Rroxscaffold_4G00305360

Nitroreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0012061
Physical Location & Seq
Forward (+)
26018571 .. 26022041
3471 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00305360.1

Sequence Viewer

Length: 1782 bp
ATGTCCTTCTCTTCCTCTTCTCCTTCCCCTTCTTCACTCTCCAACCCCAAACAACCCGACCCACAACTCGACCAAAACCTCTCGCAGGTCCTCACGTACCACAACGACACCAAGCACCACTTCACCCGCTACGCTAGAGGCCCTCGCGGACTCGACTGGGCCAACCAGCCCAACCCATTCCGCCGCTACCTCTCCGCCCCTCTCCTCCCTCTCCTCCACCCCACACCACCCGACGACCACCCCTCCCCTCTCTACTCCTCCCTCTTCACCTCTCTCCCTCCTCCAAAACCCATCTCCAAATCCACCATTTCCCAACTCCTCTACGACTCTCTAGCTCTCTCCGCTTGGAAAACCACCGGCTTCTCCACCTGGTCCCTCAGAGTCAATCCCAGCAGCGGTAATCTACACCCCACCGAGGCTTATATAATCTCCCCGCCGATCCCTTCCCTCTCCGATTCCGGCTTCGTGGCCCATTACGCTCCCAAAGAGCACGCATTGGAGCTCCGGGCCCAAATCCCAACCTGGGTCTTCGCCGATTTGCTTCCCAAAGGCTCGTTTCTGGTCGGACTATCGTCGATTTTTTGGCGGGAAGCTTGGAAGTACGGCGAGCGGGCTTTCCGGTATTGTAACCACGATGTGGGCCATGCTATTGCGGCGGTTGCGGTGGCGGCGGCGGAGCTGGGTTGGGATGTGAAGATACTTGATGGGTTGGGGTATGAGGATTTGGAGAAGCTTATGGGGCTTGAGATGTTGCCACATTTCGAAATTCCGGCTCGGGCTGTGAAGGGGAGGCTTCCCGAGATGGAATTCGAGCACCCGGATTGTGTTCTGGTGGTTTTTCCTAGCGGAGGTGGTGGGTTTGAGGTTGATTATGAGAAGTTGAACTTGGCGATTTCGGAGTTTTCGAAGTTGGAGTGGAAGGGGAAGCCGAATGTGCTTAGTAAAGAGCATATATGTTGGGATGTGATATATAGAACGGCAGAGGCTGTGAAGAAAAAGAGGGATTTAGGAGGTAGGTTTTCGGTTGATGCGTTTCGGAGTAGTGGGAGTTGTAGTGAGGGTTCGTATAAGGGTTTTACGGTTAGGGAGGTTGTTAGGAAGCGGAGGAGTGCTGTGGATATGGATGGAGTTACTGTGATGGAGAGAGAGACGTTTTATCAGATTCTTTTGCATTGTCTTCCTTCGGGAAGTGGAGGGAAGCAGAAGCGGCAGCTGGCATTGCCGTTTCGGGCTCTTTCGTGGGATGCTGAGGTCCATGCTGCTTTGTTTGTTCATAGGGTGAAGGGACTGCCGGAGGGATTGTATTTTTTGGTGAGGAATGAGGATCATTTTGATGAGCTAAAGAAATCTATGAGGTCTGACTTTAAGTGGGTTAAACCTCAAGGGTGCCCAGAAGGTCTTCCCCTGTACGAACTGCATAGAACTGATTGTCGGGCTATTGCTGAAAAGCTCTCATGCCATCAGGAAATTGCCAGTCATGGCTGCTTTAGCCTTGGCATGGTGGCTTCTTTTGAGCCTCTATTGCAGGACAAAAATGTGTGGATGTATCCTCGATTATTTTGGGAGACTGGAGTTCTCGGTCAAGTGTTGTACCTTGAAGCACATGCAATTGGCATTTCTGCGACAGGAATTGGTTGCTATTTTGATGATCCTGTGCATGAATTGCTCGGGTTGAAAGGATCGAACTTCCAGAGTCTGTATCATTTCACAGTGGGAGGCCCAGTGATTGACAAGCGGATTATGAGCCTACCGGCATATCCTGGTCCTAGTGTTGATGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Nitroreductase

Protein Analysis

593

Amino Acids

66.26

Weight (kDa)

6.77

Isoelectric Point (pI)

