Rmu_sc0003078.1_g000007

Carboxylesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003078.1
OG0023078
Physical Location & Seq
Reverse (-)
50532 .. 53933
3402 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003078.1_g000007.1.cds

Sequence Viewer

Length: 978 bp
atgattcatactatcagttttgtcaaaaattcacgactaactagctcaaaaacacgaaatacacctgaaatcactctagcccaatcatccttaaaccaaaatctggaagatctcagcactttcctacatgattggagaagtttctcagtgatctcttggcctaagtcctcgagctctggaatagcaaacaataatagcttccctactggctcgctcttacttaagcaccttcaactaggcgaagaggagcaacggcgaaagcaacctatcagctgcgtcggggtggtacctgacctttgccccattctaaacttcagtacctcacgttcagataatatcaaaacgatacctcaggttctgaccccgaccgaagaatgtcccaacaatccactccctcctcctgggctttgctcccttggaggacccttaacggacgccgctcgccgaccaaacggcaccatcaaccgccgtctcatgagcttcctcgacttacgctcctccgccactccctcagccccctacaaaggcgtcaccacctccgacgtcaccgtcgaccaaacctgcaagctctggttccgcttcttcgtcccttctacgacatcgtcttcccccgcctctttacccgtcgtctttttcttccacggcagcggcttcagctttctcagccccgactcctacgcctacgacgccgtctgccgcaaattggcctgcgaaatctccgtcgtcgtagtctccgtcaactaccacctctcccctgagaacggctacccctgccagctccggcgctcgacacggccctctctccctctctcccctccagctccaacgttcgacccatgccatctccctctctcctccagctgcggcgacgacacagcaactcggagatcggaggaatataccggcttcgtttgcggtttcatgtggtgtcgtcttcatcctctctctcccgtccttgtccacgccggtgccgtctag

Protein Analysis

325

Amino Acids

35.57

Weight (kDa)

8.45

Isoelectric Point (pI)

72.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0023078)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0002028.1_g000006 Rmu_sc0003078.1_g000007 Rmu_sc0006986.1_g000021 Rmu_sc0017397.1_g000005

