Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003832.1

Orthogroup ID

OG0015050

Physical Location & Seq

Genomic Coordinates Reverse (-)

43794 .. 54021

Gene Structure 10228 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2283 bp

atgtcgtcgtcgtcgtcttcttcggcaattcccgccctcaccttagtctctctctggctcctcctccccgtactttcccaagctgatgacacagtctgcatcgtcggcgccggcatcggcggcgcttccgtggcccacttcctccgcgaatactctccctccactctcaacctcacgatccgaatgttcgagcgaaacggcgtcgtcgggggacgcatggccactgtcaacgtctccggcgagttcttcgaggccggcgcctcgattctccaccccaagaacttccacgccgtcaactacaccaggctgctgaacctcacagtcaacagtccgtcggatgattccgagggttttggaatttgggatggggagaagttcatcttcaagactctgagcgtgaagtccaagcttccgtttgtgaacaggattgtttcgctggcgaattcgctgctgctgttcgtccggtacggctactcgctcgtcagaatggatagattcgtagagactactgtgaatagtttcttgaagtattatgagagcttaaagacgaggccggttttcgagtcggtggatgagatgcttaaatgggctggtttgcataatctcacggcgaggactttggctgaggagctggctgattctggcttgtgtccctttttgatacaagagcttgtcactgtcatcacaagaatcaattatggccaaaatgtcagtatgagtggacttggaggtgcggtatcattggcaggatctggtggaggattatggtctatcaaaggagggaactggcagatggcttctggattgatcaatcgttcagatgttgcattgcatcttcatgaagagatagaatctatttcttcaattggggactactacgaacttaactctaccatggggaatagttatacatgtgatgttgctgtagttgctacacctctagatgagttgaatgttgaatttactccttcagtttcaattcctaaaagagagttgcaacatacacatgcaactttggttagaggccttctaaatcctgtatattttggcgtgaattcagtgtcagaactcccaaaactggttgccacgcttgaggatcctgatcttccattcacaagcatctctgttctcaagcaacatgccgggaatgatatcacttacaagatattttctcgacaaccaatggcggaggcgcttctagatagtatcttcagtgcgaggacggagacaattcgaataaattgggctgcataccctcattatactgctcctgaagtatttgcaccctttatcttggatggccagcacttgtactatgtgaatgcttttgagaatgcagcaagcacaatggagacaagcgctgttgcggctgagaatgtagcaagactcatcttgtcaagatattttagtggtgtgcctgtgagtttggatatctcgagctctgacaggattacgaccagagataaagagagattgacccagattgcgattgattcagaaatggggaggcctgctttgctcgcatcggatttggtaatctcattcatgtgggtcttgtcaggagttttaatcaagaaatttattcacaatgtcttggggttggctcacgaacccagtggtgacatcctctacttcgccctctcaatcatcaacatgtttttctttgctttcttggctaagattaccaagggtggcacctacaatcctctcaccgttttctctgacgcaatcaccggcgatttcagccgattccttttcactgttgctgccagaatccctgctcaggttattggctctgttgctggggtcaagttcataatggagatctttcctggaataggtctcgggccacgtttgactgttgacatccatcgaggggcccttacagaaggattgctgacatttgcaatcgttactatctcacttggtctttacagaaaaatcccggggagctttttcatgaagacatggatctcaagtgtttccaagttaactcttcatattcttggctctgatctgactggtggttgcatgaacccagcttctgtgatgggatgggcttatgctcgtggagaccatataaccaaggaacatattcttgtgtattggcttgccccaatagaggcaactctactggcagtatggacatttagctcctctggtctggtgcaacattgcatcaatctcattcccggcgatcctccatttcaagcgtttggaaaaccggagagtgaccgcagcagctttatgagctaccttagaggccagccgagatcttattag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000096 GO:0000098 GO:0001101 GO:0001735 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006082 GO:0006508 GO:0006520 GO:0006575 GO:0006629 GO:0006644 GO:0006720 GO:0006721 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009063 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009987 GO:0010033 GO:0016020 GO:0016054 GO:0016491 GO:0016667 GO:0016670 GO:0019538 GO:0019637 GO:0019752 GO:0019941 GO:0023052 GO:0030163 GO:0030327 GO:0030328 GO:0030329 GO:0031090 GO:0032870 GO:0033993 GO:0042219 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044255 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044273 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045338 GO:0046395 GO:0050789 GO:0050794 GO:0050896 GO:0051603 GO:0051716 GO:0055114 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0097305 GO:0097306 GO:0098588 GO:0098805 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00900 ko01130 map00900 map01130

