Nitroreductase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G02020 AT1G02020 AT1G02020 |
| fragaria_vesca | FvH4_7g11430 FvH4_7g11430 |
| malus_domestica | MD07G1119000.v1.1 |
| prunus_persica | Prupe.2G142200_v2.0.a1 |
| pyrus_communis | pycom07g10560 |
| rosa_chinensis | RchiOBHm_Chr1g0349711 |
| rosa_laevigata | RLG00000028532 |
| rosa_multiflora | Rmu_sc0004624.1_g000015 Rmu_sc0033954.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00305360 |
| rosa_rugosa | Rorug01G0205500 |
| rosa_samantha | Rh1AG222800 Rh1BG188900 Rh1CG207500 Rh1DG218000 |
| rosa_wichuraiana | Rw1G019000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 268 |
| AccB1I | GGYRCC | 1 cut(s) | 1578 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 61, 829 |
| AccBSI | CCGCTC | 1 cut(s) | 802 |
| AclWI | GGATC | 3 cut(s) | 625, 1524, 1835 |
| AcoI | YGGCCR | 1 cut(s) | 1170 |
| AcsI | RAATTY | 3 cut(s) | 957, 998, 1885 |
| AcuI | CTGAAG | 1 cut(s) | 1461 |
| AdeI | CACNNNGTG | 1 cut(s) | 829 |
| AfaI | GTAC | 4 cut(s) | 290, 794, 1601, 1784 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 61, 64, 277, 349, 587, 607, 715, 829, 1690 |
| AgsI | TTSAA | 2 cut(s) | 1790, 1874 |
| AhlI | ACTAGT | 1 cut(s) | 1232 |
| AjiI | CACGTC | 1 cut(s) | 1043 |
| AjnI | CCWGG | 4 cut(s) | 60, 560, 713, 1843 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 296, 328, 1061, 1093 |
| AluBI | AGCT | 9 cut(s) | 527, 694, 785, 871, 925, 1077, 1405, 1531, 1642 |
| AluI | AGCT | 9 cut(s) | 527, 694, 785, 871, 925, 1077, 1405, 1531, 1642 |
| Alw21I | GWGCWC | 4 cut(s) | 684, 696, 1008, 1533 |
| Alw26I | GTCTC | 3 cut(s) | 570, 1334, 1751 |
| AlwI | GGATC | 3 cut(s) | 625, 1524, 1835 |
| Ama87I | CYCGRG | 2 cut(s) | 966, 989 |
| AoxI | GGCC | 6 cut(s) | 340, 351, 660, 699, 832, 1170 |
| ApaI | GGGCCC | 1 cut(s) | 703 |
| ApeKI | GCWGC | 4 cut(s) | 585, 1402, 1451, 1674 |
| ApoI | RAATTY | 3 cut(s) | 957, 998, 1885 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1590 |
| AspS9I | GGNCC | 7 cut(s) | 67, 280, 351, 661, 699, 700, 832 |
| AsuC2I | CCSGG | 3 cut(s) | 698, 1010, 1583 |
| AsuHPI | GGTGA | 5 cut(s) | 307, 451, 1483, 1516, 1576 |
| AsuII | TTCGAA | 2 cut(s) | 954, 1097 |
| AvaI | CYCGRG | 2 cut(s) | 966, 989 |
| AvaII | GGWCC | 2 cut(s) | 67, 280 |
| AxyI | CCTNAGG | 1 cut(s) | 1572 |
| BaeGI | GKGCMC | 2 cut(s) | 703, 1583 |
| BanI | GGYRCC | 1 cut(s) | 1578 |
| BanII | GRGCYC | 4 cut(s) | 696, 703, 1426, 1533 |
| BauI | CACGAG | 2 cut(s) | 336, 1645 |
| BbsI | GAAGAC | 3 cut(s) | 712, 1361, 1583 |
| Bbv12I | GWGCWC | 4 cut(s) | 684, 696, 1008, 1533 |
| BbvI | GCAGC | 4 cut(s) | 597, 1414, 1438, 1661 |
| BccI | CCATC | 6 cut(s) | 491, 890, 988, 1310, 1324, 1659 |
