f-box protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g15981 FvH4_6g15981 |
| rosa_multiflora | Rmu_sc0003573.1_g000018 Rmu_sc0008403.1_g000003 Rmu_sc0034457.1_g000001 |
| rosa_samantha | Rh3AG153000 Rh3BG176900 Rh3BG177000 Rh3CG167800 Rh3CG167900 Rh3DG198700 Rh3DG198800 Rh4DG139400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 140 |
| Acc16I | TGCGCA | 1 cut(s) | 1293 |
| AccI | GTMKAC | 1 cut(s) | 1104 |
| AccII | CGCG | 3 cut(s) | 231, 384, 946 |
| AccIII | TCCGGA | 1 cut(s) | 66 |
| AclWI | GGATC | 3 cut(s) | 50, 77, 625 |
| AcoI | YGGCCR | 3 cut(s) | 78, 351, 379 |
| AcsI | RAATTY | 4 cut(s) | 497, 1148, 1221, 1229 |
| AcuI | CTGAAG | 2 cut(s) | 448, 633 |
| AdeI | CACNNNGTG | 1 cut(s) | 1066 |
| AfaI | GTAC | 3 cut(s) | 106, 185, 873 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 640 |
| AflIII | ACRYGT | 1 cut(s) | 330 |
| AgsI | TTSAA | 5 cut(s) | 310, 525, 1028, 1148, 1229 |
| AjnI | CCWGG | 1 cut(s) | 713 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 317, 349 |
| AluBI | AGCT | 8 cut(s) | 169, 575, 589, 617, 730, 1044, 1053, 1116 |
| AluI | AGCT | 8 cut(s) | 169, 575, 589, 617, 730, 1044, 1053, 1116 |
| Alw21I | GWGCWC | 6 cut(s) | 45, 495, 591, 765, 832, 885 |
| Alw26I | GTCTC | 4 cut(s) | 229, 784, 1199, 1316 |
| AlwI | GGATC | 3 cut(s) | 50, 77, 625 |
| Aor13HI | TCCGGA | 1 cut(s) | 66 |
| AoxI | GGCC | 5 cut(s) | 78, 195, 351, 379, 696 |
| ApeKI | GCWGC | 5 cut(s) | 248, 801, 993, 1002, 1005 |
| ApoI | RAATTY | 4 cut(s) | 497, 1148, 1221, 1229 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 317, 349 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 576 |
| AspLEI | GCGC | 1 cut(s) | 1294 |
| AspS9I | GGNCC | 2 cut(s) | 142, 478 |
| AsuC2I | CCSGG | 3 cut(s) | 542, 927, 1109 |
| AsuHPI | GGTGA | 3 cut(s) | 125, 271, 1106 |
| AvaII | GGWCC | 2 cut(s) | 142, 478 |
| BaeGI | GKGCMC | 1 cut(s) | 1062 |
| BalI | TGGCCA | 1 cut(s) | 353 |
| BanII | GRGCYC | 1 cut(s) | 591 |
| BbsI | GAAGAC | 1 cut(s) | 1244 |
| Bbv12I | GWGCWC | 6 cut(s) | 45, 495, 591, 765, 832, 885 |
| BbvI | GCAGC | 5 cut(s) | 260, 788, 1005, 1014, 1017 |
| BccI | CCATC | 2 cut(s) | 683, 1244 |
| BceAI | ACGGC | 1 cut(s) | 1293 |
| BciT130I | CCWGG | 1 cut(s) | 715 |
| BclI | TGATCA | 1 cut(s) | 27 |
| BcnI | CCSGG | 3 cut(s) | 542, 927, 1109 |
| BcoDI | GTCTC | 4 cut(s) | 229, 784, 1199, 1316 |
| BisI | GCNGC | 9 cut(s) | 81, 249, 382, 385, 802, 994, 1003, 1006, 1285 |
| BlpI | GCTNAGC | 1 cut(s) | 1040 |
| BlsI | GCNGC | 9 cut(s) | 82, 250, 383, 386, 803, 995, 1004, 1007, 1286 |
| BmcAI | AGTACT | 1 cut(s) | 106 |
| Bme1390I | CCNGG | 4 cut(s) | 542, 715, 927, 1109 |
