Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr7g0230641 |
| rosa_laevigata | RLG00000001021 |
| rosa_multiflora | Rmu_co8057968.1_g000001 Rmu_sc0002222.1_g000013 Rmu_sc0004952.1_g000009 Rmu_sc0009140.1_g000012 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 156 |
| AciI | CCGC | 2 cut(s) | 92, 218 |
| AfaI | GTAC | 1 cut(s) | 175 |
| AflIII | ACRYGT | 1 cut(s) | 165 |
| AluBI | AGCT | 2 cut(s) | 49, 242 |
| AluI | AGCT | 2 cut(s) | 49, 242 |
| Alw21I | GWGCWC | 1 cut(s) | 51 |
| AoxI | GGCC | 1 cut(s) | 114 |
| AspLEI | GCGC | 1 cut(s) | 128 |
| AsuHPI | GGTGA | 1 cut(s) | 207 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 165, 198 |
| BanII | GRGCYC | 1 cut(s) | 51 |
| BbsI | GAAGAC | 1 cut(s) | 88 |
| Bbv12I | GWGCWC | 1 cut(s) | 51 |
| BccI | CCATC | 1 cut(s) | 220 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 63, 97 |
| BfmI | CTRYAG | 1 cut(s) | 157 |
| BfoI | RGCGCY | 1 cut(s) | 129 |
| BmsI | GCATC | 2 cut(s) | 10, 133 |
| BpiI | GAAGAC | 1 cut(s) | 88 |
| BsaJI | CCNNGG | 1 cut(s) | 138 |
| Bse118I | RCCGGY | 1 cut(s) | 23 |
| Bse3DI | GCAATG | 1 cut(s) | 81 |
| BseDI | CCNNGG | 1 cut(s) | 138 |
| BseGI | GGATG | 1 cut(s) | 148 |
| BseMI | GCAATG | 1 cut(s) | 81 |
| BseYI | CCCAGC | 1 cut(s) | 238 |
| BshFI | GGCC | 1 cut(s) | 116 |
| BsiHKAI | GWGCWC | 1 cut(s) | 51 |
| BsiSI | CCGG | 1 cut(s) | 24 |
| BslFI | GGGAC | 1 cut(s) | 220 |
| BsmFI | GGGAC | 1 cut(s) | 220 |
| BsnI | GGCC | 1 cut(s) | 116 |
| Bsp1286I | GDGCHC | 1 cut(s) | 51 |
| BspACI | CCGC | 2 cut(s) | 92, 218 |
| BspANI | GGCC | 1 cut(s) | 116 |
| BsrDI | GCAATG | 1 cut(s) | 81 |
| BsrFI | RCCGGY | 1 cut(s) | 23 |
| BssAI | RCCGGY | 1 cut(s) | 23 |
| BssECI | CCNNGG | 1 cut(s) | 138 |
| BssT1I | CCWWGG | 1 cut(s) | 138 |
| BstC8I | GCNNGC | 2 cut(s) | 25, 130 |
| BstF5I | GGATG | 1 cut(s) | 148 |
| BstH2I | RGCGCY | 1 cut(s) | 129 |
| BstHHI | GCGC | 1 cut(s) | 128 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 55, 206 |
| BstNSI | RCATGY | 1 cut(s) | 169 |
| BstSFI | CTRYAG | 1 cut(s) | 157 |
| BstV2I | GAAGAC | 1 cut(s) | 88 |
| BsuRI | GGCC | 1 cut(s) | 116 |
| BtsCI | GGATG | 1 cut(s) | 148 |
| BtsI | GCAGTG | 1 cut(s) | 204 |
| BtsIMutI | CAGTG | 1 cut(s) | 204 |
| Cac8I | GCNNGC | 2 cut(s) | 25, 130 |
| CfoI | GCGC | 1 cut(s) | 128 |
| Cfr10I | RCCGGY | 1 cut(s) | 23 |
| Csp6I | GTAC | 1 cut(s) | 174 |
| CviAII | CATG | 1 cut(s) | 166 |
| CviJI | RGCY | 4 cut(s) | 27, 49, 116, 242 |
| CviKI_1 | RGCY | 4 cut(s) | 27, 49, 116, 242 |
| CviQI | GTAC | 1 cut(s) | 174 |
| Ecl136II | GAGCTC | 1 cut(s) | 49 |
| Eco130I | CCWWGG | 1 cut(s) | 138 |
| Eco24I | GRGCYC | 1 cut(s) | 51 |