41.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nitroreductase PF00881 95 - 249 2.2e-07 Nitroreductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012061)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02020 AT1G02020 AT1G02020
fragaria_vesca FvH4_7g11430 FvH4_7g11430
malus_domestica MD07G1119000.v1.1
prunus_persica Prupe.2G142200_v2.0.a1
pyrus_communis pycom07g10560
rosa_chinensis RchiOBHm_Chr1g0349711
rosa_laevigata RLG00000028532
rosa_multiflora Rmu_sc0004624.1_g000015 Rmu_sc0033954.1_g000001
rosa_roxburghii Rroxscaffold_4G00305360
rosa_rugosa Rorug01G0205500
rosa_samantha Rh1AG222800 Rh1BG188900 Rh1CG207500 Rh1DG218000
rosa_wichuraiana Rw1G019000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 76
AccB1I GGYRCC 1 cut(s) 1386
AccB7I CCANNNNNTGG 1 cut(s) 637
AccBSI CCGCTC 1 cut(s) 610
AccII CGCG 1 cut(s) 147
AclWI GGATC 4 cut(s) 433, 1332, 1643, 1687
AcsI RAATTY 2 cut(s) 765, 806
AdeI CACNNNGTG 1 cut(s) 637
AfaI GTAC 4 cut(s) 98, 602, 1409, 1592
AfiI CCNNNNNNNGG 7 cut(s) 85, 395, 415, 523, 637, 848, 1498
AgsI TTSAA 3 cut(s) 883, 1598, 1675
AjnI CCWGG 3 cut(s) 368, 521, 1759
AjuI GAANNNNNNNTTGG 4 cut(s) 104, 136, 869, 901
AluBI AGCT 8 cut(s) 335, 502, 593, 679, 733, 1213, 1339, 1450
AluI AGCT 8 cut(s) 335, 502, 593, 679, 733, 1213, 1339, 1450
Alw21I GWGCWC 3 cut(s) 492, 504, 816
Alw26I GTCTC 2 cut(s) 1142, 1559
AlwI GGATC 4 cut(s) 433, 1332, 1643, 1687
AlwNI CAGNNNCTG 2 cut(s) 986, 1696
Ama87I CYCGRG 3 cut(s) 774, 797, 1667
AoxI GGCC 6 cut(s) 139, 159, 468, 507, 640, 1717
ApaI GGGCCC 1 cut(s) 511
ApeKI GCWGC 4 cut(s) 393, 1210, 1259, 1482
ApoI RAATTY 2 cut(s) 765, 806
Asp700I GAANNNNTTC 1 cut(s) 1398
AsuC2I CCSGG 2 cut(s) 506, 818
AsuHPI GGTGA 4 cut(s) 115, 259, 1291, 1324
AsuII TTCGAA 2 cut(s) 762, 905
AvaI CYCGRG 3 cut(s) 774, 797, 1667
AvaII GGWCC 4 cut(s) 88, 372, 1252, 1763
BaeGI GKGCMC 2 cut(s) 511, 1391
BanI GGYRCC 1 cut(s) 1386
BanII GRGCYC 3 cut(s) 504, 511, 1234
BbsI GAAGAC 3 cut(s) 520, 1169, 1391
Bbv12I GWGCWC 3 cut(s) 492, 504, 816
BbvCI CCTCAGC 1 cut(s) 1248
BbvI GCAGC 4 cut(s) 405, 1222, 1246, 1469
BccI CCATC 6 cut(s) 299, 698, 796, 1118, 1132, 1467
BceAI ACGGC 3 cut(s) 619, 993, 1207
BciT130I CCWGG 3 cut(s) 370, 523, 1761
BciVI GTATCC 1 cut(s) 1557
BcnI CCSGG 2 cut(s) 506, 818
BcoDI GTCTC 2 cut(s) 1142, 1559
BfaI CTAG 4 cut(s) 135, 332, 843, 1767
BfuAI ACCTGC 1 cut(s) 76
BfuI GTATCC 1 cut(s) 1557
