Rmu_sc0004291.1_g000009

Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004291.1
Physical Location & Seq
Forward (+)
56309 .. 58822
2514 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004291.1_g000009.1.cds

Sequence Viewer

Length: 1131 bp
atgaggttctcaggcccaaacaagttgcgcagtctactcaaaagagctcgaagcgccgccgcttcttttagctcttcttcttcttcttcaaaatctctcgccaccgcgccgcccaagttaccttactccatggacgaactccaagccctgaaaaccaaggtctgcatcatcggcagcgggccggcggcgcacacggcggcgatatacgccgcccgggccgagctgaggccgattctctttgagggatggatggccaatgatattgctcccggcggccagctcaccaccacctccgacgtcgagaacttcccggggtttccggaagggattctcggcatggagctcatggaccgctgccggagccagtcggtccggttcggtactcagatcttcaccgagactgtttccaaggtcgatttctcgacgacgccgtttaaggtctatactgatgcgaaaaccgttcaggccgacaccgtcatcgtctccaccggcgccgtcgcgaagcggctcgtgttccctggctccggcgagggcaagggaggcttctggaaccgagggatttcggcctgcgctgtctgcgacggagctgctccgattttcaggaacaaacccttggcggtgatcggaggaggtgactcggctatggaggaggccacgtttctcaccaagtacgggtctgaggttaacataatccacaggagggacacctttagggcttcgaagattatgcagaacagggctctcagtaaccctaagatcaaagtgctttggaattctgaggtggtggaggcttatggggaaggcgagaagggccctcttgcaggtttgaaggtcaagaatgttgtgaccggagaagtgtctgacttgaaggtttcggggctcttctttgcaattggtcacgagcctgcgactaagttcttggatgggcaattggagcttcatcctgatgggtatgttaagaccaagccaggcaccacggagactagcgttcgtggagtttttgctgccggggatgtgcaggataagaagtataggcaggctgttactgctgccgggactgggtgcatggcagctctggaagcagaacattacttgcaagagattggatcacaggaggggaagaccgattga

Protein Analysis

376

Amino Acids

40.09

Weight (kDa)

8.81

Isoelectric Point (pI)

