FvH4_3g33920

RING/Ubox like zinc-binding domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0001311
Physical Location & Seq
Forward (+)
29345296 .. 29353534
8239 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g33920.t2

Sequence Viewer

Length: 3117 bp
ATGAGTGATCAGGGAGAAAAGACTTGCCCTCTCTGCGCGGAGGAGATGGATTTGACAGATCAGCAATTGAAACCATGCAAATGTGGTTATGAGATATGTGTTTGGTGTTGGCACCACATAATGGACATGGCTGAGAAGGATGACACTGAGGGGCGGTGTCCTGCATGCCGTACCCCTTATGATAAGGAAAAGATTGTAGGGGCTGCAAAGTGTGAGAGATTGGTGGCTGAAATCCATACTGAGAGGAAGAAGTCTCAGAAGACAAAAGTGAAGCCAATCACTGAAGGAAGAAAGCAGCTTAGCAGTGTGCGAGTGATTCAACGGAACCTTGTTTATATAGTTGGGTTGCCTCTTAATCTGGCAGATGAAGATCTTCTGCAGCGTAAAGAATATTTTGCTCAGTATGGGAAGGTTTTAAAGGTTTCTATGTCTCGGACAGCAGCTGGTGTCATTCAACAATTTCCAAATAATACATGTAGTGTATATATTACTTACTCAAAAGAGGAGGAAGCAGTTCGCTGTATTCAAAATGTACATGGGTTTCTATTGGATGGCAGATCTTTGAGGGCTTGCTTTGGTACCACAAAGTACTGTCACGCATGGCTTAGAAATGTGCCTTGCACCAATCCCGATTGTTTGTATCTGCACGAGGTCGGATGTCATGAGGATAGTTTCACCAAAGATGAAATAATTTCGGCATACACTAGGAGTAGAGTACAACAAATTACTGGTACTCTAAACCCTATGCAGCGCCGGTCCGGAAGTGTGTTGCCTCCACCACTAGATGATTATTGTAATAGCAGCTCTGCTTCTACTGGAGGGCCTGTTATTAAAAATGGCTCAAGTAATACTGGAATCCTCATTAAAGGTTCTCCTCCAAATGGAAGCTCTGGCAGATCTATTGCTCTTCCAGCTGCAGCCTCATGGGGTATGCGTGGTTCAAATTCTCAATCACCAGCAGCACAAATATATTCAAATGGACATGCCAAACAGAAACCTGATACAGTCAGTTGTACGGTGCCATTTTCTTCAGCTGCTGTTTCTACTGACCAGGCTTCTATAGTGCATAGTGATGCAGGAAAGAGGTCAAGATTGAATGAAGACAGTCAGACTATGCAAGCTAAAGGTAAACCGGAATCACTGAAAATTGTGAAGCAACATAGTGTGGATAGTCGAAGTATCCTGTCAGACAAACCTGCTGCACCTGATGAAGCTCCTGCTTCTCTTAATGTTAGCAGCCAGTTATCTTGTCCGCCTGCATCCAAGGACAATAATAGAGGCAGTAGTATGCAGCCAACTAGCCCTGCCACCAACCATAATCGGCAGCCTTTTAGTTCCGGTCATGAAAGTGAAAGTATGGTTTCTAATGAAGAAGCCACCCAAAGCTTATGCTCTGATATATCTCTCATGAGCATTGATAGAAATTCTGCGCTTGATCATTCTGGTGTGGTCAGACCTAATAATTCTGCTTCAGATCATTTGAATATTAAATCGCCTCAGGACCAAGGGTCACAACAACGTTCTGCAGAACAACCTAGAGAATCTCCTATAACAACCGAGAGAGCAGTAACAAGAGAACAATCTAACTGGTTATCCGAGTCACAACCATTACCTAGTATATCTTCTGAGGTGGAGGAGGATGTATTATCTTTTGATAATCAAAGACTTAAGGACCCAGAAGTGAGTCGGGCGCCGTATTTGCCTAATGCAGTCCATGTTTCAAGTCACTCTAGGTCTCCGTTGCTACCTAGTGAGGGTTATGGTTCAGTTTATTCAAGTGCTGATCGCCTTTTTGTAGATAATAAAATAAGGGACAGTTCACTTCTATCTTCGACCAACGTGCCAGTACAATCTAATGGTTACCATGAAAATTTTGTAAGCAGCTCTTCTGGTCCAGAGAGGCCCTTGGACAATTCATTTCTTCATCGAAATGAAGGCCTGGGGCAGCAAGGTCGAAGATTCTTGGGTGAAGCAGCTAATCCTGGTTTCAGTAATGCTGTGGACAAGGGAGAGAGCAGCATAATCTCAAATATATTATCAATGGACTTCGACACTTGGGATGACCCAATAATATTGCCTCAGAATTTCTCTAAGTTTTTGGGTGAATCTGATAGACAGGCTGGAGCTCAAAAACTGGCCTCTTCTTGGAAAGTACCAAATAATAATCAGTCAAGATTCTCTTTTGCAAGACAGGAGGATTCTAGACATCAGCCATTTGATCTACAGTCATCTCAGAGTGTTATTGGGCGGTTATCACAGAACCAAGCACAGAACCAAGGATTCCATCATGGCTATACTGAAAATCGAGATTTATCATTGGATAATTTTGGAATTGGAAATGGTTTTCCTTCAAATACAAATGAAGATTCTGAAAATCATGCCAACAATCTTTTAGCCTTCTCTTCGAACAAGCTTTCTGCAGTTTCAAGGGCTCAAATCTCCGCTCCTCCGGGATTCTCTGTGCCAAGCAGGGCCCCACCACCGGGCTTTACTTCTCATGAGAGATTGGAGCATGATTTTGACTCACTATCTGGGAATATTTTGCACGATAACTCTGTGTTGAGAAATTCCTATCAACCCCAGCCCACGGGGAATATTGGTAGCTCTGGGGATATTGAGTTTATGGATCCTGCTATATTGGCAGTTGGTAAAGGGAGACTGCAAGGTGGGCTTAACAACCCTGGTGTAGAAATGAGATCCAACTATCCTTCACAGTTAAGTGCCTTTGAAAATGATGCAAGGCTTCAGCTATTGATGCAAAGATCCTTCCCCCAACAACAAAACCTCAGGTATCCTGATTTTGGGGATGGCTATTCTCATGTCAATGATTCCTATGGATTGTCATCGAGGCTTTTGGATCAATCTCAAGCTAGCAATATATCGCCCTTTGCTCAACTGTCTCTTCAACAATCCAGAAATAACCGGTCCATGCCAAATGGCCATTGGGATGGATGGAATGAAGCTCAGGGTGGTAACAGTATTGGTATGGCAGAGCTTCTGAGAAATGAGAGAGTAAATGAGAGACTAGGATTCAACAAGTTCTATTCTGGTTATGAAGAATTGAAGTTTCGGATGCCCAGTTCTGGCGACCTATATAACAGAACCTTTGGAATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000075 GO:0000077 GO:0000278 GO:0000288 GO:0000289 GO:0000956 GO:0002682 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006401 GO:0006402 GO:0006464 GO:0006508 GO:0006511 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006977 GO:0007049 GO:0007093 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010564 GO:0010605 GO:0010629 GO:0010948 GO:0016070 GO:0016071 GO:0016567 GO:0016740 GO:0019222 GO:0019439 GO:0019538 GO:0019787 GO:0019941 GO:0022402 GO:0023052 GO:0030163 GO:0030330 GO:0031570 GO:0031571 GO:0032446 GO:0033554 GO:0034641 GO:0034655 GO:0035556 GO:0036211 GO:0042770 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0044773 GO:0044774 GO:0044783 GO:0044819 GO:0045595 GO:0045637 GO:0045652 GO:0045786 GO:0045787 GO:0045930 GO:0046483 GO:0046700 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051603 GO:0051716 GO:0051726 GO:0051865 GO:0060255 GO:0065007 GO:0070647 GO:0071156 GO:0071158 GO:0071704 GO:0072331 GO:0072395 GO:0072401 GO:0072413 GO:0072422 GO:0072431 GO:0090068 GO:0090304 GO:0140096 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575 GO:1901987 GO:1901988 GO:1901990 GO:1901991 GO:1902400 GO:1902402 GO:1902403 GO:1902806 GO:1902807 GO:1903047 GO:1903706 GO:2000026 GO:2000045 GO:2000134
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
RRM_1 zf-RING_4

Protein Analysis

1039

Amino Acids

114.13

