disease resistance protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0002589.1_g000044 Rmu_sc0003731.1_g000003 Rmu_sc0003731.1_g000012 |
| rosa_rugosa | Rorug02G0232800 Rorug02G0298300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 388 |
| AcsI | RAATTY | 2 cut(s) | 181, 239 |
| AfaI | GTAC | 2 cut(s) | 169, 175 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 14, 403 |
| AgsI | TTSAA | 4 cut(s) | 155, 186, 403, 412 |
| AhlI | ACTAGT | 2 cut(s) | 52, 170 |
| Alw26I | GTCTC | 3 cut(s) | 109, 115, 388 |
| AlwI | GGATC | 1 cut(s) | 388 |
| ApoI | RAATTY | 2 cut(s) | 181, 239 |
| AsuHPI | GGTGA | 1 cut(s) | 352 |
| BccI | CCATC | 2 cut(s) | 155, 367 |
| BcoDI | GTCTC | 3 cut(s) | 109, 115, 388 |
| BcuI | ACTAGT | 2 cut(s) | 52, 170 |
| BfaI | CTAG | 3 cut(s) | 53, 171, 387 |
| BglII | AGATCT | 1 cut(s) | 302 |
| BmcAI | AGTACT | 1 cut(s) | 169 |
| BmsI | GCATC | 1 cut(s) | 9 |
| BsaI | GGTCTC | 1 cut(s) | 109 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 398 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 14, 403 |
| BseGI | GGATG | 1 cut(s) | 24 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 14, 403 |
| BseMII | CTCAG | 1 cut(s) | 126 |
| BseRI | GAGGAG | 1 cut(s) | 371 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 14, 403 |
| BsmAI | GTCTC | 3 cut(s) | 109, 115, 388 |
| Bso31I | GGTCTC | 1 cut(s) | 109 |
| Bsp143I | GATC | 4 cut(s) | 3, 129, 302, 393 |
| BspCNI | CTCAG | 1 cut(s) | 125 |
| BspHI | TCATGA | 1 cut(s) | 369 |
| BspPI | GGATC | 1 cut(s) | 388 |
| BspTNI | GGTCTC | 1 cut(s) | 109 |
| BssMI | GATC | 4 cut(s) | 3, 129, 302, 393 |
| Bst6I | CTCTTC | 1 cut(s) | 207 |
| BstDEI | CTNAG | 3 cut(s) | 112, 278, 296 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 12 |
| BstF5I | GGATG | 1 cut(s) | 24 |
| BstKTI | GATC | 4 cut(s) | 6, 132, 305, 396 |
| BstMAI | GTCTC | 3 cut(s) | 109, 115, 388 |
| BstMBI | GATC | 4 cut(s) | 3, 129, 302, 393 |
| BstX2I | RGATCY | 1 cut(s) | 302 |
| BstYI | RGATCY | 1 cut(s) | 302 |
| BtsCI | GGATG | 1 cut(s) | 24 |
| CciI | TCATGA | 1 cut(s) | 369 |
| Csp6I | GTAC | 2 cut(s) | 168, 174 |
| CviAII | CATG | 2 cut(s) | 370, 391 |
| CviJI | RGCY | 2 cut(s) | 80, 146 |
| CviKI_1 | RGCY | 2 cut(s) | 80, 146 |
| CviQI | GTAC | 2 cut(s) | 168, 174 |
| DdeI | CTNAG | 3 cut(s) | 112, 278, 296 |
| DpnI | GATC | 4 cut(s) | 5, 131, 304, 395 |
| DpnII | GATC | 4 cut(s) | 3, 129, 302, 393 |
| Eam1104I | CTCTTC | 1 cut(s) | 207 |
| EarI | CTCTTC | 1 cut(s) | 207 |