Pfam Domains

Protein Families

NAD_binding_8 Prenylcys_lyase

Protein Analysis

760

Amino Acids

83.1

Weight (kDa)

6.08

Isoelectric Point (pI)

34.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAD_binding_8	PF13450	34 - 94	1.2e-10	NAD(P)-binding Rossmann-like domain
Amino_oxidase	PF01593	62 - 330	1.9e-16	Flavin containing amine oxidoreductase
Prenylcys_lyase	PF07156	141 - 468	3.6e-103	Prenylcysteine lyase
MIP	PF00230	541 - 716	4.9e-06	Major intrinsic protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015050)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63910
fragaria_vesca	FvH4_1g24860 FvH4_1g24860
malus_domestica	MD15G1135000.v1.1
prunus_persica	Prupe.4G274700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0122521
rosa_laevigata	RLG00000018681
rosa_multiflora	Rmu_sc0003832.1_g000006 Rmu_sc0006704.1_g000006
rosa_roxburghii	Rroxscaffold_2G00121550
rosa_rugosa	Rorug02G0239200
rosa_samantha	Rh2AG297900 Rh2BG306600 Rh2CG284700 Rh2DG321500
rosa_wichuraiana	Rw2G023680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	107, 257, 1694
AccII	CGCG	1 cut(s)	147
AciI	CCGC	7 cut(s)	33, 120, 145, 734, 1187, 1367, 2236
AclWI	GGATC	6 cut(s)	172, 757, 1091, 1104, 1979, 2192
AcoI	YGGCCR	3 cut(s)	219, 700, 1300
AcsI	RAATTY	5 cut(s)	357, 442, 959, 1054, 1577
AcuI	CTGAAG	3 cut(s)	954, 1195, 1293
AcyI	GRCGYC	3 cut(s)	108, 201, 258
AfaI	GTAC	3 cut(s)	72, 467, 1313
AfeI	AGCGCT	1 cut(s)	1360
AfiI	CCNNNNNNNGG	5 cut(s)	1078, 1783, 1838, 1876, 2122
AflIII	ACRYGT	2 cut(s)	911, 1653
AgsI	TTSAA	7 cut(s)	385, 526, 864, 952, 959, 978, 2210
AjnI	CCWGG	2 cut(s)	302, 1831
Alw21I	GWGCWC	1 cut(s)	1442
Alw26I	GTCTC	7 cut(s)	52, 238, 497, 1220, 1346, 1847, 2067
AlwI	GGATC	6 cut(s)	172, 757, 1091, 1104, 1979, 2192
AlwNI	CAGNNNCTG	2 cut(s)	752, 2045
Ama87I	CYCGRG	3 cut(s)	1435, 1844, 1945
Aor51HI	AGCGCT	1 cut(s)	1360
ApaI	GGGCCC	1 cut(s)	1882
ApeKI	GCWGC	8 cut(s)	307, 448, 451, 1247, 1337, 1766, 2238, 2241
ApoI	RAATTY	5 cut(s)	357, 442, 959, 1054, 1577