| BceAI | ACGGC | 3 cut(s) | 811, 1185, 1399 |
| BciT130I | CCWGG | 4 cut(s) | 62, 562, 715, 1845 |
| BciVI | GTATCC | 1 cut(s) | 1749 |
| BcnI | CCSGG | 3 cut(s) | 698, 1010, 1583 |
| BcoDI | GTCTC | 3 cut(s) | 570, 1334, 1751 |
| BcuI | ACTAGT | 1 cut(s) | 1232 |
| BfaI | CTAG | 3 cut(s) | 524, 1035, 1233 |
| BfmI | CTRYAG | 1 cut(s) | 1895 |
| BfuAI | ACCTGC | 1 cut(s) | 268 |
| BfuI | GTATCC | 1 cut(s) | 1749 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 339 |
| BisI | GCNGC | 8 cut(s) | 376, 586, 846, 861, 1400, 1403, 1452, 1675 |
| BlsI | GCNGC | 8 cut(s) | 377, 587, 847, 862, 1401, 1404, 1453, 1676 |
| Bme1390I | CCNGG | 7 cut(s) | 62, 562, 698, 715, 1010, 1583, 1845 |
| Bme18I | GGWCC | 2 cut(s) | 67, 280 |
| BmeT110I | CYCGRG | 2 cut(s) | 966, 989 |
| BmgBI | CACGTC | 1 cut(s) | 1043 |
| BmgT120I | GGNCC | 7 cut(s) | 67, 280, 351, 661, 699, 700, 832 |
| BmiI | GGNNCC | 2 cut(s) | 701, 1580 |
| BmrFI | CCNGG | 7 cut(s) | 62, 562, 698, 715, 1010, 1583, 1845 |
| BmrI | ACTGGG | 1 cut(s) | 358 |
| BmsI | GCATC | 3 cut(s) | 1210, 1426, 1865 |
| BmuI | ACTGGG | 1 cut(s) | 358 |
| BoxI | GACNNNNGTC | 1 cut(s) | 763 |
| BpiI | GAAGAC | 3 cut(s) | 712, 1361, 1583 |
| BpmI | CTGGAG | 2 cut(s) | 83, 1782 |
| Bpu14I | TTCGAA | 2 cut(s) | 954, 1097 |
| BpuEI | CTTGAG | 2 cut(s) | 956, 1517 |
| BpuMI | CCSGG | 3 cut(s) | 698, 1010, 1583 |
| BsaAI | YACGTR | 1 cut(s) | 288 |
| BsaI | GGTCTC | 1 cut(s) | 570 |
| BsaJI | CCNNGG | 4 cut(s) | 606, 714, 1173, 1684 |
| BsaWI | WCCGGW | 1 cut(s) | 810 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 419, 449, 1231, 1261, 1311, 1341, 1478, 1508 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 61, 64, 277, 349, 587, 607, 715, 829, 1690 |
| Bse118I | RCCGGY | 1 cut(s) | 548 |
| Bse1I | ACTGG | 3 cut(s) | 353, 1665, 1765 |
| Bse21I | CCTNAGG | 1 cut(s) | 1572 |
| Bse3DI | GCAATG | 1 cut(s) | 1409 |
| BseBI | CCWGG | 4 cut(s) | 62, 562, 715, 1845 |
| BseDI | CCNNGG | 4 cut(s) | 606, 714, 1173, 1684 |
| BseGI | GGATG | 6 cut(s) | 886, 1159, 1321, 1441, 1740, 1856 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 61, 64, 277, 349, 587, 607, 715, 829, 1690 |
| BseMI | GCAATG | 1 cut(s) | 1409 |
| BseMII | CTCAG | 2 cut(s) | 583, 1586 |
| BseNI | ACTGG | 3 cut(s) | 353, 1665, 1765 |
| BseRI | GAGGAG | 9 cut(s) | 41, 66, 143, 152, 386, 395, 439, 500, 1312 |
| BseSI | GKGCMC | 2 cut(s) | 703, 1583 |
| BseX3I | CGGCCG | 1 cut(s) | 1170 |
| BseXI | GCAGC | 4 cut(s) | 597, 1414, 1438, 1661 |
| BseYI | CCCAGC | 2 cut(s) | 581, 871 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1173 |
| BshFI | GGCC | 6 cut(s) | 342, 353, 662, 701, 834, 1172 |
| BshNI | GGYRCC | 1 cut(s) | 1578 |