Weight (kDa)

6.17

Isoelectric Point (pI)

59.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_4 PF14570 9 - 61 1.5e-19 RING/Ubox like zinc-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1204
Acc65I GGTACC 1 cut(s) 578
AccB1I GGYRCC 4 cut(s) 111, 578, 1018, 1690
AccB7I CCANNNNNTGG 1 cut(s) 121
AccBSI CCGCTC 1 cut(s) 2444
AccII CGCG 1 cut(s) 38
AccIII TCCGGA 1 cut(s) 758
AciI CCGC 5 cut(s) 38, 154, 1253, 2248, 2442
AclI AACGTT 1 cut(s) 1519
AclWI GGATC 5 cut(s) 2621, 2634, 2691, 2757, 2865
AcoI YGGCCR 1 cut(s) 2938
AcsI RAATTY 5 cut(s) 943, 1423, 1870, 2083, 2566
AcuI CTGAAG 4 cut(s) 303, 1014, 1455, 2729
AcyI GRCGYC 1 cut(s) 1691
AfaI GTAC 9 cut(s) 172, 534, 580, 590, 717, 733, 1015, 1848, 2154
AfiI CCNNNNNNNGG 9 cut(s) 121, 881, 1754, 2145, 2482, 2483, 2587, 2801, 3083
AflII CTTAAG 1 cut(s) 1667
AflIII ACRYGT 1 cut(s) 473
AgeI ACCGGT 1 cut(s) 2922
AhdI GACNNNNNGTC 1 cut(s) 1507
AjnI CCWGG 4 cut(s) 1050, 1938, 1981, 2680
AloI GAACNNNNNNTCC 2 cut(s) 3064, 3096
Alw21I GWGCWC 1 cut(s) 2128
Alw26I GTCTC 6 cut(s) 258, 435, 1740, 2650, 2904, 3016
AlwI GGATC 5 cut(s) 2621, 2634, 2691, 2757, 2865
AlwNI CAGNNNCTG 2 cut(s) 443, 1037
Aor13HI TCCGGA 1 cut(s) 758
AoxI GGCC 6 cut(s) 821, 1901, 1936, 2136, 2472, 2938
ApaI GGGCCC 1 cut(s) 2476
ApoI RAATTY 5 cut(s) 943, 1423, 1870, 2083, 2566
AsiGI ACCGGT 1 cut(s) 2922
Asp700I GAANNNNTTC 2 cut(s) 372, 513
Asp718I GGTACC 1 cut(s) 578
AspLEI GCGC 4 cut(s) 38, 753, 1432, 1693
AspS9I GGNCC 9 cut(s) 756, 821, 1501, 1672, 1892, 1902, 2472, 2473, 2925
AsuC2I CCSGG 2 cut(s) 2451, 2484
AsuHPI GGTGA 4 cut(s) 667, 945, 1979, 2114
AsuII TTCGAA 1 cut(s) 2405
AsuNHI GCTAGC 1 cut(s) 2870
AvaII GGWCC 5 cut(s) 756, 1501, 1672, 1892, 2925
AxyI CCTNAGG 2 cut(s) 1497, 2786
BaeGI GKGCMC 1 cut(s) 2476
BalI TGGCCA 1 cut(s) 2940
BamHI GGATCC 1 cut(s) 2626
BanI GGYRCC 4 cut(s) 111, 578, 1018, 1690
BanII GRGCYC 3 cut(s) 2128, 2434, 2476
BauI CACGAG 1 cut(s) 647
BbsI GAAGAC 2 cut(s) 266, 1107
Bbv12I GWGCWC 1 cut(s) 2128
BccI CCATC 6 cut(s) 40, 545, 2292, 2801, 2942, 2946
BceAI ACGGC 2 cut(s) 153, 1678
BcgI CGANNNNNNTGC 4 cut(s) 1822, 1856, 1934, 1968
BciT130I CCWGG 4 cut(s) 1052, 1940, 1983, 2682
BciVI GTATCC 2 cut(s) 1190, 2802
BclI TGATCA 2 cut(s) 7, 1435
BcnI CCSGG 2 cut(s) 2451, 2484
BcoDI GTCTC 6 cut(s) 258, 435, 1740, 2650, 2904, 3016
BfmI CTRYAG 6 cut(s) 377, 915, 1059, 1524, 2222, 2418
BfoI RGCGCY 2 cut(s) 754, 1694
BfrI CTTAAG 1 cut(s) 1667