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 548
AatII GACGTC 1 cut(s) 546
Acc36I ACCTGC 1 cut(s) 569
Acc65I GGTACC 1 cut(s) 286
AccB1I GGYRCC 3 cut(s) 286, 455, 968
AccB7I CCANNNNNTGG 1 cut(s) 103
AccBSI CCGCTC 1 cut(s) 440
AccI GTMKAC 1 cut(s) 552
AciI CCGC 9 cut(s) 438, 466, 501, 577, 612, 648, 697, 864, 915
AclI AACGTT 1 cut(s) 827
AcsI RAATTY 1 cut(s) 28
AcuI CTGAAG 2 cut(s) 298, 637
AcyI GRCGYC 4 cut(s) 435, 528, 543, 687
AfaI GTAC 2 cut(s) 288, 319
AfiI CCNNNNNNNGG 5 cut(s) 103, 401, 524, 703, 761
AflII CTTAAG 1 cut(s) 221
AgsI TTSAA 1 cut(s) 233
AjnI CCWGG 1 cut(s) 400
AleI CACNNNNGTG 1 cut(s) 966
Alw21I GWGCWC 1 cut(s) 176
Alw26I GTCTC 2 cut(s) 476, 736
AlwNI CAGNNNCTG 1 cut(s) 358
Ama87I CYCGRG 1 cut(s) 169
AoxI GGCC 3 cut(s) 158, 705, 794
ApeKI GCWGC 3 cut(s) 273, 645, 861
ApoI RAATTY 1 cut(s) 28
ArsI GACNNNNNNTTYG 2 cut(s) 705, 737
Asp718I GGTACC 1 cut(s) 286
AspLEI GCGC 1 cut(s) 786
AspS9I GGNCC 2 cut(s) 422, 795
AsuHPI GGTGA 2 cut(s) 523, 538
AvaI CYCGRG 1 cut(s) 169
AvaII GGWCC 1 cut(s) 422
AxyI CCTNAGG 1 cut(s) 351
BaeI ACNNNNGTAYC 2 cut(s) 301, 334
BanI GGYRCC 3 cut(s) 286, 455, 968
BanII GRGCYC 1 cut(s) 176
BbsI GAAGAC 2 cut(s) 597, 926
Bbv12I GWGCWC 1 cut(s) 176
BbvCI CCTCAGC 1 cut(s) 511
BbvI GCAGC 3 cut(s) 260, 657, 848
BccI CCATC 2 cut(s) 467, 849
BceAI ACGGC 8 cut(s) 269, 453, 469, 658, 674, 778, 809, 956
BciT130I CCWGG 1 cut(s) 402
BcoDI GTCTC 2 cut(s) 476, 736
BfaI CTAG 4 cut(s) 42, 77, 236, 976
BfoI RGCGCY 1 cut(s) 787
BfrI CTTAAG 1 cut(s) 221
BfuAI ACCTGC 1 cut(s) 569
BglII AGATCT 1 cut(s) 109
BisI GCNGC 7 cut(s) 274, 438, 646, 649, 697, 862, 865
BlsI GCNGC 7 cut(s) 275, 439, 647, 650, 698, 863, 866
Bme1390I CCNGG 1 cut(s) 402
Bme18I GGWCC 1 cut(s) 422
BmeT110I CYCGRG 1 cut(s) 169
BmgT120I GGNCC 2 cut(s) 422, 795
BmiI GGNNCC 5 cut(s) 288, 424, 457, 575, 970
BmrFI CCNGG 1 cut(s) 402
BpiI GAAGAC 2 cut(s) 597, 926
BpmI CTGGAG 2 cut(s) 801, 841
Bpu10I CCTNAGC 1 cut(s) 511
BsaHI GRCGYC 4 cut(s) 435, 528, 543, 687
BsaJI CCNNGG 3 cut(s) 401, 415, 640
BsaXI ACNNNNNCTCC 4 cut(s) 479, 509, 734, 764
Bsc4I CCNNNNNNNGG 5 cut(s) 103, 401, 524, 703, 761
Bse118I RCCGGY 2 cut(s) 902, 965
Bse1I ACTGG 1 cut(s) 211
Bse21I CCTNAGG 1 cut(s) 351
BseBI CCWGG 1 cut(s) 402
BseDI CCNNGG 3 cut(s) 401, 415, 640
BseGI GGATG 2 cut(s) 86, 937
BseLI CCNNNNNNNGG 5 cut(s) 103, 401, 524, 703, 761
BseMII CTCAG 6 cut(s) 127, 159, 365, 525, 676, 747
BseNI ACTGG 1 cut(s) 211
BseRI GAGGAG 4 cut(s) 260, 387, 487, 844
BseXI GCAGC 3 cut(s) 260, 657, 848
Bsh1285I CGRYCG 1 cut(s) 369
BshFI GGCC 3 cut(s) 160, 707, 796
