No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g10780 |
| malus_domestica | MD12G1178400.v1.1 |
| prunus_persica | Prupe.6G283600_v2.0.a1 |
| pyrus_communis | pycom12g16840 |
| rosa_chinensis | RchiOBHm_Chr3g0461821 |
| rosa_laevigata | RLG00000024895 |
| rosa_multiflora | Rmu_sc0004308.1_g000014 |
| rosa_roxburghii | Rroxscaffold_6G00417890 |
| rosa_rugosa | Rorug03G0053900 |
| rosa_samantha | Rh3AG112000 Rh3BG115300 Rh3DG117000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 205 |
| AfaI | GTAC | 3 cut(s) | 131, 220, 274 |
| AgsI | TTSAA | 3 cut(s) | 31, 143, 210 |
| AjnI | CCWGG | 1 cut(s) | 17 |
| AluBI | AGCT | 1 cut(s) | 73 |
| AluI | AGCT | 1 cut(s) | 73 |
| ApoI | RAATTY | 1 cut(s) | 205 |
| AspLEI | GCGC | 1 cut(s) | 84 |
| AsuHPI | GGTGA | 1 cut(s) | 133 |
| BbsI | GAAGAC | 1 cut(s) | 231 |
| BciT130I | CCWGG | 1 cut(s) | 19 |
| BclI | TGATCA | 1 cut(s) | 66 |
| BfaI | CTAG | 1 cut(s) | 270 |
| BmcAI | AGTACT | 1 cut(s) | 220 |
| Bme1390I | CCNGG | 1 cut(s) | 19 |
| BmrFI | CCNGG | 1 cut(s) | 19 |
| BpiI | GAAGAC | 1 cut(s) | 231 |
| BpuEI | CTTGAG | 1 cut(s) | 70 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 244, 274 |
| BseBI | CCWGG | 1 cut(s) | 19 |
| BseGI | GGATG | 2 cut(s) | 45, 265 |
| BseMII | CTCAG | 1 cut(s) | 215 |
| Bsp1407I | TGTACA | 1 cut(s) | 129 |
| Bsp143I | GATC | 1 cut(s) | 66 |
| BspCNI | CTCAG | 1 cut(s) | 214 |
| BsrGI | TGTACA | 1 cut(s) | 129 |
| BssMI | GATC | 1 cut(s) | 66 |
| Bst2UI | CCWGG | 1 cut(s) | 19 |
| Bst4CI | ACNGT | 1 cut(s) | 218 |
| Bst6I | CTCTTC | 1 cut(s) | 227 |
| BstAUI | TGTACA | 1 cut(s) | 129 |
| BstDEI | CTNAG | 1 cut(s) | 201 |
| BstF5I | GGATG | 2 cut(s) | 45, 265 |
| BstHHI | GCGC | 1 cut(s) | 84 |
| BstKTI | GATC | 1 cut(s) | 69 |
| BstMBI | GATC | 1 cut(s) | 66 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 79, 88 |
| BstNI | CCWGG | 1 cut(s) | 19 |
| BstSCI | CCNGG | 1 cut(s) | 17 |
| BstV2I | GAAGAC | 1 cut(s) | 231 |
| BtsCI | GGATG | 2 cut(s) | 45, 265 |
| CfoI | GCGC | 1 cut(s) | 84 |
| CsiI | ACCWGGT | 1 cut(s) | 17 |
| Csp6I | GTAC | 3 cut(s) | 130, 219, 273 |
| CviAII | CATG | 1 cut(s) | 276 |
| CviJI | RGCY | 2 cut(s) | 8, 73 |
| CviKI_1 | RGCY | 2 cut(s) | 8, 73 |
| CviQI | GTAC | 3 cut(s) | 130, 219, 273 |
| DdeI | CTNAG | 1 cut(s) | 201 |
| DpnI | GATC | 1 cut(s) | 68 |