BfuAI ACCTGC 1 cut(s) 1204
BfuI GTATCC 2 cut(s) 1190, 2802
BglII AGATCT 3 cut(s) 370, 557, 896
BlpI GCTNAGC 1 cut(s) 299
BmcAI AGTACT 1 cut(s) 590
Bme1390I CCNGG 6 cut(s) 1052, 1940, 1983, 2451, 2484, 2682
Bme18I GGWCC 5 cut(s) 756, 1501, 1672, 1892, 2925
BmeRI GACNNNNNGTC 1 cut(s) 1507
BmgT120I GGNCC 9 cut(s) 756, 821, 1501, 1672, 1892, 1902, 2472, 2473, 2925
BmiI GGNNCC 9 cut(s) 113, 326, 580, 1020, 1674, 1692, 2474, 2475, 2628
BmrFI CCNGG 6 cut(s) 1052, 1940, 1983, 2451, 2484, 2682
BmrI ACTGGG 1 cut(s) 3072
BmsI GCATC 5 cut(s) 1063, 1268, 2725, 2745, 3063
BmtI GCTAGC 1 cut(s) 2874
BmuI ACTGGG 1 cut(s) 3072
BpiI GAAGAC 2 cut(s) 266, 1107
BpmI CTGGAG 2 cut(s) 837, 2142
Bpu10I CCTNAGC 1 cut(s) 2964
Bpu1102I GCTNAGC 1 cut(s) 299
Bpu14I TTCGAA 1 cut(s) 2405
BpuEI CTTGAG 2 cut(s) 826, 2850
BpuMI CCSGG 2 cut(s) 2451, 2484
BsaBI GATNNNNATC 2 cut(s) 369, 2842
BsaHI GRCGYC 1 cut(s) 1691
BsaI GGTCTC 1 cut(s) 1740
BsaJI CCNNGG 7 cut(s) 1263, 1504, 1905, 1939, 2275, 2586, 2680
BsaWI WCCGGW 4 cut(s) 758, 1132, 1337, 2922
BsaXI ACNNNNNCTCC 2 cut(s) 810, 840
Bsc4I CCNNNNNNNGG 9 cut(s) 121, 881, 1754, 2145, 2482, 2483, 2587, 2801, 3083
Bse118I RCCGGY 2 cut(s) 753, 2922
Bse1I ACTGG 8 cut(s) 733, 820, 856, 1240, 1592, 1844, 2139, 3078
Bse21I CCTNAGG 2 cut(s) 1497, 2786
Bse8I GATNNNNATC 2 cut(s) 369, 2842
BseAI TCCGGA 1 cut(s) 758
BseBI CCWGG 4 cut(s) 1052, 1940, 1983, 2682
BseDI CCNNGG 7 cut(s) 1263, 1504, 1905, 1939, 2275, 2586, 2680
BseJI GATNNNNATC 2 cut(s) 369, 2842
BseLI CCNNNNNNNGG 9 cut(s) 121, 881, 1754, 2145, 2482, 2483, 2587, 2801, 3083
BseNI ACTGG 8 cut(s) 733, 820, 856, 1240, 1592, 1844, 2139, 3078
BseRI GAGGAG 5 cut(s) 56, 518, 864, 1649, 2436
BseSI GKGCMC 1 cut(s) 2476
BseYI CCCAGC 1 cut(s) 2580
BsgI GTGCAG 2 cut(s) 629, 1185
Bsh1236I CGCG 1 cut(s) 38
BshFI GGCC 6 cut(s) 823, 1903, 1938, 2138, 2474, 2940
BshNI GGYRCC 4 cut(s) 111, 578, 1018, 1690
BshTI ACCGGT 1 cut(s) 2922
BsiHKAI GWGCWC 1 cut(s) 2128
BsiSI CCGG 7 cut(s) 754, 759, 1133, 1338, 2450, 2483, 2923
BslFI GGGAC 1 cut(s) 1826
BslI CCNNNNNNNGG 9 cut(s) 121, 881, 1754, 2145, 2482, 2483, 2587, 2801, 3083
BsmAI GTCTC 6 cut(s) 258, 435, 1740, 2650, 2904, 3016
BsmFI GGGAC 1 cut(s) 1826
BsnI GGCC 6 cut(s) 823, 1903, 1938, 2138, 2474, 2940
Bso31I GGTCTC 1 cut(s) 1740
Bsp119I TTCGAA 1 cut(s) 2405
Bsp120I GGGCCC 1 cut(s) 2472
Bsp1286I GDGCHC 3 cut(s) 2128, 2434, 2476
Bsp13I TCCGGA 1 cut(s) 758