36.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010901)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 300
Acc16I TGCGCA 1 cut(s) 29
Acc36I ACCTGC 1 cut(s) 812
AccB1I GGYRCC 2 cut(s) 491, 971
AccI GTMKAC 1 cut(s) 34
AccII CGCG 2 cut(s) 107, 500
AccIII TCCGGA 1 cut(s) 319
AclWI GGATC 1 cut(s) 1114
AcoI YGGCCR 2 cut(s) 252, 274
AcsI RAATTY 1 cut(s) 772
AcyI GRCGYC 3 cut(s) 297, 428, 492
AfaI GTAC 2 cut(s) 382, 671
AfiI CCNNNNNNNGG 6 cut(s) 225, 524, 672, 700, 821, 1059
AgsI TTSAA 3 cut(s) 90, 829, 868
AjnI CCWGG 2 cut(s) 517, 967
AjuI GAANNNNNNNTTGG 4 cut(s) 401, 433, 596, 628
AluBI AGCT 8 cut(s) 47, 72, 223, 280, 343, 587, 937, 1073
AluI AGCT 8 cut(s) 47, 72, 223, 280, 343, 587, 937, 1073
Alw21I GWGCWC 2 cut(s) 49, 345
Alw26I GTCTC 3 cut(s) 392, 487, 974
AlwI GGATC 1 cut(s) 1114
Ama87I CYCGRG 2 cut(s) 213, 310
Aor13HI TCCGGA 1 cut(s) 319
ApaI GGGCCC 1 cut(s) 815
ApeKI GCWGC 6 cut(s) 174, 354, 587, 1004, 1049, 1070
ApoI RAATTY 1 cut(s) 772
Asp700I GAANNNNTTC 1 cut(s) 327
AspLEI GCGC 6 cut(s) 30, 56, 109, 190, 494, 572
AspS9I GGNCC 7 cut(s) 14, 179, 216, 349, 370, 811, 812
AsuC2I CCSGG 7 cut(s) 214, 215, 270, 311, 312, 1009, 1054
AsuHPI GGTGA 5 cut(s) 274, 385, 631, 644, 655
AsuII TTCGAA 1 cut(s) 719
AvaI CYCGRG 2 cut(s) 213, 310
AvaII GGWCC 2 cut(s) 349, 370
BaeGI GKGCMC 1 cut(s) 815
BalI TGGCCA 1 cut(s) 254
BanI GGYRCC 2 cut(s) 491, 971
BanII GRGCYC 5 cut(s) 49, 345, 742, 815, 882
BauI CACGAG 2 cut(s) 509, 899
BbsI GAAGAC 1 cut(s) 1127
Bbv12I GWGCWC 2 cut(s) 49, 345
BbvCI CCTCAGC 1 cut(s) 224
BbvI GCAGC 6 cut(s) 186, 341, 574, 991, 1036, 1082
BccI CCATC 4 cut(s) 240, 244, 917, 941
BceAI ACGGC 3 cut(s) 210, 415, 479
BcgI CGANNNNNNTGC 4 cut(s) 569, 603, 709, 743
BciT130I CCWGG 2 cut(s) 519, 969
BcnI CCSGG 7 cut(s) 214, 215, 270, 311, 312, 1009, 1054
BcoDI GTCTC 3 cut(s) 392, 487, 974
BfaI CTAG 1 cut(s) 984
BfoI RGCGCY 2 cut(s) 57, 495
BfuAI ACCTGC 1 cut(s) 812
BglI GCCNNNNNGGC 1 cut(s) 215
BglII AGATCT 1 cut(s) 387
Bme1390I CCNGG 9 cut(s) 214, 215, 270, 311, 312, 519, 969, 1009, 1054
Bme18I GGWCC 2 cut(s) 349, 370
BmeT110I CYCGRG 2 cut(s) 213, 310
BmgT120I GGNCC 7 cut(s) 14, 179, 216, 349, 370, 811, 812
BmiI GGNNCC 6 cut(s) 362, 493, 523, 551, 813, 973
BmrFI CCNGG 9 cut(s) 214, 215, 270, 311, 312, 519, 969, 1009, 1054
BmrI ACTGGG 1 cut(s) 1068
BmsI GCATC 2 cut(s) 174, 439
BmuI ACTGGG 1 cut(s) 1068
BpiI GAAGAC 1 cut(s) 1127