Asp700I	GAANNNNTTC	2 cut(s)	518, 2094
AspLEI	GCGC	5 cut(s)	110, 125, 260, 1195, 1361
AspS9I	GGNCC	4 cut(s)	133, 1847, 1878, 1879
AsuC2I	CCSGG	4 cut(s)	1144, 1946, 1947, 2193
AsuHPI	GGTGA	4 cut(s)	31, 1631, 1702, 1723
AsuII	TTCGAA	1 cut(s)	1234
AvaI	CYCGRG	3 cut(s)	1435, 1844, 1945
BaeGI	GKGCMC	1 cut(s)	1882
BalI	TGGCCA	3 cut(s)	221, 702, 1302
BamHI	GGATCC	1 cut(s)	1096
BanI	GGYRCC	3 cut(s)	107, 257, 1694
BanII	GRGCYC	2 cut(s)	1442, 1882
BauI	CACGAG	1 cut(s)	2067
BbsI	GAAGAC	2 cut(s)	9, 1970
Bbv12I	GWGCWC	1 cut(s)	1442
BbvCI	CCTCAGC	1 cut(s)	624
BbvI	GCAGC	8 cut(s)	294, 435, 438, 1234, 1349, 1753, 2250, 2253
BccI	CCATC	6 cut(s)	359, 787, 1292, 1878, 2044, 2049
BceAI	ACGGC	4 cut(s)	214, 275, 484, 624
BcgI	CGANNNNNNTGC	2 cut(s)	430, 464
BciT130I	CCWGG	2 cut(s)	304, 1833
BclI	TGATCA	1 cut(s)	807
BcnI	CCSGG	4 cut(s)	1144, 1946, 1947, 2193
BcoDI	GTCTC	7 cut(s)	52, 238, 497, 1220, 1346, 1847, 2067
BfaI	CTAG	2 cut(s)	941, 1199
BfmI	CTRYAG	1 cut(s)	924
BfoI	RGCGCY	5 cut(s)	111, 126, 261, 1196, 1362
BglII	AGATCT	2 cut(s)	1824, 2273
Bme1390I	CCNGG	6 cut(s)	304, 1144, 1833, 1946, 1947, 2193
BmeT110I	CYCGRG	3 cut(s)	1435, 1844, 1945
BmgT120I	GGNCC	4 cut(s)	133, 1847, 1878, 1879
BmiI	GGNNCC	7 cut(s)	59, 109, 259, 1098, 1696, 1879, 1880
BmrFI	CCNGG	6 cut(s)	304, 1144, 1833, 1946, 1947, 2193
BmrI	ACTGGG	1 cut(s)	1608
BmsI	GCATC	7 cut(s)	108, 123, 567, 841, 1128, 1532, 2187
BmuI	ACTGGG	1 cut(s)	1608
BpiI	GAAGAC	2 cut(s)	9, 1970
Bpu10I	CCTNAGC	2 cut(s)	624, 1782
Bpu14I	TTCGAA	1 cut(s)	1234
BpuEI	CTTGAG	3 cut(s)	1112, 1115, 1960
BpuMI	CCSGG	4 cut(s)	1144, 1946, 1947, 2193
BsaBI	GATNNNNATC	1 cut(s)	1101
BsaHI	GRCGYC	3 cut(s)	108, 201, 258
BsaI	GGTCTC	2 cut(s)	1847, 2067
BsaJI	CCNNGG	7 cut(s)	129, 345, 894, 1686, 1945, 1946, 2085
BsaWI	WCCGGW	2 cut(s)	462, 2224
BsaXI	ACNNNNNCTCC	4 cut(s)	143, 173, 720, 750
Bsc4I	CCNNNNNNNGG	5 cut(s)	1078, 1783, 1838, 1876, 2122
Bse118I	RCCGGY	4 cut(s)	110, 254, 553, 1733
Bse1I	ACTGG	5 cut(s)	791, 1083, 1614, 2026, 2139
Bse3DI	GCAATG	2 cut(s)	827, 2173
