3-phosphoinositide-dependent protein kinase
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom07g16050 |
| rosa_laevigata | RLG00000019529 RLG00000020897 RLG00000029850 |
| rosa_multiflora | Rmu_sc0002276.1_g000006 |
| rosa_roxburghii | Rroxscaffold_3G00254280 Rroxscaffold_7G00196720 |
| rosa_samantha | Rh6CG165700 Rh6DG157300 Rh7CG171600 Rh7CG191000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 408 |
| AcsI | RAATTY | 5 cut(s) | 123, 154, 229, 284, 314 |
| AgsI | TTSAA | 3 cut(s) | 224, 335, 369 |
| Alw26I | GTCTC | 4 cut(s) | 32, 85, 91, 122 |
| ApoI | RAATTY | 5 cut(s) | 123, 154, 229, 284, 314 |
| AspS9I | GGNCC | 1 cut(s) | 427 |
| AsuHPI | GGTGA | 1 cut(s) | 311 |
| AvaII | GGWCC | 1 cut(s) | 427 |
| BanII | GRGCYC | 1 cut(s) | 306 |
| BccI | CCATC | 1 cut(s) | 330 |
| BcoDI | GTCTC | 4 cut(s) | 32, 85, 91, 122 |
| BglII | AGATCT | 1 cut(s) | 345 |
| Bme18I | GGWCC | 1 cut(s) | 427 |
| BmgT120I | GGNCC | 1 cut(s) | 427 |
| BmiI | GGNNCC | 1 cut(s) | 305 |
| BsaI | GGTCTC | 1 cut(s) | 122 |
| BseGI | GGATG | 1 cut(s) | 199 |
| BseMII | CTCAG | 3 cut(s) | 96, 102, 159 |
| BseRI | GAGGAG | 1 cut(s) | 68 |
| BsmAI | GTCTC | 4 cut(s) | 32, 85, 91, 122 |
| BsmI | GAATGC | 1 cut(s) | 47 |
| Bso31I | GGTCTC | 1 cut(s) | 122 |
| Bsp1286I | GDGCHC | 1 cut(s) | 306 |
| Bsp143I | GATC | 2 cut(s) | 345, 420 |
| BspCNI | CTCAG | 3 cut(s) | 95, 101, 158 |
| BspLI | GGNNCC | 1 cut(s) | 305 |
| BspTNI | GGTCTC | 1 cut(s) | 122 |
| BssMI | GATC | 2 cut(s) | 345, 420 |
| BstC8I | GCNNGC | 1 cut(s) | 292 |
| BstDEI | CTNAG | 3 cut(s) | 82, 88, 145 |
| BstF5I | GGATG | 1 cut(s) | 199 |
| BstKTI | GATC | 2 cut(s) | 348, 423 |
| BstMAI | GTCTC | 4 cut(s) | 32, 85, 91, 122 |
| BstMBI | GATC | 2 cut(s) | 345, 420 |
| BstX2I | RGATCY | 1 cut(s) | 345 |
| BstYI | RGATCY | 1 cut(s) | 345 |
| BtsCI | GGATG | 1 cut(s) | 199 |
| Cac8I | GCNNGC | 1 cut(s) | 292 |
| Cfr13I | GGNCC | 1 cut(s) | 427 |
| CviAII | CATG | 2 cut(s) | 113, 424 |
| CviJI | RGCY | 3 cut(s) | 70, 278, 304 |
| CviKI_1 | RGCY | 3 cut(s) | 70, 278, 304 |
| DdeI | CTNAG | 3 cut(s) | 82, 88, 145 |
| DpnI | GATC | 2 cut(s) | 347, 422 |
| DpnII | GATC | 2 cut(s) | 345, 420 |
| Eco24I | GRGCYC | 1 cut(s) | 306 |
| Eco31I | GGTCTC | 1 cut(s) | 122 |
| Eco47I | GGWCC | 1 cut(s) | 427 |
| EcoRI | GAATTC | 3 cut(s) | 123, 154, 229 |
| EcoT38I | GRGCYC | 1 cut(s) | 306 |