Bpu10I CCTNAGC 1 cut(s) 224
Bpu14I TTCGAA 1 cut(s) 719
BpuMI CCSGG 7 cut(s) 214, 215, 270, 311, 312, 1009, 1054
BsaHI GRCGYC 3 cut(s) 297, 428, 492
BsaWI WCCGGW 3 cut(s) 319, 372, 848
BsaXI ACNNNNNCTCC 2 cut(s) 641, 671
Bsc4I CCNNNNNNNGG 6 cut(s) 225, 524, 672, 700, 821, 1059
Bse118I RCCGGY 2 cut(s) 181, 488
Bse1I ACTGG 2 cut(s) 364, 1063
BseAI TCCGGA 1 cut(s) 319
BseBI CCWGG 2 cut(s) 519, 969
BseGI GGATG 5 cut(s) 251, 255, 928, 940, 1018
BseLI CCNNNNNNNGG 6 cut(s) 225, 524, 672, 700, 821, 1059
BseMII CTCAG 6 cut(s) 24, 215, 398, 669, 757, 768
BseNI ACTGG 2 cut(s) 364, 1063
BseRI GAGGAG 2 cut(s) 642, 662
BseSI GKGCMC 1 cut(s) 815
BseXI GCAGC 6 cut(s) 186, 341, 574, 991, 1036, 1082
BsgI GTGCAG 1 cut(s) 1037
Bsh1236I CGCG 2 cut(s) 107, 500
BshNI GGYRCC 2 cut(s) 491, 971
BsiHKAI GWGCWC 2 cut(s) 49, 345
BsiHKCI CYCGRG 2 cut(s) 213, 310
BslFI GGGAC 2 cut(s) 716, 1069
BslI CCNNNNNNNGG 6 cut(s) 225, 524, 672, 700, 821, 1059
BsmAI GTCTC 3 cut(s) 392, 487, 974
BsmBI CGTCTC 1 cut(s) 487
BsmFI GGGAC 2 cut(s) 716, 1069
BsoBI CYCGRG 2 cut(s) 213, 310
Bsp119I TTCGAA 1 cut(s) 719
Bsp120I GGGCCC 1 cut(s) 811
Bsp1286I GDGCHC 5 cut(s) 49, 345, 742, 815, 882
Bsp13I TCCGGA 1 cut(s) 319
Bsp143I GATC 4 cut(s) 387, 621, 756, 1106
Bsp19I CCATGG 1 cut(s) 129
Bsp68I TCGCGA 1 cut(s) 500
BspCNI CTCAG 6 cut(s) 23, 216, 397, 670, 756, 769
BspEI TCCGGA 1 cut(s) 319
BspFNI CGCG 2 cut(s) 107, 500
BspLI GGNNCC 6 cut(s) 362, 493, 523, 551, 813, 973
BspMI ACCTGC 1 cut(s) 812
BspPI GGATC 1 cut(s) 1114
BspQI GCTCTTC 2 cut(s) 79, 887
BspT104I TTCGAA 1 cut(s) 719
BspT107I GGYRCC 2 cut(s) 491, 971
BsrFI RCCGGY 2 cut(s) 181, 488
BsrI ACTGG 2 cut(s) 364, 1063
BssAI RCCGGY 2 cut(s) 181, 488
BssMI GATC 4 cut(s) 387, 621, 756, 1106
BssNI GRCGYC 3 cut(s) 297, 428, 492
BssSI CACGAG 2 cut(s) 509, 899
BssT1I CCWWGG 4 cut(s) 129, 156, 408, 612
Bst2BI CACGAG 2 cut(s) 509, 899
Bst2UI CCWGG 2 cut(s) 519, 969
Bst4CI ACNGT 3 cut(s) 403, 460, 475
Bst6I CTCTTC 2 cut(s) 79, 887
BstACI GRCGYC 3 cut(s) 297, 428, 492
BstBI TTCGAA 1 cut(s) 719
BstC8I GCNNGC 6 cut(s) 179, 183, 278, 568, 906, 1038
BstDEI CTNAG 8 cut(s) 10, 224, 384, 678, 743, 753, 777, 912
BstDSI CCRYGG 2 cut(s) 129, 975
BstENI CCTNNNNNAGG 1 cut(s) 819
BstF5I GGATG 5 cut(s) 251, 255, 928, 940, 1018
BstFNI CGCG 2 cut(s) 107, 500
BstH2I RGCGCY 2 cut(s) 57, 495
BstHHI GCGC 6 cut(s) 30, 56, 109, 190, 494, 572