Bse8I	GATNNNNATC	1 cut(s)	1101
BseBI	CCWGG	2 cut(s)	304, 1833
BseDI	CCNNGG	7 cut(s)	129, 345, 894, 1686, 1945, 1946, 2085
BseGI	GGATG	7 cut(s)	343, 370, 577, 1303, 1623, 1866, 2060
BseJI	GATNNNNATC	1 cut(s)	1101
BseLI	CCNNNNNNNGG	5 cut(s)	1078, 1783, 1838, 1876, 2122
BseMI	GCAATG	2 cut(s)	827, 2173
BseMII	CTCAG	4 cut(s)	383, 615, 1362, 1796
BseNI	ACTGG	5 cut(s)	791, 1083, 1614, 2026, 2139
BseRI	GAGGAG	4 cut(s)	50, 53, 641, 2146
BseSI	GKGCMC	1 cut(s)	1882
BseXI	GCAGC	8 cut(s)	294, 435, 438, 1234, 1349, 1753, 2250, 2253
BseYI	CCCAGC	2 cut(s)	1802, 2038
Bsh1236I	CGCG	1 cut(s)	147
BshNI	GGYRCC	3 cut(s)	107, 257, 1694
BsiHKAI	GWGCWC	1 cut(s)	1442
BsiHKCI	CYCGRG	3 cut(s)	1435, 1844, 1945
BslFI	GGGAC	3 cut(s)	225, 636, 884
BslI	CCNNNNNNNGG	5 cut(s)	1078, 1783, 1838, 1876, 2122
BsmAI	GTCTC	7 cut(s)	52, 238, 497, 1220, 1346, 1847, 2067
BsmBI	CGTCTC	1 cut(s)	238
BsmFI	GGGAC	3 cut(s)	225, 636, 884
BsmI	GAATGC	2 cut(s)	1327, 1339
Bso31I	GGTCTC	2 cut(s)	1847, 2067
BsoBI	CYCGRG	3 cut(s)	1435, 1844, 1945
Bsp119I	TTCGAA	1 cut(s)	1234
Bsp120I	GGGCCC	1 cut(s)	1878
Bsp1286I	GDGCHC	2 cut(s)	1442, 1882
Bsp19I	CCATGG	1 cut(s)	894
BspACI	CCGC	7 cut(s)	33, 120, 145, 734, 1187, 1367, 2236
BspCNI	CTCAG	4 cut(s)	384, 616, 1363, 1795
BspFNI	CGCG	1 cut(s)	147
BspHI	TCATGA	2 cut(s)	838, 1959
BspLI	GGNNCC	7 cut(s)	59, 109, 259, 1098, 1696, 1879, 1880
BspPI	GGATC	6 cut(s)	172, 757, 1091, 1104, 1979, 2192
BspT104I	TTCGAA	1 cut(s)	1234
BspT107I	GGYRCC	3 cut(s)	107, 257, 1694
BspTNI	GGTCTC	2 cut(s)	1847, 2067
BsrDI	GCAATG	2 cut(s)	827, 2173
BsrFI	RCCGGY	4 cut(s)	110, 254, 553, 1733
BsrI	ACTGG	5 cut(s)	791, 1083, 1614, 2026, 2139
BssAI	RCCGGY	4 cut(s)	110, 254, 553, 1733
BssECI	CCNNGG	7 cut(s)	129, 345, 894, 1686, 1945, 1946, 2085
BssNI	GRCGYC	3 cut(s)	108, 201, 258
BssSI	CACGAG	1 cut(s)	2067
BssT1I	CCWWGG	3 cut(s)	894, 1686, 2085
Bst2BI	CACGAG	1 cut(s)	2067
Bst2UI	CCWGG	2 cut(s)	304, 1833
Bst4CI	ACNGT	9 cut(s)	94, 226, 322, 329, 511, 679, 1714, 1762, 1861
Bst6I	CTCTTC	2 cut(s)	837, 2001
BstACI	GRCGYC	3 cut(s)	108, 201, 258