| FaeI | CATG | 2 cut(s) | 116, 427 |
| FaiI | YATR | 6 cut(s) | 67, 96, 114, 351, 364, 425 |
| FatI | CATG | 2 cut(s) | 112, 423 |
| FblI | GTMKAC | 1 cut(s) | 408 |
| FokI | GGATG | 1 cut(s) | 206 |
| FriOI | GRGCYC | 1 cut(s) | 306 |
| Hin1II | CATG | 2 cut(s) | 116, 427 |
| HincII | GTYRAC | 1 cut(s) | 21 |
| HindII | GTYRAC | 1 cut(s) | 21 |
| HinfI | GANTC | 3 cut(s) | 173, 220, 395 |
| HphI | GGTGA | 1 cut(s) | 311 |
| Hpy166II | GTNNAC | 2 cut(s) | 21, 409 |
| Hpy188I | TCNGA | 5 cut(s) | 122, 153, 172, 178, 273 |
| Hpy188III | TCNNGA | 3 cut(s) | 100, 326, 399 |
| Hpy8I | GTNNAC | 2 cut(s) | 21, 409 |
| HpyAV | CCTTC | 1 cut(s) | 385 |
| HpyCH4V | TGCA | 1 cut(s) | 294 |
| HpyF3I | CTNAG | 3 cut(s) | 82, 88, 145 |
| Hsp92II | CATG | 2 cut(s) | 116, 427 |
| Kzo9I | GATC | 2 cut(s) | 345, 420 |
| LmnI | GCTCC | 1 cut(s) | 309 |
| LpnPI | CCDG | 3 cut(s) | 132, 280, 384 |
| MalI | GATC | 2 cut(s) | 347, 422 |
| MboI | GATC | 2 cut(s) | 345, 420 |
| MboII | GAAGA | 5 cut(s) | 48, 51, 209, 225, 400 |
| MflI | RGATCY | 1 cut(s) | 345 |
| MhlI | GDGCHC | 1 cut(s) | 306 |
| MluCI | AATT | 8 cut(s) | 4, 123, 154, 229, 284, 314, 335, 402 |
| MnlI | CCTC | 4 cut(s) | 46, 49, 247, 432 |
| MseI | TTAA | 4 cut(s) | 129, 138, 215, 416 |
| Mva1269I | GAATGC | 1 cut(s) | 47 |
| NdeII | GATC | 2 cut(s) | 345, 420 |
| NlaIII | CATG | 2 cut(s) | 116, 427 |
| NlaIV | GGNNCC | 1 cut(s) | 305 |
| PctI | GAATGC | 1 cut(s) | 47 |
| PfeI | GAWTC | 3 cut(s) | 173, 220, 395 |
| PspN4I | GGNNCC | 1 cut(s) | 305 |
| PspPI | GGNCC | 1 cut(s) | 427 |
| PsuI | RGATCY | 1 cut(s) | 345 |
| SaqAI | TTAA | 4 cut(s) | 129, 138, 215, 416 |
| Sau3AI | GATC | 2 cut(s) | 345, 420 |
| Sau96I | GGNCC | 1 cut(s) | 427 |
| SduI | GDGCHC | 1 cut(s) | 306 |
| SetI | ASST | 2 cut(s) | 151, 375 |
| SinI | GGWCC | 1 cut(s) | 427 |
| Sse9I | AATT | 8 cut(s) | 4, 123, 154, 229, 284, 314, 335, 402 |
| TaqI | TCGA | 1 cut(s) | 51 |
| TasI | AATT | 8 cut(s) | 4, 123, 154, 229, 284, 314, 335, 402 |
| TfiI | GAWTC | 3 cut(s) | 173, 220, 395 |
| Tru1I | TTAA | 4 cut(s) | 129, 138, 215, 416 |
| Tru9I | TTAA | 4 cut(s) | 129, 138, 215, 416 |
| TspDTI | ATGAA | 5 cut(s) | 17, 101, 175, 210, 351 |
| TspGWI | ACGGA | 1 cut(s) | 206 |
| VpaK11BI | GGWCC | 1 cut(s) | 427 |
| XapI | RAATTY | 5 cut(s) | 123, 154, 229, 284, 314 |
| XmiI | GTMKAC | 1 cut(s) | 408 |