Bsp1407I TGTACA 1 cut(s) 532
Bsp1720I GCTNAGC 1 cut(s) 299
BspACI CCGC 5 cut(s) 38, 154, 1253, 2248, 2442
BspANI GGCC 6 cut(s) 823, 1903, 1938, 2138, 2474, 2940
BspEI TCCGGA 1 cut(s) 758
BspFNI CGCG 1 cut(s) 38
BspHI TCATGA 4 cut(s) 661, 1342, 1407, 2497
BspLI GGNNCC 9 cut(s) 113, 326, 580, 1020, 1674, 1692, 2474, 2475, 2628
BspMAI CTGCAG 4 cut(s) 381, 919, 1528, 2422
BspMI ACCTGC 1 cut(s) 1204
BspOI GCTAGC 1 cut(s) 2874
BspPI GGATC 5 cut(s) 2621, 2634, 2691, 2757, 2865
BspQI GCTCTTC 2 cut(s) 912, 1891
BspT104I TTCGAA 1 cut(s) 2405
BspT107I GGYRCC 4 cut(s) 111, 578, 1018, 1690
BspTI CTTAAG 1 cut(s) 1667
BspTNI GGTCTC 1 cut(s) 1740
BsrBI CCGCTC 1 cut(s) 2444
BsrFI RCCGGY 2 cut(s) 753, 2922
BsrGI TGTACA 1 cut(s) 532
BsrI ACTGG 8 cut(s) 733, 820, 856, 1240, 1592, 1844, 2139, 3078
BssAI RCCGGY 2 cut(s) 753, 2922
BssECI CCNNGG 7 cut(s) 1263, 1504, 1905, 1939, 2275, 2586, 2680
BssNI GRCGYC 1 cut(s) 1691
BssSI CACGAG 1 cut(s) 647
BssT1I CCWWGG 4 cut(s) 1263, 1504, 1905, 2275
Bst2BI CACGAG 1 cut(s) 647
Bst2UI CCWGG 4 cut(s) 1052, 1940, 1983, 2682
Bst4CI ACNGT 9 cut(s) 593, 1006, 1018, 1106, 1817, 2226, 2715, 2898, 2978
Bst6I CTCTTC 5 cut(s) 912, 1891, 2146, 2407, 2907
BstACI GRCGYC 1 cut(s) 1691
BstAFI CTTAAG 1 cut(s) 1667
BstAUI TGTACA 1 cut(s) 532
BstBI TTCGAA 1 cut(s) 2405
BstC8I GCNNGC 5 cut(s) 166, 571, 1119, 1257, 2872
BstDSI CCRYGG 1 cut(s) 2586
BstEII GGTNACC 1 cut(s) 1859
BstFNI CGCG 1 cut(s) 38
BstH2I RGCGCY 2 cut(s) 754, 1694
BstHHI GCGC 4 cut(s) 38, 753, 1432, 1693
BstMAI GTCTC 6 cut(s) 258, 435, 1740, 2650, 2904, 3016
BstMWI GCNNNNNNNGC 6 cut(s) 33, 911, 1699, 2639, 2668, 2755
BstNI CCWGG 4 cut(s) 1052, 1940, 1983, 2682
BstNSI RCATGY 3 cut(s) 168, 477, 986
BstPI GGTNACC 1 cut(s) 1859
BstSCI CCNGG 6 cut(s) 1050, 1938, 1981, 2449, 2482, 2680
BstSFI CTRYAG 6 cut(s) 377, 915, 1059, 1524, 2222, 2418
BstSLI GKGCMC 1 cut(s) 2476
BstUI CGCG 1 cut(s) 38
BstV2I GAAGAC 2 cut(s) 266, 1107
BstX2I RGATCY 6 cut(s) 370, 557, 896, 2626, 2696, 2762
BstXI CCANNNNNNTGG 1 cut(s) 2948
BstYI RGATCY 6 cut(s) 370, 557, 896, 2626, 2696, 2762
Bsu36I CCTNAGG 2 cut(s) 1497, 2786
BsuI GTATCC 2 cut(s) 1190, 2802
BsuRI GGCC 6 cut(s) 823, 1903, 1938, 2138, 2474, 2940
BtgI CCRYGG 1 cut(s) 2586
BtsI GCAGTG 1 cut(s) 310
BtsIMutI CAGTG 4 cut(s) 144, 279, 310, 1139
BveI ACCTGC 1 cut(s) 1204
Cac8I GCNNGC 5 cut(s) 166, 571, 1119, 1257, 2872
CaiI CAGNNNCTG 2 cut(s) 443, 1037