| BsiEI | CGRYCG | 1 cut(s) | 1173 |
| BsiHKAI | GWGCWC | 4 cut(s) | 684, 696, 1008, 1533 |
| BsiHKCI | CYCGRG | 2 cut(s) | 966, 989 |
| BsiSI | CCGG | 8 cut(s) | 549, 651, 697, 811, 962, 1010, 1484, 1583 |
| BslFI | GGGAC | 1 cut(s) | 1491 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 61, 64, 277, 349, 587, 607, 715, 829, 1690 |
| BsmAI | GTCTC | 3 cut(s) | 570, 1334, 1751 |
| BsmBI | CGTCTC | 1 cut(s) | 1334 |
| BsmFI | GGGAC | 1 cut(s) | 1491 |
| BsnI | GGCC | 6 cut(s) | 342, 353, 662, 701, 834, 1172 |
| Bso31I | GGTCTC | 1 cut(s) | 570 |
| BsoBI | CYCGRG | 2 cut(s) | 966, 989 |
| Bsp119I | TTCGAA | 2 cut(s) | 954, 1097 |
| Bsp120I | GGGCCC | 1 cut(s) | 699 |
| Bsp1286I | GDGCHC | 7 cut(s) | 684, 696, 703, 1008, 1426, 1533, 1583 |
| Bsp143I | GATC | 3 cut(s) | 630, 1516, 1840 |
| BspANI | GGCC | 6 cut(s) | 342, 353, 662, 701, 834, 1172 |
| BspCNI | CTCAG | 2 cut(s) | 582, 1585 |
| BspLI | GGNNCC | 2 cut(s) | 701, 1580 |
| BspMI | ACCTGC | 1 cut(s) | 268 |
| BspPI | GGATC | 3 cut(s) | 625, 1524, 1835 |
| BspT104I | TTCGAA | 2 cut(s) | 954, 1097 |
| BspT107I | GGYRCC | 1 cut(s) | 1578 |
| BspTNI | GGTCTC | 1 cut(s) | 570 |
| BsrBI | CCGCTC | 1 cut(s) | 802 |
| BsrDI | GCAATG | 1 cut(s) | 1409 |
| BsrFI | RCCGGY | 1 cut(s) | 548 |
| BsrI | ACTGG | 3 cut(s) | 353, 1665, 1765 |
| BssAI | RCCGGY | 1 cut(s) | 548 |
| BssECI | CCNNGG | 4 cut(s) | 606, 714, 1173, 1684 |
| BssMI | GATC | 3 cut(s) | 630, 1516, 1840 |
| BssSI | CACGAG | 2 cut(s) | 336, 1645 |
| Bst2BI | CACGAG | 2 cut(s) | 336, 1645 |
| Bst2UI | CCWGG | 4 cut(s) | 62, 562, 715, 1845 |
| Bst4CI | ACNGT | 2 cut(s) | 1273, 1327 |
| Bst6I | CTCTTC | 3 cut(s) | 208, 214, 461 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1862 |
| BstBAI | YACGTR | 1 cut(s) | 288 |
| BstBI | TTCGAA | 2 cut(s) | 954, 1097 |
| BstC8I | GCNNGC | 5 cut(s) | 684, 800, 804, 1407, 1867 |
| BstDEI | CTNAG | 3 cut(s) | 569, 1130, 1572 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 62, 275 |
| BstF5I | GGATG | 6 cut(s) | 886, 1159, 1321, 1441, 1740, 1856 |
| BstKTI | GATC | 3 cut(s) | 633, 1519, 1843 |
| BstMAI | GTCTC | 3 cut(s) | 570, 1334, 1751 |
| BstMBI | GATC | 3 cut(s) | 630, 1516, 1840 |
| BstMCI | CGRYCG | 1 cut(s) | 1173 |
| BstNI | CCWGG | 4 cut(s) | 62, 562, 715, 1845 |
| BstNSI | RCATGY | 1 cut(s) | 1799 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 763 |
| BstSCI | CCNGG | 7 cut(s) | 60, 560, 696, 713, 1008, 1581, 1843 |
| BstSFI | CTRYAG | 1 cut(s) | 1895 |
| BstSLI | GKGCMC | 2 cut(s) | 703, 1583 |
| BstV1I | GCAGC | 4 cut(s) | 597, 1414, 1438, 1661 |
| BstV2I | GAAGAC | 3 cut(s) | 712, 1361, 1583 |
| BstZI | CGGCCG | 1 cut(s) | 1170 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1572 |