| Bme18I | GGWCC | 2 cut(s) | 142, 478 |
| BmgT120I | GGNCC | 2 cut(s) | 142, 478 |
| BmiI | GGNNCC | 4 cut(s) | 290, 772, 819, 924 |
| BmrFI | CCNGG | 4 cut(s) | 542, 715, 927, 1109 |
| BmsI | GCATC | 4 cut(s) | 43, 198, 207, 1145 |
| BpiI | GAAGAC | 1 cut(s) | 1244 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 578, 610 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1054 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1040 |
| BpuEI | CTTGAG | 3 cut(s) | 585, 1194, 1223 |
| BpuMI | CCSGG | 3 cut(s) | 542, 927, 1109 |
| BsaJI | CCNNGG | 7 cut(s) | 372, 382, 474, 514, 699, 713, 766 |
| BsaWI | WCCGGW | 1 cut(s) | 66 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 640 |
| Bse118I | RCCGGY | 3 cut(s) | 110, 256, 998 |
| Bse3DI | GCAATG | 1 cut(s) | 1259 |
| BseAI | TCCGGA | 1 cut(s) | 66 |
| BseBI | CCWGG | 1 cut(s) | 715 |
| BseDI | CCNNGG | 7 cut(s) | 372, 382, 474, 514, 699, 713, 766 |
| BseGI | GGATG | 2 cut(s) | 417, 1136 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 640 |
| BseMI | GCAATG | 1 cut(s) | 1259 |
| BseMII | CTCAG | 1 cut(s) | 1031 |
| BseRI | GAGGAG | 2 cut(s) | 659, 755 |
| BseSI | GKGCMC | 1 cut(s) | 1062 |
| BseX3I | CGGCCG | 1 cut(s) | 78 |
| BseXI | GCAGC | 5 cut(s) | 260, 788, 1005, 1014, 1017 |
| BseYI | CCCAGC | 1 cut(s) | 169 |
| Bsh1236I | CGCG | 3 cut(s) | 231, 384, 946 |
| Bsh1285I | CGRYCG | 1 cut(s) | 81 |
| BshFI | GGCC | 5 cut(s) | 80, 197, 353, 381, 698 |
| BsiEI | CGRYCG | 1 cut(s) | 81 |
| BsiHKAI | GWGCWC | 6 cut(s) | 45, 495, 591, 765, 832, 885 |
| BsiSI | CCGG | 7 cut(s) | 67, 111, 257, 541, 927, 999, 1108 |
| BslFI | GGGAC | 3 cut(s) | 73, 252, 532 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 640 |
| BsmAI | GTCTC | 4 cut(s) | 229, 784, 1199, 1316 |
| BsmBI | CGTCTC | 2 cut(s) | 784, 1316 |
| BsmFI | GGGAC | 3 cut(s) | 73, 252, 532 |
| BsmI | GAATGC | 1 cut(s) | 871 |
| BsnI | GGCC | 5 cut(s) | 80, 197, 353, 381, 698 |
| Bsp1286I | GDGCHC | 7 cut(s) | 45, 495, 591, 765, 832, 885, 1062 |
| Bsp13I | TCCGGA | 1 cut(s) | 66 |
| Bsp1407I | TGTACA | 1 cut(s) | 183 |
| Bsp143I | GATC | 7 cut(s) | 27, 55, 69, 405, 630, 796, 1276 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1040 |
| BspANI | GGCC | 5 cut(s) | 80, 197, 353, 381, 698 |
| BspCNI | CTCAG | 1 cut(s) | 1032 |
| BspEI | TCCGGA | 1 cut(s) | 66 |
| BspFNI | CGCG | 3 cut(s) | 231, 384, 946 |
| BspLI | GGNNCC | 4 cut(s) | 290, 772, 819, 924 |
| BspPI | GGATC | 3 cut(s) | 50, 77, 625 |
| BspQI | GCTCTTC | 1 cut(s) | 582 |
| BsrDI | GCAATG | 1 cut(s) | 1259 |
| BsrFI | RCCGGY | 3 cut(s) | 110, 256, 998 |
| BsrGI | TGTACA | 1 cut(s) | 183 |