BstKTI GATC 4 cut(s) 390, 624, 759, 1109
BstMAI GTCTC 3 cut(s) 392, 487, 974
BstMBI GATC 4 cut(s) 387, 621, 756, 1106
BstNI CCWGG 2 cut(s) 519, 969
BstSCI CCNGG 9 cut(s) 212, 213, 268, 309, 310, 517, 967, 1007, 1052
BstSLI GKGCMC 1 cut(s) 815
BstUI CGCG 2 cut(s) 107, 500
BstV1I GCAGC 6 cut(s) 186, 341, 574, 991, 1036, 1082
BstV2I GAAGAC 1 cut(s) 1127
BstX2I RGATCY 1 cut(s) 387
BstYI RGATCY 1 cut(s) 387
BtgI CCRYGG 2 cut(s) 129, 975
BtsCI GGATG 5 cut(s) 251, 255, 928, 940, 1018
BtuMI TCGCGA 1 cut(s) 500
BveI ACCTGC 1 cut(s) 812
Cac8I GCNNGC 6 cut(s) 179, 183, 278, 568, 906, 1038
CfoI GCGC 6 cut(s) 30, 56, 109, 190, 494, 572
Cfr10I RCCGGY 2 cut(s) 181, 488
Cfr13I GGNCC 7 cut(s) 14, 179, 216, 349, 370, 811, 812
Cfr9I CCCGGG 2 cut(s) 213, 310
CpoI CGGWCCG 1 cut(s) 370
CseI GACGC 1 cut(s) 436
Csp6I GTAC 2 cut(s) 381, 670
CspI CGGWCCG 1 cut(s) 370
CviAII CATG 4 cut(s) 130, 337, 346, 1066
CviQI GTAC 2 cut(s) 381, 670
DdeI CTNAG 8 cut(s) 10, 224, 384, 678, 743, 753, 777, 912
DinI GGCGCC 1 cut(s) 493
DpnI GATC 4 cut(s) 389, 623, 758, 1108
DpnII GATC 4 cut(s) 387, 621, 756, 1106
EaeI YGGCCR 2 cut(s) 252, 274
Eam1104I CTCTTC 2 cut(s) 79, 887
EarI CTCTTC 2 cut(s) 79, 887
Ecl136II GAGCTC 2 cut(s) 47, 343
Eco130I CCWWGG 4 cut(s) 129, 156, 408, 612
Eco24I GRGCYC 5 cut(s) 49, 345, 742, 815, 882
Eco47I GGWCC 2 cut(s) 349, 370
Eco53kI GAGCTC 2 cut(s) 47, 343
Eco88I CYCGRG 2 cut(s) 213, 310
EcoICRI GAGCTC 2 cut(s) 47, 343
EcoNI CCTNNNNNAGG 1 cut(s) 819
EcoO109I RGGNCCY 2 cut(s) 811, 812
EcoRI GAATTC 1 cut(s) 772
EcoRII CCWGG 2 cut(s) 517, 967
EcoT14I CCWWGG 4 cut(s) 129, 156, 408, 612
EcoT38I GRGCYC 5 cut(s) 49, 345, 742, 815, 882
EgeI GGCGCC 1 cut(s) 493
EheI GGCGCC 1 cut(s) 493
ErhI CCWWGG 4 cut(s) 129, 156, 408, 612
Esp3I CGTCTC 1 cut(s) 487
FaeI CATG 4 cut(s) 133, 340, 349, 1069
FalI AAGNNNNNCTT 2 cut(s) 527, 559
FaqI GGGAC 2 cut(s) 716, 1069
FatI CATG 4 cut(s) 129, 336, 345, 1065
FauI CCCGC 1 cut(s) 170
FblI GTMKAC 1 cut(s) 34
FokI GGATG 5 cut(s) 258, 262, 927, 935, 1025
FriOI GRGCYC 5 cut(s) 49, 345, 742, 815, 882
FspBI CTAG 1 cut(s) 984
FspI TGCGCA 1 cut(s) 29
GlaI GCGC 6 cut(s) 29, 55, 108, 189, 493, 571
HaeII RGCGCY 2 cut(s) 57, 495
HgaI GACGC 1 cut(s) 436
HhaI GCGC 6 cut(s) 30, 56, 109, 190, 494, 572
Hin1I GRCGYC 3 cut(s) 297, 428, 492
Hin1II CATG 4 cut(s) 133, 340, 349, 1069
Hin6I GCGC 6 cut(s) 28, 54, 107, 188, 492, 570