CciI TCATGA 4 cut(s) 661, 1342, 1407, 2497
CfoI GCGC 4 cut(s) 38, 753, 1432, 1693
Cfr10I RCCGGY 2 cut(s) 753, 2922
Cfr13I GGNCC 9 cut(s) 756, 821, 1501, 1672, 1892, 1902, 2472, 2473, 2925
CpoI CGGWCCG 1 cut(s) 756
Csp6I GTAC 9 cut(s) 171, 533, 579, 589, 716, 732, 1014, 1847, 2153
CspAI ACCGGT 1 cut(s) 2922
CspI CGGWCCG 1 cut(s) 756
CviQI GTAC 9 cut(s) 171, 533, 579, 589, 716, 732, 1014, 1847, 2153
DinI GGCGCC 1 cut(s) 1692
DraI TTTAAA 1 cut(s) 417
DriI GACNNNNNGTC 1 cut(s) 1507
EaeI YGGCCR 1 cut(s) 2938
Eam1104I CTCTTC 5 cut(s) 912, 1891, 2146, 2407, 2907
Eam1105I GACNNNNNGTC 1 cut(s) 1507
EarI CTCTTC 5 cut(s) 912, 1891, 2146, 2407, 2907
EciI GGCGGA 1 cut(s) 1242
Ecl136II GAGCTC 1 cut(s) 2126
Eco130I CCWWGG 4 cut(s) 1263, 1504, 1905, 2275
Eco147I AGGCCT 1 cut(s) 1938
Eco24I GRGCYC 3 cut(s) 2128, 2434, 2476
Eco31I GGTCTC 1 cut(s) 1740
Eco47I GGWCC 5 cut(s) 756, 1501, 1672, 1892, 2925
Eco53kI GAGCTC 1 cut(s) 2126
Eco57I CTGAAG 4 cut(s) 303, 1014, 1455, 2729
Eco81I CCTNAGG 2 cut(s) 1497, 2786
Eco91I GGTNACC 1 cut(s) 1859
EcoICRI GAGCTC 1 cut(s) 2126
EcoO109I RGGNCCY 5 cut(s) 821, 1672, 1902, 2472, 2473
EcoO65I GGTNACC 1 cut(s) 1859
EcoRII CCWGG 4 cut(s) 1050, 1938, 1981, 2680
EcoT14I CCWWGG 4 cut(s) 1263, 1504, 1905, 2275
EcoT38I GRGCYC 3 cut(s) 2128, 2434, 2476
EgeI GGCGCC 1 cut(s) 1692
EheI GGCGCC 1 cut(s) 1692
ErhI CCWWGG 4 cut(s) 1263, 1504, 1905, 2275
FalI AAGNNNNNCTT 6 cut(s) 1870, 1902, 2164, 2196, 2655, 2687
FaqI GGGAC 1 cut(s) 1826
FbaI TGATCA 2 cut(s) 7, 1435
FriOI GRGCYC 3 cut(s) 2128, 2434, 2476
GlaI GCGC 4 cut(s) 37, 752, 1431, 1692
GsaI CCCAGC 1 cut(s) 2584
GsuI CTGGAG 2 cut(s) 837, 2142
HaeII RGCGCY 2 cut(s) 754, 1694
HaeIII GGCC 6 cut(s) 823, 1903, 1938, 2138, 2474, 2940
HapII CCGG 7 cut(s) 754, 759, 1133, 1338, 2450, 2483, 2923
HhaI GCGC 4 cut(s) 38, 753, 1432, 1693
Hin1I GRCGYC 1 cut(s) 1691
Hin6I GCGC 4 cut(s) 36, 751, 1430, 1691
HinP1I GCGC 4 cut(s) 36, 751, 1430, 1691
HindIII AAGCTT 2 cut(s) 1384, 2411
HpaII CCGG 7 cut(s) 754, 759, 1133, 1338, 2450, 2483, 2923
HphI GGTGA 4 cut(s) 667, 945, 1979, 2114
Hpy166II GTNNAC 3 cut(s) 1130, 1820, 2002
Hpy8I GTNNAC 3 cut(s) 1130, 1820, 2002
HpyAV CCTTC 8 cut(s) 130, 278, 403, 1928, 2358, 2407, 2718, 2776
HpyCH4III ACNGT 9 cut(s) 593, 1006, 1018, 1106, 1817, 2226, 2715, 2898, 2978
HpyCH4IV ACGT 2 cut(s) 1519, 1839
HpyF10VI GCNNNNNNNGC 6 cut(s) 33, 911, 1699, 2639, 2668, 2755
HpySE526I ACGT 2 cut(s) 1519, 1839