| BssAI | RCCGGY | 3 cut(s) | 110, 256, 998 |
| BssECI | CCNNGG | 7 cut(s) | 372, 382, 474, 514, 699, 713, 766 |
| BssMI | GATC | 7 cut(s) | 27, 55, 69, 405, 630, 796, 1276 |
| BssNAI | GTATAC | 1 cut(s) | 1105 |
| BssT1I | CCWWGG | 3 cut(s) | 372, 474, 699 |
| Bst1107I | GTATAC | 1 cut(s) | 1105 |
| Bst2UI | CCWGG | 1 cut(s) | 715 |
| Bst4CI | ACNGT | 4 cut(s) | 142, 240, 301, 529 |
| Bst6I | CTCTTC | 2 cut(s) | 582, 601 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 40, 875 |
| BstAUI | TGTACA | 1 cut(s) | 183 |
| BstC8I | GCNNGC | 4 cut(s) | 246, 379, 547, 1162 |
| BstDEI | CTNAG | 2 cut(s) | 1040, 1054 |
| BstDSI | CCRYGG | 2 cut(s) | 382, 514 |
| BstF5I | GGATG | 2 cut(s) | 417, 1136 |
| BstFNI | CGCG | 3 cut(s) | 231, 384, 946 |
| BstHHI | GCGC | 1 cut(s) | 1294 |
| BstKTI | GATC | 7 cut(s) | 30, 58, 72, 408, 633, 799, 1279 |
| BstMAI | GTCTC | 4 cut(s) | 229, 784, 1199, 1316 |
| BstMBI | GATC | 7 cut(s) | 27, 55, 69, 405, 630, 796, 1276 |
| BstMCI | CGRYCG | 1 cut(s) | 81 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 40, 49, 546, 875, 999, 1002, 1050, 1314 |
| BstNI | CCWGG | 1 cut(s) | 715 |
| BstNSI | RCATGY | 1 cut(s) | 878 |
| BstSCI | CCNGG | 4 cut(s) | 540, 713, 925, 1107 |
| BstSLI | GKGCMC | 1 cut(s) | 1062 |
| BstUI | CGCG | 3 cut(s) | 231, 384, 946 |
| BstV1I | GCAGC | 5 cut(s) | 260, 788, 1005, 1014, 1017 |
| BstV2I | GAAGAC | 1 cut(s) | 1244 |
| BstX2I | RGATCY | 2 cut(s) | 55, 630 |
| BstYI | RGATCY | 2 cut(s) | 55, 630 |
| BstZ17I | GTATAC | 1 cut(s) | 1105 |
| BstZI | CGGCCG | 1 cut(s) | 78 |
| BsuRI | GGCC | 5 cut(s) | 80, 197, 353, 381, 698 |
| BtgI | CCRYGG | 2 cut(s) | 382, 514 |
| BtgZI | GCGATG | 1 cut(s) | 702 |
| BtsCI | GGATG | 2 cut(s) | 417, 1136 |
| BtsIMutI | CAGTG | 1 cut(s) | 297 |
| Cac8I | GCNNGC | 4 cut(s) | 246, 379, 547, 1162 |
| CfoI | GCGC | 1 cut(s) | 1294 |
| Cfr10I | RCCGGY | 3 cut(s) | 110, 256, 998 |
| Cfr13I | GGNCC | 2 cut(s) | 142, 478 |
| Cfr42I | CCGCGG | 1 cut(s) | 385 |
| CseI | GACGC | 1 cut(s) | 237 |
| Csp6I | GTAC | 3 cut(s) | 105, 184, 872 |
| CviAII | CATG | 4 cut(s) | 199, 221, 784, 875 |
| CviQI | GTAC | 3 cut(s) | 105, 184, 872 |
| DdeI | CTNAG | 2 cut(s) | 1040, 1054 |
| DpnI | GATC | 7 cut(s) | 29, 57, 71, 407, 632, 798, 1278 |
| DpnII | GATC | 7 cut(s) | 27, 55, 69, 405, 630, 796, 1276 |
| DraIII | CACNNNGTG | 1 cut(s) | 1066 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 140 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 140 |
| EaeI | YGGCCR | 3 cut(s) | 78, 351, 379 |
| EagI | CGGCCG | 1 cut(s) | 78 |
| Eam1104I | CTCTTC | 2 cut(s) | 582, 601 |
| EarI | CTCTTC | 2 cut(s) | 582, 601 |