HinP1I GCGC 6 cut(s) 28, 54, 107, 188, 492, 570
HincII GTYRAC 1 cut(s) 685
HindII GTYRAC 1 cut(s) 685
HinfI GANTC 3 cut(s) 232, 328, 635
HpaI GTTAAC 1 cut(s) 685
HphI GGTGA 5 cut(s) 274, 385, 631, 644, 655
Hpy166II GTNNAC 2 cut(s) 35, 685
Hpy188I TCNGA 7 cut(s) 295, 387, 594, 626, 679, 778, 862
Hpy8I GTNNAC 2 cut(s) 35, 685
Hpy99I CGWCG 6 cut(s) 299, 302, 427, 430, 500, 584
HpyAV CCTTC 5 cut(s) 317, 794, 802, 823, 862
HpyCH4III ACNGT 3 cut(s) 403, 460, 475
HpyCH4IV ACGT 2 cut(s) 297, 656
HpyCH4V TGCA 7 cut(s) 165, 730, 821, 890, 1018, 1065, 1096
HpyF3I CTNAG 8 cut(s) 10, 224, 384, 678, 743, 753, 777, 912
HpySE526I ACGT 2 cut(s) 297, 656
Hsp92I GRCGYC 3 cut(s) 297, 428, 492
Hsp92II CATG 4 cut(s) 133, 340, 349, 1069
HspAI GCGC 6 cut(s) 28, 54, 107, 188, 492, 570
KasI GGCGCC 1 cut(s) 491
Kpn2I TCCGGA 1 cut(s) 319
KroI GCCGGC 1 cut(s) 181
KroNI GCCGGC 1 cut(s) 183
KspAI GTTAAC 1 cut(s) 685
Kzo9I GATC 4 cut(s) 387, 621, 756, 1106
LguI GCTCTTC 2 cut(s) 79, 887
LmnI GCTCC 7 cut(s) 271, 340, 360, 527, 584, 595, 934
Lsp1109I GCAGC 6 cut(s) 186, 341, 574, 991, 1036, 1082
LweI GCATC 2 cut(s) 174, 439
MaeI CTAG 1 cut(s) 984
MaeII ACGT 2 cut(s) 297, 656
MaeIII GTNAC 6 cut(s) 117, 632, 746, 844, 896, 1042
MalI GATC 4 cut(s) 389, 623, 758, 1108
MboI GATC 4 cut(s) 387, 621, 756, 1106
MboII GAAGA 8 cut(s) 66, 69, 72, 75, 78, 382, 733, 874
MfeI CAATTG 2 cut(s) 891, 929
MflI RGATCY 1 cut(s) 387
MhlI GDGCHC 5 cut(s) 49, 345, 742, 815, 882
MlsI TGGCCA 1 cut(s) 254
MluCI AATT 3 cut(s) 772, 891, 929
MluNI TGGCCA 1 cut(s) 254
Mly113I GGCGCC 1 cut(s) 492
MlyI GAGTC 1 cut(s) 629
MmeI TCCRAC 1 cut(s) 318
Mox20I TGGCCA 1 cut(s) 254
MroI TCCGGA 1 cut(s) 319
MroNI GCCGGC 1 cut(s) 181
MroXI GAANNNNTTC 1 cut(s) 327
MscI TGGCCA 1 cut(s) 254
MseI TTAA 3 cut(s) 435, 684, 957
MslI CAYNNNNRTG 1 cut(s) 945
Msp20I TGGCCA 1 cut(s) 254
MspA1I CMGCKG 2 cut(s) 177, 354
MspR9I CCNGG 9 cut(s) 214, 215, 270, 311, 312, 519, 969, 1009, 1054
MunI CAATTG 2 cut(s) 891, 929
MvaI CCWGG 2 cut(s) 519, 969
MvnI CGCG 2 cut(s) 107, 500
NaeI GCCGGC 1 cut(s) 183
NarI GGCGCC 1 cut(s) 492
NciI CCSGG 7 cut(s) 214, 215, 270, 311, 312, 1009, 1054
NcoI CCATGG 1 cut(s) 129
NdeII GATC 4 cut(s) 387, 621, 756, 1106
NgoMIV GCCGGC 1 cut(s) 181
NlaIII CATG 4 cut(s) 133, 340, 349, 1069
NlaIV GGNNCC 6 cut(s) 362, 493, 523, 551, 813, 973
NmeAIII GCCGAG 3 cut(s) 244, 312, 617
NmuCI GTSAC 3 cut(s) 632, 844, 896
