI GKGCMC 1 cut(s) 2503
BstUI CGCG 1 cut(s) 38
BstX2I RGATCY 7 cut(s) 373, 899, 1463, 1702, 1922, 2656, 2792
BstYI RGATCY 7 cut(s) 373, 899, 1463, 1702, 1922, 2656, 2792
Bsu36I CCTNAGG 1 cut(s) 2610
BsuRI GGCC 3 cut(s) 1942, 1977, 2715
BtgI CCRYGG 2 cut(s) 1437, 2314
BtgZI GCGATG 1 cut(s) 2850
BtrI CACGTC 1 cut(s) 2851
BtsCI GGATG 9 cut(s) 145, 559, 1675, 1871, 2011, 2104, 2986, 3099, 3138
BtsI GCAGTG 2 cut(s) 313, 1590
BtsIMutI CAGTG 6 cut(s) 313, 1374, 1590, 1996, 2035, 2974
BveI ACCTGC 1 cut(s) 1210
Cac8I GCNNGC 4 cut(s) 166, 574, 1122, 1295
CaiI CAGNNNCTG 1 cut(s) 1347
CciI TCATGA 2 cut(s) 1351, 2524
CfoI GCGC 2 cut(s) 38, 387
Cfr10I RCCGGY 1 cut(s) 731
Cfr13I GGNCC 5 cut(s) 582, 824, 1387, 1750, 1976
CseI GACGC 1 cut(s) 2100
Csp6I GTAC 7 cut(s) 536, 719, 735, 1640, 1673, 2192, 2261
CspAI ACCGGT 1 cut(s) 731
CviQI GTAC 7 cut(s) 536, 719, 735, 1640, 1673, 2192, 2261
DraI TTTAAA 1 cut(s) 420
Eam1104I CTCTTC 3 cut(s) 501, 915, 1659
EarI CTCTTC 3 cut(s) 501, 915, 1659
Ecl136II GAGCTC 2 cut(s) 2165, 3028
Eco130I CCWWGG 5 cut(s) 1269, 1437, 1513, 2183, 2314
Eco24I GRGCYC 3 cut(s) 2167, 2461, 3030
Eco31I GGTCTC 2 cut(s) 666, 1779
Eco32I GATATC 1 cut(s) 1617
Eco47I GGWCC 4 cut(s) 582, 824, 1387, 1750
Eco53kI GAGCTC 2 cut(s) 2165, 3028
Eco57I CTGAAG 3 cut(s) 306, 1017, 1398
Eco72I CACGTG 1 cut(s) 938
Eco81I CCTNAGG 1 cut(s) 2610
Eco91I GGTNACC 1 cut(s) 1898
EcoICRI GAGCTC 2 cut(s) 2165, 3028
EcoO65I GGTNACC 1 cut(s) 1898
EcoRII CCWGG 6 cut(s) 9, 1978, 2001, 2158, 2476, 2509
EcoRV GATATC 1 cut(s) 1617
EcoT14I CCWWGG 5 cut(s) 1269, 1437, 1513, 2183, 2314
EcoT22I ATGCAT 4 cut(s) 604, 1122, 1651, 2602
EcoT38I GRGCYC 3 cut(s) 2167, 2461, 3030
ErhI CCWWGG 5 cut(s) 1269, 1437, 1513, 2183, 2314
FalI AAGNNNNNCTT 4 cut(s) 1909, 1941, 2685, 2717
FaqI GGGAC 6 cut(s) 214, 418, 595, 1865, 2654, 2917
FauNDI CATATG 1 cut(s) 1397
FokI GGATG 8 cut(s) 152, 566, 1682, 1858, 2018, 2111, 2993, 3106
FriOI GRGCYC 3 cut(s) 2167, 2461, 3030
GlaI GCGC 2 cut(s) 37, 386
GsaI CCCAGC 1 cut(s) 2562
GsuI CTGGAG 2 cut(s) 840, 2181
HaeIII GGCC 3 cut(s) 1942, 1977, 2715
HapII CCGG 3 cut(s) 732, 2712, 2956
HgaI GACGC 1 cut(s) 2100
HhaI GCGC 2 cut(s) 38, 387
Hin6I GCGC 2 cut(s) 36, 385
HinP1I GCGC 2 cut(s) 36, 385
HincII GTYRAC 1 cut(s) 2041
HindII GTYRAC 1 cut(s) 2041
HindIII AAGCTT 2 cut(s) 1794, 2438
HpaII CCGG 3 cut(s) 732, 2712, 2956
HphI GGTGA 4 cut(s) 2106, 2153, 2791, 3119
Hpy166II GTNNAC 5 cut(s) 337, 1133, 1475, 1859, 2041
Hpy8I GTNNAC 5 cut(s) 337, 1133, 1475, 1859, 2041
HpyAV CCTTC 7 cut(s) 130, 259, 281, 406, 872, 1967, 2748
HpyCH4IV ACGT 3 cut(s) 937, 2814, 2850
HpySE526I ACGT 3 cut(s) 937, 2814, 2850
HspAI GCGC 2 cut(s) 36, 385
LguI GCTCTTC 1 cut(s) 915
LmnI GCTCC 5 cut(s) 1225, 1239, 1948, 2162, 2476
LweI GCATC 8 cut(s) 1066, 1314, 1658, 1999, 2755, 2775, 2868, 3084
MaeII ACGT 3 cut(s) 937, 2814, 2850
MfeI CAATTG 3 cut(s) 65, 1012, 2927
MflI RGATCY 7 cut(s) 373, 899, 1463, 1702, 1922, 2656, 2792
MhlI GDGCHC 4 cut(s) 2167, 2461, 2503, 3030
MlyI GAGTC 5 cut(s) 1631, 1689, 1723, 2096, 2543
MmeI TCCRAC 3 cut(s) 1632, 1926, 2962
Mph1103I ATGCAT 4 cut(s) 604, 1122, 1651, 2602
MroXI GAANNNNTTC 3 cut(s) 375, 516, 2872
MseI TTAA 9 cut(s) 276, 357, 419, 834, 1097, 1497, 1578, 2703, 2747
MslI CAYNNNNRTG 7 cut(s) 79, 1074, 1356, 1452, 2571, 2853, 2979
MspA1I CMGCKG 4 cut(s) 446, 917, 1040, 1574
MspI CCGG 3 cut(s) 732, 2712, 2956
MspR9I CCNGG 8 cut(s) 11, 1980, 2003, 2160, 2478, 2511, 2712, 2957
MunI CAATTG 3 cut(s) 65, 1012, 2927
Mva1269I GAATGC 2 cut(s) 1951, 2252
MvaI CCWGG 6 cut(s) 11, 1980, 2003, 2160, 2478, 2511
MvnI CGCG 1 cut(s) 38
NciI CCSGG 2 cut(s) 2712, 2957
NcoI CCATGG 2 cut(s) 1437, 2314
NdeI CATATG 1 cut(s) 1397
NlaIV GGNNCC 8 cut(s) 113, 329, 545, 583, 1511, 1704, 2502, 2658
NmuCI GTSAC 5 cut(s) 5, 1567, 1623, 2112, 2972
NsiI ATGCAT 4 cut(s) 604, 1122, 1651, 2602
NspI RCATGY 5 cut(s) 168, 480, 576, 1124, 1297
NspV TTCGAA 2 cut(s) 980, 2129
PaeI GCATGC 4 cut(s) 168, 576, 1124, 1297
PagI TCATGA 2 cut(s) 1351, 2524
PasI CCCWGGG 1 cut(s) 1979
PciI ACATGT 1 cut(s) 476
PciSI GCTCTTC 1 cut(s) 915
PctI GAATGC 2 cut(s) 1951, 2252
PdmI GAANNNNTTC 3 cut(s) 375, 516, 2872
PflMI CCANNNNNTGG 1 cut(s) 121
PfoI TCCNGGA 2 cut(s) 2001, 2476
PinAI ACCGGT 1 cut(s) 731
PleI GAGTC 5 cut(s) 1630, 1689, 1722, 2096, 2543
PmaCI CACGTG 1 cut(s) 938
PmlI CACGTG 1 cut(s) 938
PpsI GAGTC 5 cut(s) 1630, 1689, 1722, 2096, 2543
Ppu21I YACGTR 1 cut(s) 938
PscI ACATGT 1 cut(s) 476
Psp124BI GAGCTC 2 cut(s) 2167, 3030
Psp1406I AACGTT 1 cut(s) 2814
Psp6I CCWGG 6 cut(s) 9, 1978, 2001, 2158, 2476, 2509
PspCI CACGTG 1 cut(s) 938
PspEI GGTNACC 1 cut(s) 1898
PspFI CCCAGC 1 cut(s) 2558
PspGI CCWGG 6 cut(s) 9, 1978, 2001, 2158, 2476, 2509