| BsuI | GTATCC | 1 cut(s) | 1749 |
| BsuRI | GGCC | 6 cut(s) | 342, 353, 662, 701, 834, 1172 |
| BtrI | CACGTC | 1 cut(s) | 1043 |
| BtsCI | GGATG | 6 cut(s) | 886, 1159, 1321, 1441, 1740, 1856 |
| BveI | ACCTGC | 1 cut(s) | 268 |
| Cac8I | GCNNGC | 5 cut(s) | 684, 800, 804, 1407, 1867 |
| Cfr10I | RCCGGY | 1 cut(s) | 548 |
| Cfr13I | GGNCC | 7 cut(s) | 67, 280, 351, 661, 699, 700, 832 |
| CsiI | ACCWGGT | 1 cut(s) | 560 |
| Csp6I | GTAC | 4 cut(s) | 289, 793, 1600, 1783 |
| CviAII | CATG | 6 cut(s) | 193, 836, 1448, 1670, 1690, 1796 |
| CviQI | GTAC | 4 cut(s) | 289, 793, 1600, 1783 |
| DdeI | CTNAG | 3 cut(s) | 569, 1130, 1572 |
| DpnI | GATC | 3 cut(s) | 632, 1518, 1842 |
| DpnII | GATC | 3 cut(s) | 630, 1516, 1840 |
| DraIII | CACNNNGTG | 1 cut(s) | 829 |
| EaeI | YGGCCR | 1 cut(s) | 1170 |
| EagI | CGGCCG | 1 cut(s) | 1170 |
| Eam1104I | CTCTTC | 3 cut(s) | 208, 214, 461 |
| EarI | CTCTTC | 3 cut(s) | 208, 214, 461 |
| EciI | GGCGGA | 2 cut(s) | 362, 376 |
| Ecl136II | GAGCTC | 2 cut(s) | 694, 1531 |
| EclXI | CGGCCG | 1 cut(s) | 1170 |
| Eco24I | GRGCYC | 4 cut(s) | 696, 703, 1426, 1533 |
| Eco31I | GGTCTC | 1 cut(s) | 570 |
| Eco47I | GGWCC | 2 cut(s) | 67, 280 |
| Eco52I | CGGCCG | 1 cut(s) | 1170 |
| Eco53kI | GAGCTC | 2 cut(s) | 694, 1531 |
| Eco57I | CTGAAG | 1 cut(s) | 1461 |
| Eco81I | CCTNAGG | 1 cut(s) | 1572 |
| Eco88I | CYCGRG | 2 cut(s) | 966, 989 |
| EcoICRI | GAGCTC | 2 cut(s) | 694, 1531 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 62, 275 |
| EcoO109I | RGGNCCY | 1 cut(s) | 280 |
| EcoRI | GAATTC | 2 cut(s) | 998, 1885 |
| EcoRII | CCWGG | 4 cut(s) | 60, 560, 713, 1843 |
| EcoT38I | GRGCYC | 4 cut(s) | 696, 703, 1426, 1533 |
| Esp3I | CGTCTC | 1 cut(s) | 1334 |
| FaeI | CATG | 6 cut(s) | 196, 839, 1451, 1673, 1693, 1799 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 296, 328, 1061, 1093 |
| FaqI | GGGAC | 1 cut(s) | 1491 |
| FatI | CATG | 6 cut(s) | 192, 835, 1447, 1669, 1689, 1795 |
| FauI | CCCGC | 4 cut(s) | 326, 633, 771, 795 |
| Fnu4HI | GCNGC | 8 cut(s) | 376, 586, 846, 861, 1400, 1403, 1452, 1675 |
| FokI | GGATG | 6 cut(s) | 893, 1166, 1328, 1448, 1747, 1843 |
| FriOI | GRGCYC | 4 cut(s) | 696, 703, 1426, 1533 |
| Fsp4HI | GCNGC | 8 cut(s) | 376, 586, 846, 861, 1400, 1403, 1452, 1675 |
| FspBI | CTAG | 3 cut(s) | 524, 1035, 1233 |
| GluI | GCNGC | 8 cut(s) | 376, 586, 846, 861, 1400, 1403, 1452, 1675 |
| GsaI | CCCAGC | 2 cut(s) | 585, 875 |
| GsuI | CTGGAG | 2 cut(s) | 83, 1782 |
| HaeIII | GGCC | 6 cut(s) | 342, 353, 662, 701, 834, 1172 |
| HapII | CCGG | 8 cut(s) | 549, 651, 697, 811, 962, 1010, 1484, 1583 |
| Hin1II | CATG | 6 cut(s) | 196, 839, 1451, 1673, 1693, 1799 |