Hsp92I GRCGYC 1 cut(s) 1691
HspAI GCGC 4 cut(s) 36, 751, 1430, 1691
KasI GGCGCC 1 cut(s) 1690
Kpn2I TCCGGA 1 cut(s) 758
KpnI GGTACC 1 cut(s) 582
Ksp22I TGATCA 2 cut(s) 7, 1435
LguI GCTCTTC 2 cut(s) 912, 1891
LmnI GCTCC 4 cut(s) 1219, 2123, 2449, 2509
LweI GCATC 5 cut(s) 1063, 1268, 2725, 2745, 3063
MaeII ACGT 2 cut(s) 1519, 1839
MaeIII GTNAC 7 cut(s) 593, 1509, 1567, 1599, 1724, 1859, 2972
MbiI CCGCTC 1 cut(s) 2444
MfeI CAATTG 1 cut(s) 65
MflI RGATCY 6 cut(s) 370, 557, 896, 2626, 2696, 2762
MhlI GDGCHC 3 cut(s) 2128, 2434, 2476
MlsI TGGCCA 1 cut(s) 2940
MluNI TGGCCA 1 cut(s) 2940
Mly113I GGCGCC 1 cut(s) 1691
MlyI GAGTC 3 cut(s) 1607, 1693, 2516
MmeI TCCRAC 2 cut(s) 634, 2724
Mox20I TGGCCA 1 cut(s) 2940
MroI TCCGGA 1 cut(s) 758
MroXI GAANNNNTTC 2 cut(s) 372, 513
MscI TGGCCA 1 cut(s) 2940
MseI TTAA 9 cut(s) 354, 416, 831, 864, 1227, 1488, 1668, 2673, 2717
MslI CAYNNNNRTG 7 cut(s) 79, 1071, 1347, 1443, 1929, 2823, 2946
Msp20I TGGCCA 1 cut(s) 2940
MspA1I CMGCKG 3 cut(s) 443, 914, 1034
MspCI CTTAAG 1 cut(s) 1667
MspI CCGG 7 cut(s) 754, 759, 1133, 1338, 2450, 2483, 2923
MspR9I CCNGG 6 cut(s) 1052, 1940, 1983, 2451, 2484, 2682
MunI CAATTG 1 cut(s) 65
MvaI CCWGG 4 cut(s) 1052, 1940, 1983, 2682
MvnI CGCG 1 cut(s) 38
MwoI GCNNNNNNNGC 6 cut(s) 33, 911, 1699, 2639, 2668, 2755
NarI GGCGCC 1 cut(s) 1691
NciI CCSGG 2 cut(s) 2451, 2484
NheI GCTAGC 1 cut(s) 2870
NlaIV GGNNCC 9 cut(s) 113, 326, 580, 1020, 1674, 1692, 2474, 2475, 2628
NmuCI GTSAC 4 cut(s) 593, 1509, 1599, 1724
NspI RCATGY 3 cut(s) 168, 477, 986
NspV TTCGAA 1 cut(s) 2405
PaeI GCATGC 1 cut(s) 168
PagI TCATGA 4 cut(s) 661, 1342, 1407, 2497
PceI AGGCCT 1 cut(s) 1938
PciI ACATGT 1 cut(s) 473
PciSI GCTCTTC 2 cut(s) 912, 1891
PdmI GAANNNNTTC 2 cut(s) 372, 513
PflMI CCANNNNNTGG 1 cut(s) 121
PfoI TCCNGGA 1 cut(s) 2449
PinAI ACCGGT 1 cut(s) 2922
PleI GAGTC 3 cut(s) 1606, 1692, 2516
PluTI GGCGCC 1 cut(s) 1694
PpsI GAGTC 3 cut(s) 1606, 1692, 2516
PpuMI RGGWCCY 1 cut(s) 1672
PscI ACATGT 1 cut(s) 473
Psp124BI GAGCTC 1 cut(s) 2128
Psp1406I AACGTT 1 cut(s) 1519
Psp5II RGGWCCY 1 cut(s) 1672
Psp6I CCWGG 4 cut(s) 1050, 1938, 1981, 2680
PspEI GGTNACC 1 cut(s) 1859
PspFI CCCAGC 1 cut(s) 2580
PspGI CCWGG 4 cut(s) 1050, 1938, 1981, 2680
PspN4I GGNNCC 9 cut(s) 113, 326, 580, 1020, 1674, 1692, 2474, 2475, 2628
PspOMI GGGCCC 1 cut(s) 2472
PspPI GGNCC 9 cut(s) 756, 821, 1501, 1672, 1892, 1902, 2472, 2473, 2925
PspPPI RGGWCCY 1 cut(s) 1672