| EciI | GGCGGA | 2 cut(s) | 1139, 1304 |
| Ecl136II | GAGCTC | 1 cut(s) | 589 |
| EclXI | CGGCCG | 1 cut(s) | 78 |
| Eco130I | CCWWGG | 3 cut(s) | 372, 474, 699 |
| Eco147I | AGGCCT | 1 cut(s) | 698 |
| Eco24I | GRGCYC | 1 cut(s) | 591 |
| Eco47I | GGWCC | 2 cut(s) | 142, 478 |
| Eco52I | CGGCCG | 1 cut(s) | 78 |
| Eco53kI | GAGCTC | 1 cut(s) | 589 |
| Eco57I | CTGAAG | 2 cut(s) | 448, 633 |
| EcoICRI | GAGCTC | 1 cut(s) | 589 |
| EcoO109I | RGGNCCY | 1 cut(s) | 478 |
| EcoRI | GAATTC | 2 cut(s) | 497, 1148 |
| EcoRII | CCWGG | 1 cut(s) | 713 |
| EcoT14I | CCWWGG | 3 cut(s) | 372, 474, 699 |
| EcoT22I | ATGCAT | 1 cut(s) | 222 |
| EcoT38I | GRGCYC | 1 cut(s) | 591 |
| ErhI | CCWWGG | 3 cut(s) | 372, 474, 699 |
| Esp3I | CGTCTC | 2 cut(s) | 784, 1316 |
| FaeI | CATG | 4 cut(s) | 202, 224, 787, 878 |
| FaqI | GGGAC | 3 cut(s) | 73, 252, 532 |
| FatI | CATG | 4 cut(s) | 198, 220, 783, 874 |
| FauI | CCCGC | 3 cut(s) | 57, 380, 1293 |
| FauNDI | CATATG | 1 cut(s) | 7 |
| FbaI | TGATCA | 1 cut(s) | 27 |
| FblI | GTMKAC | 1 cut(s) | 1104 |
| Fnu4HI | GCNGC | 9 cut(s) | 81, 249, 382, 385, 802, 994, 1003, 1006, 1285 |
| FokI | GGATG | 2 cut(s) | 424, 1123 |
| FriOI | GRGCYC | 1 cut(s) | 591 |
| Fsp4HI | GCNGC | 9 cut(s) | 81, 249, 382, 385, 802, 994, 1003, 1006, 1285 |
| FspI | TGCGCA | 1 cut(s) | 1293 |
| GlaI | GCGC | 1 cut(s) | 1293 |
| GluI | GCNGC | 9 cut(s) | 81, 249, 382, 385, 802, 994, 1003, 1006, 1285 |
| GsaI | CCCAGC | 1 cut(s) | 173 |
| HaeIII | GGCC | 5 cut(s) | 80, 197, 353, 381, 698 |
| HapII | CCGG | 7 cut(s) | 67, 111, 257, 541, 927, 999, 1108 |
| HgaI | GACGC | 1 cut(s) | 237 |
| HhaI | GCGC | 1 cut(s) | 1294 |
| Hin1II | CATG | 4 cut(s) | 202, 224, 787, 878 |
| Hin6I | GCGC | 1 cut(s) | 1292 |
| HinP1I | GCGC | 1 cut(s) | 1292 |
| HindIII | AAGCTT | 1 cut(s) | 1114 |
| HinfI | GANTC | 7 cut(s) | 74, 262, 427, 651, 743, 1097, 1207 |
| HpaII | CCGG | 7 cut(s) | 67, 111, 257, 541, 927, 999, 1108 |
| HphI | GGTGA | 3 cut(s) | 125, 271, 1106 |
| Hpy166II | GTNNAC | 3 cut(s) | 145, 934, 1105 |
| Hpy188I | TCNGA | 7 cut(s) | 367, 405, 467, 571, 895, 905, 1050 |
| Hpy188III | TCNNGA | 7 cut(s) | 67, 409, 602, 611, 794, 1066, 1211 |
| Hpy8I | GTNNAC | 3 cut(s) | 145, 934, 1105 |
| Hpy99I | CGWCG | 4 cut(s) | 231, 728, 779, 946 |
| HpyAV | CCTTC | 1 cut(s) | 800 |
| HpyCH4III | ACNGT | 4 cut(s) | 142, 240, 301, 529 |
| HpyCH4IV | ACGT | 6 cut(s) | 128, 162, 332, 451, 941, 1173 |
| HpyCH4V | TGCA | 8 cut(s) | 220, 448, 804, 869, 889, 973, 1136, 1259 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 40, 49, 546, 875, 999, 1002, 1050, 1314 |
| HpyF3I | CTNAG | 2 cut(s) | 1040, 1054 |