| DpnII | GATC | 1 cut(s) | 66 |
| Eam1104I | CTCTTC | 1 cut(s) | 227 |
| EarI | CTCTTC | 1 cut(s) | 227 |
| EcoRI | GAATTC | 1 cut(s) | 205 |
| EcoRII | CCWGG | 1 cut(s) | 17 |
| FaeI | CATG | 1 cut(s) | 279 |
| FaiI | YATR | 3 cut(s) | 159, 167, 277 |
| FatI | CATG | 1 cut(s) | 275 |
| FbaI | TGATCA | 1 cut(s) | 66 |
| FokI | GGATG | 2 cut(s) | 32, 252 |
| FspBI | CTAG | 1 cut(s) | 270 |
| GlaI | GCGC | 1 cut(s) | 83 |
| HhaI | GCGC | 1 cut(s) | 84 |
| Hin1II | CATG | 1 cut(s) | 279 |
| Hin6I | GCGC | 1 cut(s) | 82 |
| HinP1I | GCGC | 1 cut(s) | 82 |
| HindIII | AAGCTT | 1 cut(s) | 71 |
| HinfI | GANTC | 1 cut(s) | 187 |
| HphI | GGTGA | 1 cut(s) | 133 |
| Hpy188I | TCNGA | 2 cut(s) | 66, 204 |
| HpyCH4III | ACNGT | 1 cut(s) | 218 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 79, 88 |
| HpyF3I | CTNAG | 1 cut(s) | 201 |
| Hsp92II | CATG | 1 cut(s) | 279 |
| HspAI | GCGC | 1 cut(s) | 82 |
| Ksp22I | TGATCA | 1 cut(s) | 66 |
| Kzo9I | GATC | 1 cut(s) | 66 |
| LpnPI | CCDG | 2 cut(s) | 4, 31 |
| MabI | ACCWGGT | 1 cut(s) | 17 |
| MaeI | CTAG | 1 cut(s) | 270 |
| MalI | GATC | 1 cut(s) | 68 |
| MboI | GATC | 1 cut(s) | 66 |
| MboII | GAAGA | 3 cut(s) | 231, 234, 244 |
| MluCI | AATT | 1 cut(s) | 205 |
| MnlI | CCTC | 4 cut(s) | 53, 210, 222, 228 |
| MspR9I | CCNGG | 1 cut(s) | 19 |
| MvaI | CCWGG | 1 cut(s) | 19 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 79, 88 |
| NdeII | GATC | 1 cut(s) | 66 |
| NlaIII | CATG | 1 cut(s) | 279 |
| PfeI | GAWTC | 1 cut(s) | 187 |
| Psp6I | CCWGG | 1 cut(s) | 17 |
| PspGI | CCWGG | 1 cut(s) | 17 |
| RsaI | GTAC | 3 cut(s) | 131, 220, 274 |
| RsaNI | GTAC | 3 cut(s) | 130, 219, 273 |
| Sau3AI | GATC | 1 cut(s) | 66 |
| ScaI | AGTACT | 1 cut(s) | 220 |
| ScrFI | CCNGG | 1 cut(s) | 19 |
| SetI | ASST | 3 cut(s) | 20, 75, 239 |
| SexAI | ACCWGGT | 1 cut(s) | 17 |
| SmlI | CTYRAG | 1 cut(s) | 85 |
| SmoI | CTYRAG | 1 cut(s) | 85 |
| Sse9I | AATT | 1 cut(s) | 205 |
| SspMI | CTAG | 1 cut(s) | 270 |
| StyD4I | CCNGG | 1 cut(s) | 17 |
| TaaI | ACNGT | 1 cut(s) | 218 |
| TasI | AATT | 1 cut(s) | 205 |
| TatI | WGTACW | 3 cut(s) | 129, 218, 272 |
| TfiI | GAWTC | 1 cut(s) | 187 |
| TspDTI | ATGAA | 2 cut(s) | 179, 254 |
| XapI | RAATTY | 1 cut(s) | 205 |
| XspI | CTAG | 1 cut(s) | 270 |
| ZrmI | AGTACT | 1 cut(s) | 220 |