BshNI GGYRCC 3 cut(s) 286, 455, 968
BsiEI CGRYCG 1 cut(s) 369
BsiHKAI GWGCWC 1 cut(s) 176
BsiHKCI CYCGRG 1 cut(s) 169
BsiSI CCGG 3 cut(s) 781, 903, 966
BslFI GGGAC 2 cut(s) 363, 572
BslI CCNNNNNNNGG 5 cut(s) 103, 401, 524, 703, 761
BsmAI GTCTC 2 cut(s) 476, 736
BsmBI CGTCTC 1 cut(s) 476
BsmFI GGGAC 2 cut(s) 363, 572
BsnI GGCC 3 cut(s) 160, 707, 796
BsoBI CYCGRG 1 cut(s) 169
Bsp1286I GDGCHC 1 cut(s) 176
Bsp143I GATC 3 cut(s) 109, 150, 887
BspACI CCGC 9 cut(s) 438, 466, 501, 577, 612, 648, 697, 864, 915
BspANI GGCC 3 cut(s) 160, 707, 796
BspCNI CTCAG 6 cut(s) 126, 158, 364, 524, 675, 748
BspHI TCATGA 1 cut(s) 474
BspLI GGNNCC 5 cut(s) 288, 424, 457, 575, 970
BspMI ACCTGC 1 cut(s) 569
BspT107I GGYRCC 3 cut(s) 286, 455, 968
BspTI CTTAAG 1 cut(s) 221
BsrBI CCGCTC 1 cut(s) 440
BsrFI RCCGGY 2 cut(s) 902, 965
BsrI ACTGG 1 cut(s) 211
BssAI RCCGGY 2 cut(s) 902, 965
BssECI CCNNGG 3 cut(s) 401, 415, 640
BssMI GATC 3 cut(s) 109, 150, 887
BssNI GRCGYC 4 cut(s) 435, 528, 543, 687
BssT1I CCWWGG 1 cut(s) 415
Bst2UI CCWGG 1 cut(s) 402
Bst4CI ACNGT 1 cut(s) 550
Bst6I CTCTTC 1 cut(s) 237
BstACI GRCGYC 4 cut(s) 435, 528, 543, 687
BstAFI CTTAAG 1 cut(s) 221
BstC8I GCNNGC 5 cut(s) 212, 442, 566, 709, 776
BstDEI CTNAG 7 cut(s) 113, 145, 162, 351, 511, 662, 756
BstDSI CCRYGG 1 cut(s) 640
BstF5I GGATG 2 cut(s) 86, 937
BstH2I RGCGCY 1 cut(s) 787
BstHHI GCGC 1 cut(s) 786
BstKTI GATC 3 cut(s) 112, 153, 890
BstMAI GTCTC 2 cut(s) 476, 736
BstMBI GATC 3 cut(s) 109, 150, 887
BstMCI CGRYCG 1 cut(s) 369
BstMWI GCNNNNNNNGC 5 cut(s) 654, 663, 686, 771, 912
BstNI CCWGG 1 cut(s) 402
BstSCI CCNGG 1 cut(s) 400
BstV1I GCAGC 3 cut(s) 260, 657, 848
BstV2I GAAGAC 2 cut(s) 597, 926
BstX2I RGATCY 1 cut(s) 109
BstYI RGATCY 1 cut(s) 109
Bsu36I CCTNAGG 1 cut(s) 351
BsuRI GGCC 3 cut(s) 160, 707, 796
BtgI CCRYGG 1 cut(s) 640
BtsCI GGATG 2 cut(s) 86, 937
BtsIMutI CAGTG 1 cut(s) 153
BveI ACCTGC 1 cut(s) 569
Cac8I GCNNGC 5 cut(s) 212, 442, 566, 709, 776
CaiI CAGNNNCTG 1 cut(s) 358
CciI TCATGA 1 cut(s) 474
CfoI GCGC 1 cut(s) 786
Cfr10I RCCGGY 2 cut(s) 902, 965
Cfr13I GGNCC 2 cut(s) 422, 795
CseI GACGC 4 cut(s) 265, 443, 517, 695
Csp6I GTAC 2 cut(s) 287, 318
CviAII CATG 4 cut(s) 128, 475, 837, 922
CviQI GTAC 2 cut(s) 287, 318
DdeI CTNAG 7 cut(s) 113, 145, 162, 351, 511, 662, 756
DpnI GATC 3 cut(s) 111, 152, 889
DpnII GATC 3 cut(s) 109, 150, 887
DrdI GACNNNNNNGTC 1 cut(s) 548
DseDI GACNNNNNNGTC 1 cut(s) 548
Eam1104I CTCTTC 1 cut(s) 237
EarI CTCTTC 1 cut(s) 237
EciI GGCGGA 1 cut(s) 490
Ecl136II GAGCTC 1 cut(s) 174
Eco130I CCWWGG 1 cut(s) 415
Eco24I GRGCYC 1 cut(s) 176
Eco47I GGWCC 1 cut(s) 422