| HpySE526I | ACGT | 6 cut(s) | 128, 162, 332, 451, 941, 1173 |
| Hsp92II | CATG | 4 cut(s) | 202, 224, 787, 878 |
| HspAI | GCGC | 1 cut(s) | 1292 |
| Kpn2I | TCCGGA | 1 cut(s) | 66 |
| Ksp22I | TGATCA | 1 cut(s) | 27 |
| KspI | CCGCGG | 1 cut(s) | 385 |
| Kzo9I | GATC | 7 cut(s) | 27, 55, 69, 405, 630, 796, 1276 |
| LguI | GCTCTTC | 1 cut(s) | 582 |
| LmnI | GCTCC | 4 cut(s) | 48, 768, 776, 817 |
| Lsp1109I | GCAGC | 5 cut(s) | 260, 788, 1005, 1014, 1017 |
| LweI | GCATC | 4 cut(s) | 43, 198, 207, 1145 |
| MaeII | ACGT | 6 cut(s) | 128, 162, 332, 451, 941, 1173 |
| MaeIII | GTNAC | 3 cut(s) | 259, 458, 529 |
| MalI | GATC | 7 cut(s) | 29, 57, 71, 407, 632, 798, 1278 |
| MboI | GATC | 7 cut(s) | 27, 55, 69, 405, 630, 796, 1276 |
| MboII | GAAGA | 3 cut(s) | 569, 588, 1249 |
| MflI | RGATCY | 2 cut(s) | 55, 630 |
| MhlI | GDGCHC | 7 cut(s) | 45, 495, 591, 765, 832, 885, 1062 |
| MlsI | TGGCCA | 1 cut(s) | 353 |
| MluCI | AATT | 9 cut(s) | 120, 360, 497, 805, 916, 1148, 1221, 1229, 1254 |
| MluNI | TGGCCA | 1 cut(s) | 353 |
| MlyI | GAGTC | 5 cut(s) | 68, 256, 660, 737, 1201 |
| MmeI | TCCRAC | 3 cut(s) | 111, 840, 1174 |
| Mox20I | TGGCCA | 1 cut(s) | 353 |
| Mph1103I | ATGCAT | 1 cut(s) | 222 |
| MroI | TCCGGA | 1 cut(s) | 66 |
| MroXI | GAANNNNTTC | 1 cut(s) | 576 |
| MscI | TGGCCA | 1 cut(s) | 353 |
| MseI | TTAA | 3 cut(s) | 119, 1085, 1245 |
| Msp20I | TGGCCA | 1 cut(s) | 353 |
| MspA1I | CMGCKG | 1 cut(s) | 384 |
| MspI | CCGG | 7 cut(s) | 67, 111, 257, 541, 927, 999, 1108 |
| MspR9I | CCNGG | 4 cut(s) | 542, 715, 927, 1109 |
| Mva1269I | GAATGC | 1 cut(s) | 871 |
| MvaI | CCWGG | 1 cut(s) | 715 |
| MvnI | CGCG | 3 cut(s) | 231, 384, 946 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 40, 49, 546, 875, 999, 1002, 1050, 1314 |
| NciI | CCSGG | 3 cut(s) | 542, 927, 1109 |
| NdeI | CATATG | 1 cut(s) | 7 |
| NdeII | GATC | 7 cut(s) | 27, 55, 69, 405, 630, 796, 1276 |
| NlaIII | CATG | 4 cut(s) | 202, 224, 787, 878 |
| NlaIV | GGNNCC | 4 cut(s) | 290, 772, 819, 924 |
| NmeAIII | GCCGAG | 2 cut(s) | 56, 747 |
| NmuCI | GTSAC | 1 cut(s) | 259 |
| NsbI | TGCGCA | 1 cut(s) | 1293 |
| NsiI | ATGCAT | 1 cut(s) | 222 |
| NspI | RCATGY | 1 cut(s) | 878 |
| PceI | AGGCCT | 1 cut(s) | 698 |
| PciSI | GCTCTTC | 1 cut(s) | 582 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 329, 507, 774 |
| PctI | GAATGC | 1 cut(s) | 871 |
| PdmI | GAANNNNTTC | 1 cut(s) | 576 |
| PfeI | GAWTC | 2 cut(s) | 427, 1097 |
| PkrI | GCNGC | 9 cut(s) | 82, 250, 383, 386, 803, 995, 1004, 1007, 1286 |
| PleI | GAGTC | 5 cut(s) | 68, 256, 659, 737, 1201 |
| PpsI | GAGTC | 5 cut(s) | 68, 256, 659, 737, 1201 |