| Eco31I | GGTCTC | 1 cut(s) | 109 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 12 |
| EcoT22I | ATGCAT | 1 cut(s) | 215 |
| FaeI | CATG | 2 cut(s) | 373, 394 |
| FaiI | YATR | 8 cut(s) | 11, 60, 100, 215, 323, 332, 371, 392 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 289, 321 |
| FatI | CATG | 2 cut(s) | 369, 390 |
| FokI | GGATG | 1 cut(s) | 31 |
| FspBI | CTAG | 3 cut(s) | 53, 171, 387 |
| Hin1II | CATG | 2 cut(s) | 373, 394 |
| HinfI | GANTC | 1 cut(s) | 268 |
| HphI | GGTGA | 1 cut(s) | 352 |
| Hpy188I | TCNGA | 1 cut(s) | 115 |
| Hpy188III | TCNNGA | 2 cut(s) | 122, 370 |
| HpyAV | CCTTC | 2 cut(s) | 149, 397 |
| HpyCH4V | TGCA | 2 cut(s) | 196, 213 |
| HpyF3I | CTNAG | 3 cut(s) | 112, 278, 296 |
| Hsp92II | CATG | 2 cut(s) | 373, 394 |
| Kzo9I | GATC | 4 cut(s) | 3, 129, 302, 393 |
| LmnI | GCTCC | 1 cut(s) | 377 |
| LweI | GCATC | 1 cut(s) | 9 |
| MaeI | CTAG | 3 cut(s) | 53, 171, 387 |
| MaeIII | GTNAC | 1 cut(s) | 340 |
| MalI | GATC | 4 cut(s) | 5, 131, 304, 395 |
| MboI | GATC | 4 cut(s) | 3, 129, 302, 393 |
| MboII | GAAGA | 1 cut(s) | 194 |
| MfeI | CAATTG | 1 cut(s) | 221 |
| MflI | RGATCY | 1 cut(s) | 302 |
| MluCI | AATT | 4 cut(s) | 27, 181, 221, 239 |
| MnlI | CCTC | 6 cut(s) | 17, 129, 223, 254, 349, 352 |
| Mph1103I | ATGCAT | 1 cut(s) | 215 |
| MseI | TTAA | 1 cut(s) | 312 |
| MunI | CAATTG | 1 cut(s) | 221 |
| NdeII | GATC | 4 cut(s) | 3, 129, 302, 393 |
| NlaIII | CATG | 2 cut(s) | 373, 394 |
| NmuCI | GTSAC | 1 cut(s) | 340 |
| NsiI | ATGCAT | 1 cut(s) | 215 |
| PagI | TCATGA | 1 cut(s) | 369 |
| PfeI | GAWTC | 1 cut(s) | 268 |
| PsuI | RGATCY | 1 cut(s) | 302 |
| RsaI | GTAC | 2 cut(s) | 169, 175 |
| RsaNI | GTAC | 2 cut(s) | 168, 174 |
| SaqAI | TTAA | 1 cut(s) | 312 |
| Sau3AI | GATC | 4 cut(s) | 3, 129, 302, 393 |
| ScaI | AGTACT | 1 cut(s) | 169 |
| SetI | ASST | 3 cut(s) | 75, 160, 363 |
| SfaNI | GCATC | 1 cut(s) | 9 |
| SpeI | ACTAGT | 2 cut(s) | 52, 170 |
| Sse9I | AATT | 4 cut(s) | 27, 181, 221, 239 |
| SspI | AATATT | 1 cut(s) | 336 |
| SspMI | CTAG | 3 cut(s) | 53, 171, 387 |
| TasI | AATT | 4 cut(s) | 27, 181, 221, 239 |
| TatI | WGTACW | 1 cut(s) | 167 |
| TfiI | GAWTC | 1 cut(s) | 268 |
| Tru1I | TTAA | 1 cut(s) | 312 |
| Tru9I | TTAA | 1 cut(s) | 312 |
| TseFI | GTSAC | 1 cut(s) | 340 |
| Tsp45I | GTSAC | 1 cut(s) | 340 |
| TspDTI | ATGAA | 1 cut(s) | 81 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 12 |
| XapI | RAATTY | 2 cut(s) | 181, 239 |
| XspI | CTAG | 3 cut(s) | 53, 171, 387 |
| ZrmI | AGTACT | 1 cut(s) | 169 |
| Zsp2I | ATGCAT | 1 cut(s) | 215 |