BstBI	TTCGAA	1 cut(s)	1234
BstDEI	CTNAG	7 cut(s)	43, 392, 624, 1371, 1677, 1782, 2258
BstDSI	CCRYGG	2 cut(s)	129, 894
BstENI	CCTNNNNNAGG	1 cut(s)	1836
BstF5I	GGATG	7 cut(s)	343, 370, 577, 1303, 1623, 1866, 2060
BstFNI	CGCG	1 cut(s)	147
BstH2I	RGCGCY	5 cut(s)	111, 126, 261, 1196, 1362
BstHHI	GCGC	5 cut(s)	110, 125, 260, 1195, 1361
BstMAI	GTCTC	7 cut(s)	52, 238, 497, 1220, 1346, 1847, 2067
BstNI	CCWGG	2 cut(s)	304, 1833
BstNSI	RCATGY	4 cut(s)	915, 1010, 1142, 1657
BstSCI	CCNGG	6 cut(s)	302, 1142, 1831, 1944, 1945, 2191
BstSFI	CTRYAG	1 cut(s)	924
BstSLI	GKGCMC	1 cut(s)	1882
BstUI	CGCG	1 cut(s)	147
BstV1I	GCAGC	8 cut(s)	294, 435, 438, 1234, 1349, 1753, 2250, 2253
BstV2I	GAAGAC	2 cut(s)	9, 1970
BstX2I	RGATCY	5 cut(s)	749, 1096, 1824, 1971, 2273
BstYI	RGATCY	5 cut(s)	749, 1096, 1824, 1971, 2273
BtgI	CCRYGG	2 cut(s)	129, 894
BtsCI	GGATG	7 cut(s)	343, 370, 577, 1303, 1623, 1866, 2060
BtsIMutI	CAGTG	6 cut(s)	222, 675, 1065, 1219, 1621, 1758
CaiI	CAGNNNCTG	2 cut(s)	752, 2045
CciI	TCATGA	2 cut(s)	838, 1959
CfoI	GCGC	5 cut(s)	110, 125, 260, 1195, 1361
Cfr10I	RCCGGY	4 cut(s)	110, 254, 553, 1733
Cfr13I	GGNCC	4 cut(s)	133, 1847, 1878, 1879
Cfr9I	CCCGGG	1 cut(s)	1945
CseI	GACGC	3 cut(s)	190, 222, 1733
Csp6I	GTAC	3 cut(s)	71, 466, 1312
CviQI	GTAC	3 cut(s)	71, 466, 1312
DdeI	CTNAG	7 cut(s)	43, 392, 624, 1371, 1677, 1782, 2258
DinI	GGCGCC	2 cut(s)	109, 259
EaeI	YGGCCR	3 cut(s)	219, 700, 1300
Eam1104I	CTCTTC	2 cut(s)	837, 2001
EarI	CTCTTC	2 cut(s)	837, 2001
EciI	GGCGGA	1 cut(s)	1202
Ecl136II	GAGCTC	1 cut(s)	1440
Eco130I	CCWWGG	3 cut(s)	894, 1686, 2085
Eco147I	AGGCCT	2 cut(s)	1026, 1510
Eco24I	GRGCYC	2 cut(s)	1442, 1882
Eco31I	GGTCTC	2 cut(s)	1847, 2067
Eco32I	GATATC	2 cut(s)	1153, 1432
Eco47III	AGCGCT	1 cut(s)	1360
Eco53kI	GAGCTC	1 cut(s)	1440
Eco57I	CTGAAG	3 cut(s)	954, 1195, 1293
Eco88I	CYCGRG	3 cut(s)	1435, 1844, 1945
EcoICRI	GAGCTC	1 cut(s)	1440
EcoNI	CCTNNNNNAGG	1 cut(s)	1836
EcoO109I	RGGNCCY	2 cut(s)	1878, 1879
EcoRI	GAATTC	2 cut(s)	442, 1054
EcoRII	CCWGG	2 cut(s)	302, 1831