| PpuMI | RGGWCCY | 1 cut(s) | 478 |
| Psp124BI | GAGCTC | 1 cut(s) | 591 |
| Psp5II | RGGWCCY | 1 cut(s) | 478 |
| Psp6I | CCWGG | 1 cut(s) | 713 |
| PspFI | CCCAGC | 1 cut(s) | 169 |
| PspGI | CCWGG | 1 cut(s) | 713 |
| PspN4I | GGNNCC | 4 cut(s) | 290, 772, 819, 924 |
| PspPI | GGNCC | 2 cut(s) | 142, 478 |
| PspPPI | RGGWCCY | 1 cut(s) | 478 |
| PsuI | RGATCY | 2 cut(s) | 55, 630 |
| RsaI | GTAC | 3 cut(s) | 106, 185, 873 |
| RsaNI | GTAC | 3 cut(s) | 105, 184, 872 |
| SacI | GAGCTC | 1 cut(s) | 591 |
| SacII | CCGCGG | 1 cut(s) | 385 |
| SapI | GCTCTTC | 1 cut(s) | 582 |
| SaqAI | TTAA | 3 cut(s) | 119, 1085, 1245 |
| SatI | GCNGC | 9 cut(s) | 81, 249, 382, 385, 802, 994, 1003, 1006, 1285 |
| Sau3AI | GATC | 7 cut(s) | 27, 55, 69, 405, 630, 796, 1276 |
| Sau96I | GGNCC | 2 cut(s) | 142, 478 |
| ScaI | AGTACT | 1 cut(s) | 106 |
| SchI | GAGTC | 5 cut(s) | 68, 256, 660, 737, 1201 |
| ScrFI | CCNGG | 4 cut(s) | 542, 715, 927, 1109 |
| SduI | GDGCHC | 7 cut(s) | 45, 495, 591, 765, 832, 885, 1062 |
| SfaNI | GCATC | 4 cut(s) | 43, 198, 207, 1145 |
| Sfr303I | CCGCGG | 1 cut(s) | 385 |
| SgrBI | CCGCGG | 1 cut(s) | 385 |
| SinI | GGWCC | 2 cut(s) | 142, 478 |
| SmlI | CTYRAG | 3 cut(s) | 600, 1202, 1209 |
| SmoI | CTYRAG | 3 cut(s) | 600, 1202, 1209 |
| Sse9I | AATT | 9 cut(s) | 120, 360, 497, 805, 916, 1148, 1221, 1229, 1254 |
| SseBI | AGGCCT | 1 cut(s) | 698 |
| SstI | GAGCTC | 1 cut(s) | 591 |
| StuI | AGGCCT | 1 cut(s) | 698 |
| StyD4I | CCNGG | 4 cut(s) | 540, 713, 925, 1107 |
| StyI | CCWWGG | 3 cut(s) | 372, 474, 699 |
| TaaI | ACNGT | 4 cut(s) | 142, 240, 301, 529 |
| TaiI | ACGT | 6 cut(s) | 131, 165, 335, 454, 944, 1176 |
| TaqI | TCGA | 5 cut(s) | 72, 177, 192, 495, 723 |
| TaqII | GACCGA | 1 cut(s) | 240 |
| TasI | AATT | 9 cut(s) | 120, 360, 497, 805, 916, 1148, 1221, 1229, 1254 |
| TatI | WGTACW | 3 cut(s) | 104, 183, 871 |
| TauI | GCSGC | 4 cut(s) | 83, 384, 387, 1287 |
| TfiI | GAWTC | 2 cut(s) | 427, 1097 |
| Tru1I | TTAA | 3 cut(s) | 119, 1085, 1245 |
| Tru9I | TTAA | 3 cut(s) | 119, 1085, 1245 |
| TscAI | CASTG | 1 cut(s) | 304 |
| TseFI | GTSAC | 1 cut(s) | 259 |
| TseI | GCWGC | 5 cut(s) | 248, 801, 993, 1002, 1005 |
| Tsp45I | GTSAC | 1 cut(s) | 259 |
| TspGWI | ACGGA | 2 cut(s) | 338, 763 |
| TspRI | CASTG | 1 cut(s) | 304 |
| VpaK11BI | GGWCC | 2 cut(s) | 142, 478 |
| XapI | RAATTY | 4 cut(s) | 497, 1148, 1221, 1229 |
| XceI | RCATGY | 1 cut(s) | 878 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 166 |
| XmiI | GTMKAC | 1 cut(s) | 1104 |
| XmnI | GAANNNNTTC | 1 cut(s) | 576 |
| ZrmI | AGTACT | 1 cut(s) | 106 |
| Zsp2I | ATGCAT | 1 cut(s) | 222 |