BisI GCNGC 9 cut(s) 184, 394, 654, 669, 672, 1208, 1211, 1260, 1483
BlsI GCNGC 9 cut(s) 185, 395, 655, 670, 673, 1209, 1212, 1261, 1484
Bme1390I CCNGG 5 cut(s) 370, 506, 523, 818, 1761
Bme18I GGWCC 4 cut(s) 88, 372, 1252, 1763
BmeT110I CYCGRG 3 cut(s) 774, 797, 1667
BmiI GGNNCC 3 cut(s) 374, 509, 1388
BmrFI CCNGG 5 cut(s) 370, 506, 523, 818, 1761
BmrI ACTGGG 2 cut(s) 166, 1715
BmsI GCATC 3 cut(s) 1018, 1234, 1765
BmuI ACTGGG 2 cut(s) 166, 1715
BoxI GACNNNNGTC 1 cut(s) 571
BpiI GAAGAC 3 cut(s) 520, 1169, 1391
BpmI CTGGAG 1 cut(s) 1590
Bpu10I CCTNAGC 1 cut(s) 1248
Bpu14I TTCGAA 2 cut(s) 762, 905
BpuEI CTTGAG 2 cut(s) 764, 1365
BpuMI CCSGG 2 cut(s) 506, 818
BsaAI YACGTR 1 cut(s) 96
BsaJI CCNNGG 3 cut(s) 414, 522, 1492
BsaWI WCCGGW 1 cut(s) 618
Bsc4I CCNNNNNNNGG 7 cut(s) 85, 395, 415, 523, 637, 848, 1498
Bse118I RCCGGY 2 cut(s) 356, 1750
Bse1I ACTGG 4 cut(s) 161, 1473, 1573, 1721
Bse3DI GCAATG 1 cut(s) 1217
BseBI CCWGG 3 cut(s) 370, 523, 1761
BseDI CCNNGG 3 cut(s) 414, 522, 1492
BseGI GGATG 5 cut(s) 694, 967, 1129, 1249, 1548
BseLI CCNNNNNNNGG 7 cut(s) 85, 395, 415, 523, 637, 848, 1498
BseMI GCAATG 1 cut(s) 1217
BseMII CTCAG 2 cut(s) 391, 1239
BseNI ACTGG 4 cut(s) 161, 1473, 1573, 1721
BseRI GAGGAG 6 cut(s) 194, 203, 247, 270, 308, 1120
BseSI GKGCMC 2 cut(s) 511, 1391
BseXI GCAGC 4 cut(s) 405, 1222, 1246, 1469
BseYI CCCAGC 2 cut(s) 389, 679
Bsh1236I CGCG 1 cut(s) 147
BshFI GGCC 6 cut(s) 141, 161, 470, 509, 642, 1719
BshNI GGYRCC 1 cut(s) 1386
BsiHKAI GWGCWC 3 cut(s) 492, 504, 816
BsiHKCI CYCGRG 3 cut(s) 774, 797, 1667
BsiSI CCGG 8 cut(s) 357, 459, 505, 619, 770, 818, 1292, 1751
BslFI GGGAC 2 cut(s) 358, 1299
BslI CCNNNNNNNGG 7 cut(s) 85, 395, 415, 523, 637, 848, 1498
BsmAI GTCTC 2 cut(s) 1142, 1559
BsmBI CGTCTC 1 cut(s) 1142
BsmFI GGGAC 2 cut(s) 358, 1299
BsnI GGCC 6 cut(s) 141, 161, 470, 509, 642, 1719
BsoBI CYCGRG 3 cut(s) 774, 797, 1667
Bsp119I TTCGAA 2 cut(s) 762, 905
Bsp120I GGGCCC 1 cut(s) 507
Bsp1286I GDGCHC 6 cut(s) 492, 504, 511, 816, 1234, 1391
Bsp143I GATC 4 cut(s) 438, 1324, 1648, 1679
BspANI GGCC 6 cut(s) 141, 161, 470, 509, 642, 1719
BspCNI CTCAG 2 cut(s) 390, 1240
BspFNI CGCG 1 cut(s) 147
BspLI GGNNCC 3 cut(s) 374, 509, 1388
BspMI ACCTGC 1 cut(s) 76
BspPI GGATC 4 cut(s) 433, 1332, 1643, 1687
BspT104I TTCGAA 2 cut(s) 762, 905
BspT107I GGYRCC 1 cut(s) 1386
BsrBI CCGCTC 1 cut(s) 610
BsrDI GCAATG 1 cut(s) 1217
BsrFI RCCGGY 2 cut(s) 356, 1750