Eco53kI GAGCTC 1 cut(s) 174
Eco57I CTGAAG 2 cut(s) 298, 637
Eco81I CCTNAGG 1 cut(s) 351
Eco88I CYCGRG 1 cut(s) 169
EcoICRI GAGCTC 1 cut(s) 174
EcoO109I RGGNCCY 1 cut(s) 422
EcoRII CCWGG 1 cut(s) 400
EcoT14I CCWWGG 1 cut(s) 415
EcoT38I GRGCYC 1 cut(s) 176
ErhI CCWWGG 1 cut(s) 415
Esp3I CGTCTC 1 cut(s) 476
FaeI CATG 4 cut(s) 131, 478, 840, 925
FaiI YATR 6 cut(s) 9, 129, 476, 838, 900, 923
FaqI GGGAC 2 cut(s) 363, 572
FatI CATG 4 cut(s) 127, 474, 836, 921
FauI CCCGC 1 cut(s) 619
FblI GTMKAC 1 cut(s) 552
Fnu4HI GCNGC 7 cut(s) 274, 438, 646, 649, 697, 862, 865
FokI GGATG 2 cut(s) 73, 924
FriOI GRGCYC 1 cut(s) 176
Fsp4HI GCNGC 7 cut(s) 274, 438, 646, 649, 697, 862, 865
FspBI CTAG 4 cut(s) 42, 77, 236, 976
GlaI GCGC 1 cut(s) 785
GluI GCNGC 7 cut(s) 274, 438, 646, 649, 697, 862, 865
GsuI CTGGAG 2 cut(s) 801, 841
HaeII RGCGCY 1 cut(s) 787
HaeIII GGCC 3 cut(s) 160, 707, 796
HapII CCGG 3 cut(s) 781, 903, 966
HgaI GACGC 4 cut(s) 265, 443, 517, 695
HhaI GCGC 1 cut(s) 786
Hin1I GRCGYC 4 cut(s) 435, 528, 543, 687
Hin1II CATG 4 cut(s) 131, 478, 840, 925
Hin6I GCGC 1 cut(s) 784
HinP1I GCGC 1 cut(s) 784
HincII GTYRAC 2 cut(s) 553, 739
HindII GTYRAC 2 cut(s) 553, 739
HinfI GANTC 2 cut(s) 4, 671
HpaII CCGG 3 cut(s) 781, 903, 966
HphI GGTGA 2 cut(s) 523, 538
Hpy166II GTNNAC 3 cut(s) 553, 739, 961
Hpy188I TCNGA 5 cut(s) 331, 360, 541, 885, 892
Hpy188III TCNNGA 4 cut(s) 33, 104, 177, 475
Hpy8I GTNNAC 3 cut(s) 553, 739, 961
Hpy99I CGWCG 8 cut(s) 281, 545, 554, 629, 689, 725, 728, 872
HpyAV CCTTC 2 cut(s) 239, 600
HpyCH4III ACNGT 1 cut(s) 550
HpyCH4IV ACGT 3 cut(s) 325, 543, 827
HpyCH4V TGCA 1 cut(s) 564
HpyF10VI GCNNNNNNNGC 5 cut(s) 654, 663, 686, 771, 912
HpyF3I CTNAG 7 cut(s) 113, 145, 162, 351, 511, 662, 756
HpySE526I ACGT 3 cut(s) 325, 543, 827
Hsp92I GRCGYC 4 cut(s) 435, 528, 543, 687
Hsp92II CATG 4 cut(s) 131, 478, 840, 925
HspAI GCGC 1 cut(s) 784
KpnI GGTACC 1 cut(s) 290
Kzo9I GATC 3 cut(s) 109, 150, 887
LmnI GCTCC 5 cut(s) 247, 416, 500, 783, 826
Lsp1109I GCAGC 3 cut(s) 260, 657, 848
MaeI CTAG 4 cut(s) 42, 77, 236, 976
MaeII ACGT 3 cut(s) 325, 543, 827
MaeIII GTNAC 2 cut(s) 529, 544
MalI GATC 3 cut(s) 111, 152, 889
MbiI CCGCTC 1 cut(s) 440
MboI GATC 3 cut(s) 109, 150, 887
MboII GAAGA 7 cut(s) 119, 254, 383, 574, 597, 628, 926
MflI RGATCY 1 cut(s) 109
MhlI GDGCHC 1 cut(s) 176
MluCI AATT 2 cut(s) 28, 701
MlyI GAGTC 1 cut(s) 665
MmeI TCCRAC 2 cut(s) 564, 848
MseI TTAA 3 cut(s) 92, 222, 428
MslI CAYNNNNRTG 1 cut(s) 966
MspA1I CMGCKG 3 cut(s) 273, 648, 861
MspCI CTTAAG 1 cut(s) 221
MspI CCGG 3 cut(s) 781, 903, 966
MspR9I CCNGG 1 cut(s) 402