| HindIII | AAGCTT | 2 cut(s) | 783, 923 |
| HinfI | GANTC | 4 cut(s) | 518, 573, 647, 1354 |
| HpaII | CCGG | 8 cut(s) | 549, 651, 697, 811, 962, 1010, 1484, 1583 |
| HphI | GGTGA | 5 cut(s) | 307, 451, 1483, 1516, 1576 |
| Hpy166II | GTNNAC | 1 cut(s) | 1040 |
| Hpy188I | TCNGA | 6 cut(s) | 572, 646, 758, 1090, 1230, 1353 |
| Hpy188III | TCNNGA | 4 cut(s) | 989, 1377, 1534, 1655 |
| Hpy8I | GTNNAC | 1 cut(s) | 1040 |
| Hpy99I | CGWCG | 2 cut(s) | 428, 769 |
| HpyCH4III | ACNGT | 2 cut(s) | 1273, 1327 |
| HpyCH4IV | ACGT | 3 cut(s) | 287, 1042, 1343 |
| HpyCH4V | TGCA | 6 cut(s) | 1363, 1609, 1717, 1799, 1814, 1856 |
| HpyF3I | CTNAG | 3 cut(s) | 569, 1130, 1572 |
| HpySE526I | ACGT | 3 cut(s) | 287, 1042, 1343 |
| Hsp92II | CATG | 6 cut(s) | 196, 839, 1451, 1673, 1693, 1799 |
| Kzo9I | GATC | 3 cut(s) | 630, 1516, 1840 |
| LmnI | GCTCC | 4 cut(s) | 676, 691, 699, 868 |
| Lsp1109I | GCAGC | 4 cut(s) | 597, 1414, 1438, 1661 |
| LweI | GCATC | 3 cut(s) | 1210, 1426, 1865 |
| MabI | ACCWGGT | 1 cut(s) | 560 |
| MaeI | CTAG | 3 cut(s) | 524, 1035, 1233 |
| MaeII | ACGT | 3 cut(s) | 287, 1042, 1343 |
| MaeIII | GTNAC | 2 cut(s) | 818, 1321 |
| MalI | GATC | 3 cut(s) | 632, 1518, 1842 |
| MbiI | CCGCTC | 1 cut(s) | 802 |
| MboI | GATC | 3 cut(s) | 630, 1516, 1840 |
| MboII | GAAGA | 9 cut(s) | 195, 201, 216, 448, 712, 898, 1195, 1361, 1583 |
| MfeI | CAATTG | 1 cut(s) | 1800 |
| MhlI | GDGCHC | 7 cut(s) | 684, 696, 703, 1008, 1426, 1533, 1583 |
| MluCI | AATT | 6 cut(s) | 957, 998, 1659, 1800, 1821, 1885 |
| MlyI | GAGTC | 2 cut(s) | 512, 582 |
| MmeI | TCCRAC | 3 cut(s) | 258, 736, 1083 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1590 |
| MseI | TTAA | 1 cut(s) | 1557 |
| MslI | CAYNNNNRTG | 2 cut(s) | 191, 1524 |
| MspA1I | CMGCKG | 2 cut(s) | 588, 1405 |
| MspI | CCGG | 8 cut(s) | 549, 651, 697, 811, 962, 1010, 1484, 1583 |
| MspR9I | CCNGG | 7 cut(s) | 62, 562, 698, 715, 1010, 1583, 1845 |
| MunI | CAATTG | 1 cut(s) | 1800 |
| MvaI | CCWGG | 4 cut(s) | 62, 562, 715, 1845 |
| NciI | CCSGG | 3 cut(s) | 698, 1010, 1583 |
| NdeII | GATC | 3 cut(s) | 630, 1516, 1840 |
| NlaIII | CATG | 6 cut(s) | 196, 839, 1451, 1673, 1693, 1799 |
| NlaIV | GGNNCC | 2 cut(s) | 701, 1580 |
| NmeAIII | GCCGAG | 2 cut(s) | 1198, 1665 |
| NspI | RCATGY | 1 cut(s) | 1799 |
| NspV | TTCGAA | 2 cut(s) | 954, 1097 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1094, 1220 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1590 |
| PfeI | GAWTC | 2 cut(s) | 647, 1354 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 61, 829 |
| PfoI | TCCNGGA | 1 cut(s) | 60 |
| PkrI | GCNGC | 8 cut(s) | 377, 587, 847, 862, 1401, 1404, 1453, 1676 |
| PleI | GAGTC | 2 cut(s) | 512, 581 |