EcoRV	GATATC	2 cut(s)	1153, 1432
EcoT14I	CCWWGG	3 cut(s)	894, 1686, 2085
EcoT38I	GRGCYC	2 cut(s)	1442, 1882
EgeI	GGCGCC	2 cut(s)	109, 259
EheI	GGCGCC	2 cut(s)	109, 259
ErhI	CCWWGG	3 cut(s)	894, 1686, 2085
Esp3I	CGTCTC	1 cut(s)	238
FalI	AAGNNNNNCTT	2 cut(s)	365, 397
FaqI	GGGAC	3 cut(s)	225, 636, 884
FauI	CCCGC	1 cut(s)	40
FbaI	TGATCA	1 cut(s)	807
FokI	GGATG	7 cut(s)	350, 377, 584, 1310, 1610, 1853, 2067
FriOI	GRGCYC	2 cut(s)	1442, 1882
FspBI	CTAG	2 cut(s)	941, 1199
GlaI	GCGC	5 cut(s)	109, 124, 259, 1194, 1360
GsaI	CCCAGC	2 cut(s)	1806, 2042
HaeII	RGCGCY	5 cut(s)	111, 126, 261, 1196, 1362
HgaI	GACGC	3 cut(s)	190, 222, 1733
HhaI	GCGC	5 cut(s)	110, 125, 260, 1195, 1361
Hin1I	GRCGYC	3 cut(s)	108, 201, 258
Hin6I	GCGC	5 cut(s)	108, 123, 258, 1193, 1359
HinP1I	GCGC	5 cut(s)	108, 123, 258, 1193, 1359
HincII	GTYRAC	5 cut(s)	229, 295, 325, 1864, 1992
HindII	GTYRAC	5 cut(s)	229, 295, 325, 1864, 1992
HindIII	AAGCTT	1 cut(s)	407
HpaI	GTTAAC	1 cut(s)	1992
HphI	GGTGA	4 cut(s)	31, 1631, 1702, 1723
Hpy166II	GTNNAC	7 cut(s)	229, 295, 325, 421, 722, 1864, 1992
Hpy8I	GTNNAC	7 cut(s)	229, 295, 325, 421, 722, 1864, 1992
Hpy99I	CGWCG	7 cut(s)	10, 13, 16, 107, 206, 209, 337
HpyAV	CCTTC	3 cut(s)	978, 1037, 1883
HpyCH4III	ACNGT	9 cut(s)	94, 226, 322, 329, 511, 679, 1714, 1762, 1861
HpyCH4IV	ACGT	2 cut(s)	231, 1852
HpyF3I	CTNAG	7 cut(s)	43, 392, 624, 1371, 1677, 1782, 2258
HpySE526I	ACGT	2 cut(s)	231, 1852
Hsp92I	GRCGYC	3 cut(s)	108, 201, 258
HspAI	GCGC	5 cut(s)	108, 123, 258, 1193, 1359
KasI	GGCGCC	2 cut(s)	107, 257
KroI	GCCGGC	2 cut(s)	110, 254
KroNI	GCCGGC	2 cut(s)	112, 256
Ksp22I	TGATCA	1 cut(s)	807
KspAI	GTTAAC	1 cut(s)	1992
LmnI	GCTCC	5 cut(s)	63, 628, 1273, 1950, 2159
Lsp1109I	GCAGC	8 cut(s)	294, 435, 438, 1234, 1349, 1753, 2250, 2253
LweI	GCATC	7 cut(s)	108, 123, 567, 841, 1128, 1532, 2187
MaeI	CTAG	2 cut(s)	941, 1199
MaeII	ACGT	2 cut(s)	231, 1852
MaeIII	GTNAC	4 cut(s)	673, 1619, 1912, 2231
MfeI	CAATTG	1 cut(s)	864
MflI	RGATCY	5 cut(s)	749, 1096, 1824, 1971, 2273
