3'-phosphoinositide-dependent protein kinase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom07g16050 |
| rosa_laevigata | RLG00000019529 RLG00000020897 RLG00000029850 |
| rosa_multiflora | Rmu_sc0002276.1_g000006 |
| rosa_roxburghii | Rroxscaffold_3G00254280 Rroxscaffold_7G00196720 |
| rosa_samantha | Rh6CG165700 Rh6DG157300 Rh7CG171600 Rh7CG191000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 268 |
| AccI | GTMKAC | 2 cut(s) | 219, 255 |
| AcsI | RAATTY | 1 cut(s) | 68 |
| AfaI | GTAC | 1 cut(s) | 265 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 278 |
| AgsI | TTSAA | 2 cut(s) | 89, 123 |
| ApoI | RAATTY | 1 cut(s) | 68 |
| AsuHPI | GGTGA | 2 cut(s) | 65, 293 |
| BanI | GGYRCC | 1 cut(s) | 268 |
| BanII | GRGCYC | 1 cut(s) | 60 |
| BbsI | GAAGAC | 1 cut(s) | 149 |
| BccI | CCATC | 1 cut(s) | 84 |
| BceAI | ACGGC | 2 cut(s) | 238, 282 |
| BglII | AGATCT | 1 cut(s) | 99 |
| BmiI | GGNNCC | 2 cut(s) | 59, 270 |
| BmrI | ACTGGG | 1 cut(s) | 285 |
| BmuI | ACTGGG | 1 cut(s) | 285 |
| BpiI | GAAGAC | 1 cut(s) | 149 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 278 |
| Bse1I | ACTGG | 1 cut(s) | 280 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 278 |
| BseNI | ACTGG | 1 cut(s) | 280 |
| BshNI | GGYRCC | 1 cut(s) | 268 |
| BslFI | GGGAC | 1 cut(s) | 194 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 278 |
| BsmFI | GGGAC | 1 cut(s) | 194 |
| BsmI | GAATGC | 1 cut(s) | 296 |
| Bsp1286I | GDGCHC | 1 cut(s) | 60 |
| Bsp143I | GATC | 2 cut(s) | 99, 174 |
| BspLI | GGNNCC | 2 cut(s) | 59, 270 |
| BspT107I | GGYRCC | 1 cut(s) | 268 |
| BsrI | ACTGG | 1 cut(s) | 280 |
| BssMI | GATC | 2 cut(s) | 99, 174 |
| Bst4CI | ACNGT | 1 cut(s) | 263 |
| Bst6I | CTCTTC | 1 cut(s) | 201 |
| BstC8I | GCNNGC | 1 cut(s) | 51 |
| BstKTI | GATC | 2 cut(s) | 102, 177 |
| BstMBI | GATC | 2 cut(s) | 99, 174 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 55, 293 |
| BstV2I | GAAGAC | 1 cut(s) | 149 |
| BstX2I | RGATCY | 1 cut(s) | 99 |
| BstYI | RGATCY | 1 cut(s) | 99 |
| BtsIMutI | CAGTG | 1 cut(s) | 225 |
| Cac8I | GCNNGC | 1 cut(s) | 51 |
| Csp6I | GTAC | 1 cut(s) | 264 |
| CviJI | RGCY | 2 cut(s) | 37, 58 |
| CviKI_1 | RGCY | 2 cut(s) | 37, 58 |
| CviQI | GTAC | 1 cut(s) | 264 |
| DpnI | GATC | 2 cut(s) | 101, 176 |
| DpnII | GATC | 2 cut(s) | 99, 174 |
| Eam1104I | CTCTTC | 1 cut(s) | 201 |
| EarI | CTCTTC | 1 cut(s) | 201 |
| Eco24I | GRGCYC | 1 cut(s) | 60 |
| EcoT38I | GRGCYC | 1 cut(s) | 60 |
| FaiI | YATR | 2 cut(s) | 105, 118 |
| FaqI | GGGAC | 1 cut(s) | 194 |
| FblI | GTMKAC | 2 cut(s) | 219, 255 |
| FriOI | GRGCYC | 1 cut(s) | 60 |
| HinfI | GANTC | 1 cut(s) | 149 |
| HphI | GGTGA | 2 cut(s) | 65, 293 |
| Hpy166II | GTNNAC | 2 cut(s) | 220, 256 |
| Hpy188I | TCNGA | 1 cut(s) | 32 |
| Hpy188III | TCNNGA | 2 cut(s) | 80, 153 |
| Hpy8I | GTNNAC | 2 cut(s) | 220, 256 |
| HpyCH4III | ACNGT | 1 cut(s) | 263 |
| HpyCH4V | TGCA | 1 cut(s) | 53 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 55, 293 |
| Kzo9I | GATC | 2 cut(s) | 99, 174 |
| LmnI | GCTCC | 1 cut(s) | 63 |
| LpnPI | CCDG | 6 cut(s) | 39, 138, 163, 198, 261, 278 |
| MalI | GATC | 2 cut(s) | 101, 176 |
| MboI | GATC | 2 cut(s) | 99, 174 |
| MboII | GAAGA | 2 cut(s) | 154, 218 |
| MflI | RGATCY | 1 cut(s) | 99 |
| MhlI | GDGCHC | 1 cut(s) | 60 |
| MluCI | AATT | 3 cut(s) | 68, 89, 156 |
| MnlI | CCTC | 3 cut(s) | 187, 202, 238 |
| MseI | TTAA | 1 cut(s) | 170 |
| Mva1269I | GAATGC | 1 cut(s) | 296 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 55, 293 |
| NdeII | GATC | 2 cut(s) | 99, 174 |
| NlaIV | GGNNCC | 2 cut(s) | 59, 270 |
| PctI | GAATGC | 1 cut(s) | 296 |
| PfeI | GAWTC | 1 cut(s) | 149 |
| PspN4I | GGNNCC | 2 cut(s) | 59, 270 |
| PsuI | RGATCY | 1 cut(s) | 99 |
| RsaI | GTAC | 1 cut(s) | 265 |
| RsaNI | GTAC | 1 cut(s) | 264 |
| SaqAI | TTAA | 1 cut(s) | 170 |
| Sau3AI | GATC | 2 cut(s) | 99, 174 |
| SduI | GDGCHC | 1 cut(s) | 60 |
| SetI | ASST | 1 cut(s) | 129 |
| Sse9I | AATT | 3 cut(s) | 68, 89, 156 |
| TaaI | ACNGT | 1 cut(s) | 263 |
| TasI | AATT | 3 cut(s) | 68, 89, 156 |
| TfiI | GAWTC | 1 cut(s) | 149 |
| Tru1I | TTAA | 1 cut(s) | 170 |
| Tru9I | TTAA | 1 cut(s) | 170 |
| TscAI | CASTG | 1 cut(s) | 232 |
| TspDTI | ATGAA | 1 cut(s) | 105 |
| TspGWI | ACGGA | 1 cut(s) | 161 |
| TspRI | CASTG | 1 cut(s) | 232 |
| XapI | RAATTY | 1 cut(s) | 68 |
| XmiI | GTMKAC | 2 cut(s) | 219, 255 |