NruI TCGCGA 1 cut(s) 500
NsbI TGCGCA 1 cut(s) 29
NspV TTCGAA 1 cut(s) 719
PciSI GCTCTTC 2 cut(s) 79, 887
PcsI WCGNNNNNNNCGW 1 cut(s) 428
PdiI GCCGGC 1 cut(s) 183
PdmI GAANNNNTTC 1 cut(s) 327
PfeI GAWTC 2 cut(s) 232, 328
PflFI GACNNNGTC 1 cut(s) 473
PleI GAGTC 1 cut(s) 629
PluTI GGCGCC 1 cut(s) 495
PpsI GAGTC 1 cut(s) 629
Psp124BI GAGCTC 2 cut(s) 49, 345
Psp6I CCWGG 2 cut(s) 517, 967
PspGI CCWGG 2 cut(s) 517, 967
PspN4I GGNNCC 6 cut(s) 362, 493, 523, 551, 813, 973
PspOMI GGGCCC 1 cut(s) 811
PspPI GGNCC 7 cut(s) 14, 179, 216, 349, 370, 811, 812
PsuI RGATCY 1 cut(s) 387
PsyI GACNNNGTC 1 cut(s) 473
RruI TCGCGA 1 cut(s) 500
RsaI GTAC 2 cut(s) 382, 671
RsaNI GTAC 2 cut(s) 381, 670
RseI CAYNNNNRTG 1 cut(s) 945
Rsr2I CGGWCCG 1 cut(s) 370
RsrII CGGWCCG 1 cut(s) 370
SacI GAGCTC 2 cut(s) 49, 345
SapI GCTCTTC 2 cut(s) 79, 887
SaqAI TTAA 3 cut(s) 435, 684, 957
Sau3AI GATC 4 cut(s) 387, 621, 756, 1106
Sau96I GGNCC 7 cut(s) 14, 179, 216, 349, 370, 811, 812
SchI GAGTC 1 cut(s) 629
ScrFI CCNGG 9 cut(s) 214, 215, 270, 311, 312, 519, 969, 1009, 1054
SduI GDGCHC 5 cut(s) 49, 345, 742, 815, 882
SfaNI GCATC 2 cut(s) 174, 439
SfoI GGCGCC 1 cut(s) 493
SfuI TTCGAA 1 cut(s) 719
SgrAI CRCCGGYG 1 cut(s) 488
SinI GGWCC 2 cut(s) 349, 370
SmaI CCCGGG 2 cut(s) 215, 312
SmiMI CAYNNNNRTG 1 cut(s) 945
SrfI GCCCGGGC 1 cut(s) 215
Sse9I AATT 3 cut(s) 772, 891, 929
SspDI GGCGCC 1 cut(s) 491
SspMI CTAG 1 cut(s) 984
SstI GAGCTC 2 cut(s) 49, 345
StyD4I CCNGG 9 cut(s) 212, 213, 268, 309, 310, 517, 967, 1007, 1052
StyI CCWWGG 4 cut(s) 129, 156, 408, 612
TaaI ACNGT 3 cut(s) 403, 460, 475
TaiI ACGT 2 cut(s) 300, 659
TaqI TCGA 5 cut(s) 49, 300, 414, 422, 719
TaqII GACCGA 1 cut(s) 358
TasI AATT 3 cut(s) 772, 891, 929
TauI GCSGC 8 cut(s) 59, 62, 112, 188, 200, 212, 276, 508
TfiI GAWTC 2 cut(s) 232, 328
Tru1I TTAA 3 cut(s) 435, 684, 957
Tru9I TTAA 3 cut(s) 435, 684, 957
TseFI GTSAC 3 cut(s) 632, 844, 896
TseI GCWGC 6 cut(s) 174, 354, 587, 1004, 1049, 1070
Tsp45I GTSAC 3 cut(s) 632, 844, 896
TspDTI ATGAA 1 cut(s) 929
TspGWI ACGGA 2 cut(s) 597, 992
TspMI CCCGGG 2 cut(s) 213, 310
Tth111I GACNNNGTC 1 cut(s) 473
VpaK11BI GGWCC 2 cut(s) 349, 370
XagI CCTNNNNNAGG 1 cut(s) 819
XapI RAATTY 1 cut(s) 772
XmaI CCCGGG 2 cut(s) 213, 310
XmiI GTMKAC 1 cut(s) 34
XmnI GAANNNNTTC 1 cut(s) 327
XspI CTAG 1 cut(s) 984
ZraI GACGTC 1 cut(s) 298
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.