PsrI GAACNNNNNNTAC 2 cut(s) 922, 954
PstI CTGCAG 4 cut(s) 381, 919, 1528, 2422
PstNI CAGNNNCTG 2 cut(s) 443, 1037
PsuI RGATCY 6 cut(s) 370, 557, 896, 2626, 2696, 2762
PvuII CAGCTG 3 cut(s) 443, 914, 1034
RsaI GTAC 9 cut(s) 172, 534, 580, 590, 717, 733, 1015, 1848, 2154
RsaNI GTAC 9 cut(s) 171, 533, 579, 589, 716, 732, 1014, 1847, 2153
RseI CAYNNNNRTG 7 cut(s) 79, 1071, 1347, 1443, 1929, 2823, 2946
Rsr2I CGGWCCG 1 cut(s) 756
RsrII CGGWCCG 1 cut(s) 756
SacI GAGCTC 1 cut(s) 2128
SapI GCTCTTC 2 cut(s) 912, 1891
SaqAI TTAA 9 cut(s) 354, 416, 831, 864, 1227, 1488, 1668, 2673, 2717
Sau96I GGNCC 9 cut(s) 756, 821, 1501, 1672, 1892, 1902, 2472, 2473, 2925
ScaI AGTACT 1 cut(s) 590
SchI GAGTC 3 cut(s) 1607, 1693, 2516
ScrFI CCNGG 6 cut(s) 1052, 1940, 1983, 2451, 2484, 2682
SduI GDGCHC 3 cut(s) 2128, 2434, 2476
SfaNI GCATC 5 cut(s) 1063, 1268, 2725, 2745, 3063
SfcI CTRYAG 6 cut(s) 377, 915, 1059, 1524, 2222, 2418
SfoI GGCGCC 1 cut(s) 1692
SfuI TTCGAA 1 cut(s) 2405
SinI GGWCC 5 cut(s) 756, 1501, 1672, 1892, 2925
SmiMI CAYNNNNRTG 7 cut(s) 79, 1071, 1347, 1443, 1929, 2823, 2946
SmlI CTYRAG 3 cut(s) 841, 1667, 2865
SmoI CTYRAG 3 cut(s) 841, 1667, 2865
SphI GCATGC 1 cut(s) 168
SseBI AGGCCT 1 cut(s) 1938
SsiI CCGC 5 cut(s) 38, 154, 1253, 2248, 2442
SspDI GGCGCC 1 cut(s) 1690
SspI AATATT 5 cut(s) 392, 1486, 2073, 2539, 2596
SstI GAGCTC 1 cut(s) 2128
StuI AGGCCT 1 cut(s) 1938
StyD4I CCNGG 6 cut(s) 1050, 1938, 1981, 2449, 2482, 2680
StyI CCWWGG 4 cut(s) 1263, 1504, 1905, 2275
TaaI ACNGT 9 cut(s) 593, 1006, 1018, 1106, 1817, 2226, 2715, 2898, 2978
TaiI ACGT 2 cut(s) 1522, 1842
TaqI TCGA 8 cut(s) 1174, 1832, 1927, 1954, 2049, 2305, 2405, 2846
TatI WGTACW 4 cut(s) 532, 588, 715, 1846
Tru1I TTAA 9 cut(s) 354, 416, 831, 864, 1227, 1488, 1668, 2673, 2717
Tru9I TTAA 9 cut(s) 354, 416, 831, 864, 1227, 1488, 1668, 2673, 2717
TscAI CASTG 4 cut(s) 151, 286, 310, 1146
TseFI GTSAC 4 cut(s) 593, 1509, 1599, 1724
Tsp45I GTSAC 4 cut(s) 593, 1509, 1599, 1724
TspGWI ACGGA 2 cut(s) 337, 1728
TspRI CASTG 4 cut(s) 151, 286, 310, 1146
Van91I CCANNNNNTGG 1 cut(s) 121
Vha464I CTTAAG 1 cut(s) 1667
VpaK11BI GGWCC 5 cut(s) 756, 1501, 1672, 1892, 2925
XapI RAATTY 5 cut(s) 943, 1423, 1870, 2083, 2566
XbaI TCTAGA 1 cut(s) 2201
XceI RCATGY 3 cut(s) 168, 477, 986
XcmI CCANNNNNNNNNTGG 1 cut(s) 2940
XmnI GAANNNNTTC 2 cut(s) 372, 513
ZrmI AGTACT 1 cut(s) 590
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.