BsrI ACTGG 4 cut(s) 161, 1473, 1573, 1721
BssAI RCCGGY 2 cut(s) 356, 1750
BssECI CCNNGG 3 cut(s) 414, 522, 1492
BssMI GATC 4 cut(s) 438, 1324, 1648, 1679
BssT1I CCWWGG 1 cut(s) 1492
Bst2UI CCWGG 3 cut(s) 370, 523, 1761
Bst4CI ACNGT 3 cut(s) 1081, 1135, 1711
Bst6I CTCTTC 3 cut(s) 16, 22, 269
BstAPI GCANNNNNTGC 1 cut(s) 1663
BstBAI YACGTR 1 cut(s) 96
BstBI TTCGAA 2 cut(s) 762, 905
BstC8I GCNNGC 4 cut(s) 492, 608, 612, 1215
BstDEI CTNAG 3 cut(s) 377, 938, 1248
BstENI CCTNNNNNAGG 2 cut(s) 83, 846
BstF5I GGATG 5 cut(s) 694, 967, 1129, 1249, 1548
BstFNI CGCG 1 cut(s) 147
BstKTI GATC 4 cut(s) 441, 1327, 1651, 1682
BstMAI GTCTC 2 cut(s) 1142, 1559
BstMBI GATC 4 cut(s) 438, 1324, 1648, 1679
BstNI CCWGG 3 cut(s) 370, 523, 1761
BstNSI RCATGY 1 cut(s) 1607
BstPAI GACNNNNGTC 1 cut(s) 571
BstSCI CCNGG 5 cut(s) 368, 504, 521, 816, 1759
BstSLI GKGCMC 2 cut(s) 511, 1391
BstUI CGCG 1 cut(s) 147
BstV1I GCAGC 4 cut(s) 405, 1222, 1246, 1469
BstV2I GAAGAC 3 cut(s) 520, 1169, 1391
BsuI GTATCC 1 cut(s) 1557
BsuRI GGCC 6 cut(s) 141, 161, 470, 509, 642, 1719
BtsCI GGATG 5 cut(s) 694, 967, 1129, 1249, 1548
BtsIMutI CAGTG 2 cut(s) 1716, 1728
BveI ACCTGC 1 cut(s) 76
Cac8I GCNNGC 4 cut(s) 492, 608, 612, 1215
CaiI CAGNNNCTG 2 cut(s) 986, 1696
Cfr10I RCCGGY 2 cut(s) 356, 1750
CsiI ACCWGGT 1 cut(s) 368
Csp6I GTAC 4 cut(s) 97, 601, 1408, 1591
CviAII CATG 7 cut(s) 644, 1256, 1455, 1478, 1498, 1604, 1658
CviQI GTAC 4 cut(s) 97, 601, 1408, 1591
DdeI CTNAG 3 cut(s) 377, 938, 1248
DpnI GATC 4 cut(s) 440, 1326, 1650, 1681
DpnII GATC 4 cut(s) 438, 1324, 1648, 1679
DraIII CACNNNGTG 1 cut(s) 637
Eam1104I CTCTTC 3 cut(s) 16, 22, 269
EarI CTCTTC 3 cut(s) 16, 22, 269
EciI GGCGGA 3 cut(s) 170, 184, 689
Ecl136II GAGCTC 1 cut(s) 502
Eco130I CCWWGG 1 cut(s) 1492
Eco24I GRGCYC 3 cut(s) 504, 511, 1234
Eco47I GGWCC 4 cut(s) 88, 372, 1252, 1763
Eco53kI GAGCTC 1 cut(s) 502
Eco88I CYCGRG 3 cut(s) 774, 797, 1667
EcoICRI GAGCTC 1 cut(s) 502
EcoNI CCTNNNNNAGG 2 cut(s) 83, 846
EcoO109I RGGNCCY 2 cut(s) 88, 140
EcoRI GAATTC 1 cut(s) 806
EcoRII CCWGG 3 cut(s) 368, 521, 1759
EcoT14I CCWWGG 1 cut(s) 1492
EcoT38I GRGCYC 3 cut(s) 504, 511, 1234
ErhI CCWWGG 1 cut(s) 1492
Esp3I CGTCTC 1 cut(s) 1142
FaeI CATG 7 cut(s) 647, 1259, 1458, 1481, 1501, 1607, 1661
FalI AAGNNNNNCTT 4 cut(s) 104, 136, 869, 901
FaqI GGGAC 2 cut(s) 358, 1299
FatI CATG 7 cut(s) 643, 1255, 1454, 1477, 1497, 1603, 1657