PspN4I GGNNCC 8 cut(s) 113, 329, 545, 583, 1511, 1704, 2502, 2658
PspPI GGNCC 5 cut(s) 582, 824, 1387, 1750, 1976
PsrI GAACNNNNNNTAC 4 cut(s) 320, 352, 790, 822
PstI CTGCAG 3 cut(s) 384, 445, 922
PstNI CAGNNNCTG 1 cut(s) 1347
PsuI RGATCY 7 cut(s) 373, 899, 1463, 1702, 1922, 2656, 2792
PvuII CAGCTG 3 cut(s) 446, 917, 1574
RsaI GTAC 7 cut(s) 537, 720, 736, 1641, 1674, 2193, 2262
RsaNI GTAC 7 cut(s) 536, 719, 735, 1640, 1673, 2192, 2261
RseI CAYNNNNRTG 7 cut(s) 79, 1074, 1356, 1452, 2571, 2853, 2979
SacI GAGCTC 2 cut(s) 2167, 3030
SapI GCTCTTC 1 cut(s) 915
SaqAI TTAA 9 cut(s) 276, 357, 419, 834, 1097, 1497, 1578, 2703, 2747
Sau96I GGNCC 5 cut(s) 582, 824, 1387, 1750, 1976
SchI GAGTC 5 cut(s) 1631, 1689, 1723, 2096, 2543
ScrFI CCNGG 8 cut(s) 11, 1980, 2003, 2160, 2478, 2511, 2712, 2957
SduI GDGCHC 4 cut(s) 2167, 2461, 2503, 3030
SfaNI GCATC 8 cut(s) 1066, 1314, 1658, 1999, 2755, 2775, 2868, 3084
SfcI CTRYAG 3 cut(s) 380, 441, 918
SfuI TTCGAA 2 cut(s) 980, 2129
SinI GGWCC 4 cut(s) 582, 824, 1387, 1750
SmiMI CAYNNNNRTG 7 cut(s) 79, 1074, 1356, 1452, 2571, 2853, 2979
SmlI CTYRAG 2 cut(s) 1697, 3031
SmoI CTYRAG 2 cut(s) 1697, 3031
SpeI ACTAGT 1 cut(s) 1636
SphI GCATGC 4 cut(s) 168, 576, 1124, 1297
SsiI CCGC 9 cut(s) 38, 84, 154, 169, 515, 1040, 1748, 2021, 2672
SspI AATATT 2 cut(s) 395, 2626
SstI GAGCTC 2 cut(s) 2167, 3030
StyD4I CCNGG 8 cut(s) 9, 1978, 2001, 2158, 2476, 2509, 2710, 2955
StyI CCWWGG 5 cut(s) 1269, 1437, 1513, 2183, 2314
TaiI ACGT 3 cut(s) 940, 2817, 2853
TaqI TCGA 7 cut(s) 281, 500, 980, 1683, 2129, 2256, 2876
TatI WGTACW 4 cut(s) 535, 1672, 2191, 2260
TauI GCSGC 1 cut(s) 171
Tru1I TTAA 9 cut(s) 276, 357, 419, 834, 1097, 1497, 1578, 2703, 2747
Tru9I TTAA 9 cut(s) 276, 357, 419, 834, 1097, 1497, 1578, 2703, 2747
TscAI CASTG 6 cut(s) 313, 1381, 1590, 1996, 2035, 2981
TseFI GTSAC 5 cut(s) 5, 1567, 1623, 2112, 2972
Tsp45I GTSAC 5 cut(s) 5, 1567, 1623, 2112, 2972
TspGWI ACGGA 1 cut(s) 307
TspRI CASTG 6 cut(s) 313, 1381, 1590, 1996, 2035, 2981
Van91I CCANNNNNTGG 1 cut(s) 121
VpaK11BI GGWCC 4 cut(s) 582, 824, 1387, 1750
XapI RAATTY 4 cut(s) 976, 1432, 2463, 2868
XbaI TCTAGA 1 cut(s) 2948
XceI RCATGY 5 cut(s) 168, 480, 576, 1124, 1297
XcmI CCANNNNNNNNNTGG 1 cut(s) 1381
XmnI GAANNNNTTC 3 cut(s) 375, 516, 2872
Zsp2I ATGCAT 4 cut(s) 604, 1122, 1651, 2602
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.