MvaI CCWGG 1 cut(s) 402
MwoI GCNNNNNNNGC 5 cut(s) 654, 663, 686, 771, 912
NdeII GATC 3 cut(s) 109, 150, 887
NlaIII CATG 4 cut(s) 131, 478, 840, 925
NlaIV GGNNCC 5 cut(s) 288, 424, 457, 575, 970
NmuCI GTSAC 2 cut(s) 529, 544
OliI CACNNNNGTG 1 cut(s) 966
PaeR7I CTCGAG 1 cut(s) 169
PagI TCATGA 1 cut(s) 474
PcsI WCGNNNNNNNCGW 3 cut(s) 549, 732, 969
PfeI GAWTC 1 cut(s) 4
PflFI GACNNNGTC 2 cut(s) 601, 689
PflMI CCANNNNNTGG 1 cut(s) 103
PkrI GCNGC 7 cut(s) 275, 439, 647, 650, 698, 863, 866
PleI GAGTC 1 cut(s) 665
PpsI GAGTC 1 cut(s) 665
PpuMI RGGWCCY 1 cut(s) 422
Psp124BI GAGCTC 1 cut(s) 176
Psp1406I AACGTT 1 cut(s) 827
Psp5II RGGWCCY 1 cut(s) 422
Psp6I CCWGG 1 cut(s) 400
PspGI CCWGG 1 cut(s) 400
PspN4I GGNNCC 5 cut(s) 288, 424, 457, 575, 970
PspPI GGNCC 2 cut(s) 422, 795
PspPPI RGGWCCY 1 cut(s) 422
PspXI VCTCGAGB 1 cut(s) 169
PsrI GAACNNNNNNTAC 2 cut(s) 310, 342
PstNI CAGNNNCTG 1 cut(s) 358
PsuI RGATCY 1 cut(s) 109
PsyI GACNNNGTC 2 cut(s) 601, 689
PvuII CAGCTG 2 cut(s) 273, 861
RsaI GTAC 2 cut(s) 288, 319
RsaNI GTAC 2 cut(s) 287, 318
RseI CAYNNNNRTG 1 cut(s) 966
SacI GAGCTC 1 cut(s) 176
SalI GTCGAC 1 cut(s) 551
SaqAI TTAA 3 cut(s) 92, 222, 428
SatI GCNGC 7 cut(s) 274, 438, 646, 649, 697, 862, 865
Sau3AI GATC 3 cut(s) 109, 150, 887
Sau96I GGNCC 2 cut(s) 422, 795
SchI GAGTC 1 cut(s) 665
ScrFI CCNGG 1 cut(s) 402
SduI GDGCHC 1 cut(s) 176
Sfr274I CTCGAG 1 cut(s) 169
SgrAI CRCCGGYG 1 cut(s) 965
SinI GGWCC 1 cut(s) 422
SlaI CTCGAG 1 cut(s) 169
SmiMI CAYNNNNRTG 1 cut(s) 966
SmlI CTYRAG 2 cut(s) 169, 221
SmoI CTYRAG 2 cut(s) 169, 221
Sse9I AATT 2 cut(s) 28, 701
SsiI CCGC 9 cut(s) 438, 466, 501, 577, 612, 648, 697, 864, 915
SspMI CTAG 4 cut(s) 42, 77, 236, 976
SstI GAGCTC 1 cut(s) 176
StyD4I CCNGG 1 cut(s) 400
StyI CCWWGG 1 cut(s) 415
TaaI ACNGT 1 cut(s) 550
TaiI ACGT 3 cut(s) 328, 546, 830
TaqI TCGA 5 cut(s) 170, 486, 552, 788, 831
TaqII GACCGA 1 cut(s) 383
TasI AATT 2 cut(s) 28, 701
TauI GCSGC 4 cut(s) 440, 651, 699, 867
TfiI GAWTC 1 cut(s) 4
Tru1I TTAA 3 cut(s) 92, 222, 428
Tru9I TTAA 3 cut(s) 92, 222, 428
TscAI CASTG 1 cut(s) 153
TseFI GTSAC 2 cut(s) 529, 544
TseI GCWGC 3 cut(s) 273, 645, 861
Tsp45I GTSAC 2 cut(s) 529, 544
TspDTI ATGAA 2 cut(s) 910, 926
TspGWI ACGGA 3 cut(s) 446, 709, 724
TspRI CASTG 1 cut(s) 153
Tth111I GACNNNGTC 2 cut(s) 601, 689
Van91I CCANNNNNTGG 1 cut(s) 103
Vha464I CTTAAG 1 cut(s) 221
VpaK11BI GGWCC 1 cut(s) 422
XapI RAATTY 1 cut(s) 28
XhoI CTCGAG 1 cut(s) 169
XmiI GTMKAC 1 cut(s) 552
XspI CTAG 4 cut(s) 42, 77, 236, 976
ZraI GACGTC 1 cut(s) 544
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.