FauI CCCGC 4 cut(s) 134, 441, 579, 603
Fnu4HI GCNGC 9 cut(s) 184, 394, 654, 669, 672, 1208, 1211, 1260, 1483
FokI GGATG 5 cut(s) 701, 974, 1136, 1256, 1555
FriOI GRGCYC 3 cut(s) 504, 511, 1234
Fsp4HI GCNGC 9 cut(s) 184, 394, 654, 669, 672, 1208, 1211, 1260, 1483
FspBI CTAG 4 cut(s) 135, 332, 843, 1767
GluI GCNGC 9 cut(s) 184, 394, 654, 669, 672, 1208, 1211, 1260, 1483
GsaI CCCAGC 2 cut(s) 393, 683
GsuI CTGGAG 1 cut(s) 1590
HaeIII GGCC 6 cut(s) 141, 161, 470, 509, 642, 1719
HapII CCGG 8 cut(s) 357, 459, 505, 619, 770, 818, 1292, 1751
Hin1II CATG 7 cut(s) 647, 1259, 1458, 1481, 1501, 1607, 1661
HindIII AAGCTT 2 cut(s) 591, 731
HinfI GANTC 6 cut(s) 150, 326, 381, 455, 1162, 1693
HpaII CCGG 8 cut(s) 357, 459, 505, 619, 770, 818, 1292, 1751
HphI GGTGA 4 cut(s) 115, 259, 1291, 1324
Hpy188I TCNGA 7 cut(s) 380, 454, 566, 898, 1038, 1161, 1360
Hpy188III TCNNGA 4 cut(s) 797, 1185, 1463, 1690
Hpy99I CGWCG 2 cut(s) 236, 577
HpyAV CCTTC 9 cut(s) 16, 33, 39, 453, 778, 913, 1191, 1276, 1388
HpyCH4III ACNGT 3 cut(s) 1081, 1135, 1711
HpyCH4IV ACGT 2 cut(s) 95, 1151
HpyCH4V TGCA 5 cut(s) 1171, 1417, 1525, 1607, 1657
HpyF3I CTNAG 3 cut(s) 377, 938, 1248
HpySE526I ACGT 2 cut(s) 95, 1151
Hsp92II CATG 7 cut(s) 647, 1259, 1458, 1481, 1501, 1607, 1661
Kzo9I GATC 4 cut(s) 438, 1324, 1648, 1679
LmnI GCTCC 4 cut(s) 484, 499, 507, 676
Lsp1109I GCAGC 4 cut(s) 405, 1222, 1246, 1469
LweI GCATC 3 cut(s) 1018, 1234, 1765
MabI ACCWGGT 1 cut(s) 368
MaeI CTAG 4 cut(s) 135, 332, 843, 1767
MaeII ACGT 2 cut(s) 95, 1151
MaeIII GTNAC 2 cut(s) 626, 1129
MalI GATC 4 cut(s) 440, 1326, 1650, 1681
MbiI CCGCTC 1 cut(s) 610
MboI GATC 4 cut(s) 438, 1324, 1648, 1679
MboII GAAGA 9 cut(s) 3, 9, 24, 256, 520, 706, 1003, 1169, 1391
MfeI CAATTG 1 cut(s) 1608
MhlI GDGCHC 6 cut(s) 492, 504, 511, 816, 1234, 1391
MluCI AATT 6 cut(s) 765, 806, 1467, 1608, 1629, 1661
MlyI GAGTC 4 cut(s) 144, 320, 390, 1702
MmeI TCCRAC 3 cut(s) 66, 544, 891
MroXI GAANNNNTTC 1 cut(s) 1398
MseI TTAA 2 cut(s) 1365, 1374
MslI CAYNNNNRTG 1 cut(s) 1332
MspA1I CMGCKG 2 cut(s) 396, 1213
MspI CCGG 8 cut(s) 357, 459, 505, 619, 770, 818, 1292, 1751
MspR9I CCNGG 5 cut(s) 370, 506, 523, 818, 1761
MunI CAATTG 1 cut(s) 1608
MvaI CCWGG 3 cut(s) 370, 523, 1761
MvnI CGCG 1 cut(s) 147
NciI CCSGG 2 cut(s) 506, 818
NdeII GATC 4 cut(s) 438, 1324, 1648, 1679
NlaIII CATG 7 cut(s) 647, 1259, 1458, 1481, 1501, 1607, 1661
NlaIV GGNNCC 3 cut(s) 374, 509, 1388