| PpsI | GAGTC | 2 cut(s) | 512, 581 |
| Ppu21I | YACGTR | 1 cut(s) | 288 |
| PpuMI | RGGWCCY | 1 cut(s) | 280 |
| PshAI | GACNNNNGTC | 1 cut(s) | 763 |
| Psp124BI | GAGCTC | 2 cut(s) | 696, 1533 |
| Psp5II | RGGWCCY | 1 cut(s) | 280 |
| Psp6I | CCWGG | 4 cut(s) | 60, 560, 713, 1843 |
| PspFI | CCCAGC | 2 cut(s) | 581, 871 |
| PspGI | CCWGG | 4 cut(s) | 60, 560, 713, 1843 |
| PspN4I | GGNNCC | 2 cut(s) | 701, 1580 |
| PspOMI | GGGCCC | 1 cut(s) | 699 |
| PspPI | GGNCC | 7 cut(s) | 67, 280, 351, 661, 699, 700, 832 |
| PspPPI | RGGWCCY | 1 cut(s) | 280 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1237, 1269 |
| PvuII | CAGCTG | 1 cut(s) | 1405 |
| RsaI | GTAC | 4 cut(s) | 290, 794, 1601, 1784 |
| RsaNI | GTAC | 4 cut(s) | 289, 793, 1600, 1783 |
| RseI | CAYNNNNRTG | 2 cut(s) | 191, 1524 |
| SacI | GAGCTC | 2 cut(s) | 696, 1533 |
| SaqAI | TTAA | 1 cut(s) | 1557 |
| SatI | GCNGC | 8 cut(s) | 376, 586, 846, 861, 1400, 1403, 1452, 1675 |
| Sau3AI | GATC | 3 cut(s) | 630, 1516, 1840 |
| Sau96I | GGNCC | 7 cut(s) | 67, 280, 351, 661, 699, 700, 832 |
| SchI | GAGTC | 2 cut(s) | 512, 582 |
| ScrFI | CCNGG | 7 cut(s) | 62, 562, 698, 715, 1010, 1583, 1845 |
| SduI | GDGCHC | 7 cut(s) | 684, 696, 703, 1008, 1426, 1533, 1583 |
| SexAI | ACCWGGT | 1 cut(s) | 560 |
| SfaNI | GCATC | 3 cut(s) | 1210, 1426, 1865 |
| SfcI | CTRYAG | 1 cut(s) | 1895 |
| SfuI | TTCGAA | 2 cut(s) | 954, 1097 |
| SinI | GGWCC | 2 cut(s) | 67, 280 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 191, 1524 |
| SmlI | CTYRAG | 2 cut(s) | 935, 1532 |
| SmoI | CTYRAG | 2 cut(s) | 935, 1532 |
| SpeI | ACTAGT | 1 cut(s) | 1232 |
| Sse9I | AATT | 6 cut(s) | 957, 998, 1659, 1800, 1821, 1885 |
| SspMI | CTAG | 3 cut(s) | 524, 1035, 1233 |
| SstI | GAGCTC | 2 cut(s) | 696, 1533 |
| StyD4I | CCNGG | 7 cut(s) | 60, 560, 696, 713, 1008, 1581, 1843 |
| TaaI | ACNGT | 2 cut(s) | 1273, 1327 |
| TaiI | ACGT | 3 cut(s) | 290, 1045, 1346 |
| TaqI | TCGA | 7 cut(s) | 261, 345, 767, 954, 1002, 1097, 1744 |
| TaqII | GACCGA | 1 cut(s) | 1760 |
| TasI | AATT | 6 cut(s) | 957, 998, 1659, 1800, 1821, 1885 |
| TauI | GCSGC | 4 cut(s) | 378, 848, 863, 1402 |
| TfiI | GAWTC | 2 cut(s) | 647, 1354 |
| Tru1I | TTAA | 1 cut(s) | 1557 |
| Tru9I | TTAA | 1 cut(s) | 1557 |
| TseI | GCWGC | 4 cut(s) | 585, 1402, 1451, 1674 |
| TspDTI | ATGAA | 2 cut(s) | 1454, 1898 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 61, 829 |
| VpaK11BI | GGWCC | 2 cut(s) | 67, 280 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 62, 275 |
| XapI | RAATTY | 3 cut(s) | 957, 998, 1885 |
| XceI | RCATGY | 1 cut(s) | 1799 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1590 |
| XspI | CTAG | 3 cut(s) | 524, 1035, 1233 |