MhlI	GDGCHC	2 cut(s)	1442, 1882
MlsI	TGGCCA	3 cut(s)	221, 702, 1302
MluNI	TGGCCA	3 cut(s)	221, 702, 1302
Mly113I	GGCGCC	2 cut(s)	108, 258
MlyI	GAGTC	3 cut(s)	382, 572, 1380
MmeI	TCCRAC	1 cut(s)	315
Mox20I	TGGCCA	3 cut(s)	221, 702, 1302
MroNI	GCCGGC	2 cut(s)	110, 254
MroXI	GAANNNNTTC	2 cut(s)	518, 2094
MscI	TGGCCA	3 cut(s)	221, 702, 1302
MseI	TTAA	5 cut(s)	542, 582, 885, 1568, 1991
MslI	CAYNNNNRTG	4 cut(s)	837, 1005, 1546, 1652
Msp20I	TGGCCA	3 cut(s)	221, 702, 1302
MspR9I	CCNGG	6 cut(s)	304, 1144, 1833, 1946, 1947, 2193
MunI	CAATTG	1 cut(s)	864
Mva1269I	GAATGC	2 cut(s)	1327, 1339
MvaI	CCWGG	2 cut(s)	304, 1833
MvnI	CGCG	1 cut(s)	147
NaeI	GCCGGC	2 cut(s)	112, 256
NarI	GGCGCC	2 cut(s)	108, 258
NciI	CCSGG	4 cut(s)	1144, 1946, 1947, 2193
NcoI	CCATGG	1 cut(s)	894
NgoMIV	GCCGGC	2 cut(s)	110, 254
NlaIV	GGNNCC	7 cut(s)	59, 109, 259, 1098, 1696, 1879, 1880
NmuCI	GTSAC	3 cut(s)	673, 1619, 2231
NspI	RCATGY	4 cut(s)	915, 1010, 1142, 1657
NspV	TTCGAA	1 cut(s)	1234
PaeR7I	CTCGAG	1 cut(s)	1435
PagI	TCATGA	2 cut(s)	838, 1959
PceI	AGGCCT	2 cut(s)	1026, 1510
PciI	ACATGT	2 cut(s)	911, 1653
PcsI	WCGNNNNNNNCGW	2 cut(s)	11, 237
PctI	GAATGC	2 cut(s)	1327, 1339
PdiI	GCCGGC	2 cut(s)	112, 256
PdmI	GAANNNNTTC	2 cut(s)	518, 2094
PfeI	GAWTC	9 cut(s)	265, 341, 495, 638, 690, 851, 1493, 1749, 1773
PflFI	GACNNNGTC	1 cut(s)	92
PfoI	TCCNGGA	1 cut(s)	1831
PleI	GAGTC	3 cut(s)	382, 571, 1380
PluTI	GGCGCC	2 cut(s)	111, 261
PpsI	GAGTC	3 cut(s)	382, 571, 1380
PscI	ACATGT	2 cut(s)	911, 1653
Psp124BI	GAGCTC	1 cut(s)	1442
Psp6I	CCWGG	2 cut(s)	302, 1831
PspFI	CCCAGC	2 cut(s)	1802, 2038
PspGI	CCWGG	2 cut(s)	302, 1831
PspN4I	GGNNCC	7 cut(s)	59, 109, 259, 1098, 1696, 1879, 1880
PspOMI	GGGCCC	1 cut(s)	1878
PspPI	GGNCC	4 cut(s)	133, 1847, 1878, 1879
PstNI	CAGNNNCTG	2 cut(s)	752, 2045
PsuI	RGATCY	5 cut(s)	749, 1096, 1824, 1971, 2273
PsyI	GACNNNGTC	1 cut(s)	92
RsaI	GTAC	3 cut(s)	72, 467, 1313
RsaNI	GTAC	3 cut(s)	71, 466, 1312
RseI	CAYNNNNRTG	4 cut(s)	837, 1005, 1546, 1652
SacI	GAGCTC	1 cut(s)	1442