NspI RCATGY 1 cut(s) 1607
NspV TTCGAA 2 cut(s) 762, 905
PcsI WCGNNNNNNNCGW 2 cut(s) 902, 1028
PdmI GAANNNNTTC 1 cut(s) 1398
PfeI GAWTC 2 cut(s) 455, 1162
PflMI CCANNNNNTGG 1 cut(s) 637
PkrI GCNGC 9 cut(s) 185, 395, 655, 670, 673, 1209, 1212, 1261, 1484
PleI GAGTC 4 cut(s) 144, 320, 389, 1701
PpsI GAGTC 4 cut(s) 144, 320, 389, 1701
Ppu21I YACGTR 1 cut(s) 96
PpuMI RGGWCCY 1 cut(s) 88
PshAI GACNNNNGTC 1 cut(s) 571
Psp124BI GAGCTC 1 cut(s) 504
Psp5II RGGWCCY 1 cut(s) 88
Psp6I CCWGG 3 cut(s) 368, 521, 1759
PspFI CCCAGC 2 cut(s) 389, 679
PspGI CCWGG 3 cut(s) 368, 521, 1759
PspN4I GGNNCC 3 cut(s) 374, 509, 1388
PspOMI GGGCCC 1 cut(s) 507
PspPPI RGGWCCY 1 cut(s) 88
PsrI GAACNNNNNNTAC 2 cut(s) 1045, 1077
PstNI CAGNNNCTG 2 cut(s) 986, 1696
PvuII CAGCTG 1 cut(s) 1213
RsaI GTAC 4 cut(s) 98, 602, 1409, 1592
RsaNI GTAC 4 cut(s) 97, 601, 1408, 1591
RseI CAYNNNNRTG 1 cut(s) 1332
SacI GAGCTC 1 cut(s) 504
SaqAI TTAA 2 cut(s) 1365, 1374
SatI GCNGC 9 cut(s) 184, 394, 654, 669, 672, 1208, 1211, 1260, 1483
Sau3AI GATC 4 cut(s) 438, 1324, 1648, 1679
SchI GAGTC 4 cut(s) 144, 320, 390, 1702
ScrFI CCNGG 5 cut(s) 370, 506, 523, 818, 1761
SduI GDGCHC 6 cut(s) 492, 504, 511, 816, 1234, 1391
SexAI ACCWGGT 1 cut(s) 368
SfaNI GCATC 3 cut(s) 1018, 1234, 1765
SfuI TTCGAA 2 cut(s) 762, 905
SinI GGWCC 4 cut(s) 88, 372, 1252, 1763
SmiMI CAYNNNNRTG 1 cut(s) 1332
SmlI CTYRAG 2 cut(s) 743, 1380
SmoI CTYRAG 2 cut(s) 743, 1380
Sse9I AATT 6 cut(s) 765, 806, 1467, 1608, 1629, 1661
SspMI CTAG 4 cut(s) 135, 332, 843, 1767
SstI GAGCTC 1 cut(s) 504
StyD4I CCNGG 5 cut(s) 368, 504, 521, 816, 1759
StyI CCWWGG 1 cut(s) 1492
TaaI ACNGT 3 cut(s) 1081, 1135, 1711
TaiI ACGT 2 cut(s) 98, 1154
TaqI TCGA 8 cut(s) 69, 153, 575, 762, 810, 905, 1552, 1682
TaqII GACCGA 1 cut(s) 1568
TasI AATT 6 cut(s) 765, 806, 1467, 1608, 1629, 1661
TauI GCSGC 5 cut(s) 186, 656, 671, 674, 1210
TfiI GAWTC 2 cut(s) 455, 1162
Tru1I TTAA 2 cut(s) 1365, 1374
Tru9I TTAA 2 cut(s) 1365, 1374
TscAI CASTG 2 cut(s) 1716, 1728
TseI GCWGC 4 cut(s) 393, 1210, 1259, 1482
TspDTI ATGAA 2 cut(s) 1262, 1674
TspRI CASTG 2 cut(s) 1716, 1728
Van91I CCANNNNNTGG 1 cut(s) 637
VpaK11BI GGWCC 4 cut(s) 88, 372, 1252, 1763
XagI CCTNNNNNAGG 2 cut(s) 83, 846
XapI RAATTY 2 cut(s) 765, 806
XceI RCATGY 1 cut(s) 1607
XmnI GAANNNNTTC 1 cut(s) 1398
XspI CTAG 4 cut(s) 135, 332, 843, 1767
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.