| Eco53kI | GAGCTC | 1 cut(s) | 49 |
| EcoICRI | GAGCTC | 1 cut(s) | 49 |
| EcoT14I | CCWWGG | 1 cut(s) | 138 |
| EcoT38I | GRGCYC | 1 cut(s) | 51 |
| ErhI | CCWWGG | 1 cut(s) | 138 |
| FaeI | CATG | 1 cut(s) | 169 |
| FaiI | YATR | 4 cut(s) | 56, 113, 167, 248 |
| FaqI | GGGAC | 1 cut(s) | 220 |
| FatI | CATG | 1 cut(s) | 165 |
| FblI | GTMKAC | 1 cut(s) | 156 |
| FokI | GGATG | 1 cut(s) | 155 |
| FriOI | GRGCYC | 1 cut(s) | 51 |
| GlaI | GCGC | 1 cut(s) | 127 |
| GsaI | CCCAGC | 1 cut(s) | 242 |
| HaeII | RGCGCY | 1 cut(s) | 129 |
| HaeIII | GGCC | 1 cut(s) | 116 |
| HapII | CCGG | 1 cut(s) | 24 |
| HhaI | GCGC | 1 cut(s) | 128 |
| Hin1II | CATG | 1 cut(s) | 169 |
| Hin6I | GCGC | 1 cut(s) | 126 |
| HinP1I | GCGC | 1 cut(s) | 126 |
| HpaII | CCGG | 1 cut(s) | 24 |
| HphI | GGTGA | 1 cut(s) | 207 |
| Hpy166II | GTNNAC | 1 cut(s) | 157 |
| Hpy188I | TCNGA | 1 cut(s) | 85 |
| Hpy8I | GTNNAC | 1 cut(s) | 157 |
| HpyCH4V | TGCA | 1 cut(s) | 209 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 55, 206 |
| Hsp92II | CATG | 1 cut(s) | 169 |
| HspAI | GCGC | 1 cut(s) | 126 |
| KroI | GCCGGC | 1 cut(s) | 23 |
| KroNI | GCCGGC | 1 cut(s) | 25 |
| LmnI | GCTCC | 2 cut(s) | 54, 247 |
| LpnPI | CCDG | 6 cut(s) | 37, 56, 108, 114, 145, 252 |
| LweI | GCATC | 2 cut(s) | 10, 133 |
| MaeIII | GTNAC | 1 cut(s) | 181 |
| MboII | GAAGA | 1 cut(s) | 88 |
| MhlI | GDGCHC | 1 cut(s) | 51 |
| MluCI | AATT | 1 cut(s) | 257 |
| MmeI | TCCRAC | 1 cut(s) | 63 |
| MnlI | CCTC | 1 cut(s) | 69 |
| MroNI | GCCGGC | 1 cut(s) | 23 |
| MseI | TTAA | 1 cut(s) | 262 |
| MspI | CCGG | 1 cut(s) | 24 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 55, 206 |
| NaeI | GCCGGC | 1 cut(s) | 25 |
| NgoMIV | GCCGGC | 1 cut(s) | 23 |
| NlaIII | CATG | 1 cut(s) | 169 |
| NspI | RCATGY | 1 cut(s) | 169 |
| PciI | ACATGT | 1 cut(s) | 165 |
| PdiI | GCCGGC | 1 cut(s) | 25 |
| PscI | ACATGT | 1 cut(s) | 165 |
| Psp124BI | GAGCTC | 1 cut(s) | 51 |
| PspFI | CCCAGC | 1 cut(s) | 238 |
| RsaI | GTAC | 1 cut(s) | 175 |
| RsaNI | GTAC | 1 cut(s) | 174 |
| SacI | GAGCTC | 1 cut(s) | 51 |
| SaqAI | TTAA | 1 cut(s) | 262 |
| SduI | GDGCHC | 1 cut(s) | 51 |
| SetI | ASST | 4 cut(s) | 51, 156, 175, 244 |
| SfaNI | GCATC | 2 cut(s) | 10, 133 |
| SfcI | CTRYAG | 1 cut(s) | 157 |
| Sse9I | AATT | 1 cut(s) | 257 |
| SsiI | CCGC | 2 cut(s) | 92, 218 |
| SstI | GAGCTC | 1 cut(s) | 51 |
| StyI | CCWWGG | 1 cut(s) | 138 |
| TasI | AATT | 1 cut(s) | 257 |
| Tru1I | TTAA | 1 cut(s) | 262 |
| Tru9I | TTAA | 1 cut(s) | 262 |
| TscAI | CASTG | 1 cut(s) | 211 |
| TspRI | CASTG | 1 cut(s) | 211 |
| XceI | RCATGY | 1 cut(s) | 169 |
| XmiI | GTMKAC | 1 cut(s) | 156 |