SaqAI	TTAA	5 cut(s)	542, 582, 885, 1568, 1991
Sau96I	GGNCC	4 cut(s)	133, 1847, 1878, 1879
SchI	GAGTC	3 cut(s)	382, 572, 1380
ScrFI	CCNGG	6 cut(s)	304, 1144, 1833, 1946, 1947, 2193
SduI	GDGCHC	2 cut(s)	1442, 1882
SfaNI	GCATC	7 cut(s)	108, 123, 567, 841, 1128, 1532, 2187
SfcI	CTRYAG	1 cut(s)	924
SfoI	GGCGCC	2 cut(s)	109, 259
Sfr274I	CTCGAG	1 cut(s)	1435
SfuI	TTCGAA	1 cut(s)	1234
SgrAI	CRCCGGYG	1 cut(s)	1733
SlaI	CTCGAG	1 cut(s)	1435
SmaI	CCCGGG	1 cut(s)	1947
SmiMI	CAYNNNNRTG	4 cut(s)	837, 1005, 1546, 1652
SmlI	CTYRAG	4 cut(s)	1091, 1130, 1435, 1975
SmoI	CTYRAG	4 cut(s)	1091, 1130, 1435, 1975
SseBI	AGGCCT	2 cut(s)	1026, 1510
SsiI	CCGC	7 cut(s)	33, 120, 145, 734, 1187, 1367, 2236
SspDI	GGCGCC	2 cut(s)	107, 257
SspMI	CTAG	2 cut(s)	941, 1199
SstI	GAGCTC	1 cut(s)	1442
StuI	AGGCCT	2 cut(s)	1026, 1510
StyD4I	CCNGG	6 cut(s)	302, 1142, 1831, 1944, 1945, 2191
StyI	CCWWGG	3 cut(s)	894, 1686, 2085
TaaI	ACNGT	9 cut(s)	94, 226, 322, 329, 511, 679, 1714, 1762, 1861
TaiI	ACGT	2 cut(s)	234, 1855
TaqI	TCGA	8 cut(s)	189, 249, 263, 561, 1174, 1234, 1436, 1873
TatI	WGTACW	1 cut(s)	1311
TauI	GCSGC	2 cut(s)	123, 1370
TfiI	GAWTC	9 cut(s)	265, 341, 495, 638, 690, 851, 1493, 1749, 1773
Tru1I	TTAA	5 cut(s)	542, 582, 885, 1568, 1991
Tru9I	TTAA	5 cut(s)	542, 582, 885, 1568, 1991
TscAI	CASTG	6 cut(s)	229, 682, 1065, 1219, 1621, 1765
TseFI	GTSAC	3 cut(s)	673, 1619, 2231
TseI	GCWGC	8 cut(s)	307, 448, 451, 1247, 1337, 1766, 2238, 2241
Tsp45I	GTSAC	3 cut(s)	673, 1619, 2231
TspDTI	ATGAA	9 cut(s)	367, 827, 855, 1534, 1804, 1948, 1976, 1988, 2048
TspGWI	ACGGA	4 cut(s)	118, 321, 402, 1238
TspMI	CCCGGG	1 cut(s)	1945
TspRI	CASTG	6 cut(s)	229, 682, 1065, 1219, 1621, 1765
Tth111I	GACNNNGTC	1 cut(s)	92
XagI	CCTNNNNNAGG	1 cut(s)	1836
XapI	RAATTY	5 cut(s)	357, 442, 959, 1054, 1577
XbaI	TCTAGA	2 cut(s)	940, 1198
XceI	RCATGY	4 cut(s)	915, 1010, 1142, 1657
XhoI	CTCGAG	1 cut(s)	1435
XmaI	CCCGGG	1 cut(s)	1945
XmnI	GAANNNNTTC	2 cut(s)	518, 2094
XspI	CTAG	2 cut(s)	941, 1199

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.