Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004644.1

Orthogroup ID

OG0011341

Physical Location & Seq

Genomic Coordinates Reverse (-)

73600 .. 77911

Gene Structure 4312 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004644.1_g000010.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1584 bp

atgccggtcgataccattttgaaagatgaagctagtgaggagaaaggagagcgtgcccgattggcttcatttgtgggtgcaatggcaattgctgacctcgtcaagacaaccttagggccaaagggaatggataaaatactgcaatcaacaggaagaggacatgaagttactgttaccaatgatggagccaccatcttaaagtcgctgcatattgacaatgcagctgctaaagtccttgttgatatttcaaaagttcaagatgatgaagttggtgatgggacaacttctgttgttgttctggcgggagaactcttaagggaggcagaaaagctggttgcagcgaagattcacccaatgacaattatatcaggttttcgaatggcagctgaatgtgctcgtgatgctttgttgaagaaggttgttgataataaggctgattctgagagatttaagtcagacttgatgaaaattgcaaagactactttgagctccaaaattctttcccaggataaggagcattttgcgcaactagcagtggatgctgtgatgcgactgcagggaagcaccaacttggagtctatccaaattataaagaaacctggtggatcactcaaggattcttttttggatgaaggatttattcttgacaagaaaataggtcttggtcagcccaaacgtatagagaatgccaagattttggttgcaaatacagcaatggacacagacaaagtgaagatttatggggctcgtgttcgtgttgattcaatgtctaaggttgctgaaattgaagtggccgaaaaagaaaaaatgagggaaaaggtgaagaagatcatcggtcatgggattaactgctttgttaacagacagctgatttacaatttccccgaagagctgtttgcagatgcaggaatacttgcaattgagcatgctgattttgatggcattgaacgtttggccttggtaactggtggtgaaattgcatcaacgtttgataatcccgagtcagttaagcttgggcactgcgatctcattgaggaaatcatgattggtgaggacaagttgatccacttttctggtgttgaactgggccaggcttgtacaatagtattgagaggcgcaagccatcatgtgctggatgaggctgaaaggtctctgcacgatgccttgtgtgttctgtctcagacagtcaatgacagcagggttttgcttggaggtggatggcctgagatgattatggctaaggaagttgatgtgctagccaagaagactcctggaaagaaatctcatgctattgaagccttcgcacgggcactcttgaccattccaactatcattgctgacaatgctggtttggacagtgctgagttggttgcacagctacgtgctgaacaccacaaggaaggatgcactgctgggattgacgtcatctctggaactgtgggagacatggcagaacgagggatatctgaagcgtttaaagttaagcaggctgtcttgctctctgcgacagaggccgcagagatgattcttagagttgatgagatcatcacatgtgcaccacgacagagagaaaatagaatgtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005832 GO:0005886 GO:0006457 GO:0006458 GO:0008150 GO:0009987 GO:0016020 GO:0030312 GO:0031224 GO:0031225 GO:0031226 GO:0032991 GO:0044183 GO:0044424 GO:0044425 GO:0044444 GO:0044445 GO:0044459 GO:0044464 GO:0046658 GO:0051082 GO:0061077 GO:0071944 GO:0101031

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cpn60_TCP1

Protein Analysis

527

Amino Acids

57.04

Weight (kDa)

5.59

Isoelectric Point (pI)

30.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011341)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G20890
fragaria_vesca	FvH4_2g37790 FvH4_2g37790 FvH4_2g37790
malus_domestica	MD08G1005100.v1.1 MD15G1004500.v1.1
prunus_persica	Prupe.1G357200_v2.0.a1
pyrus_communis	pycom08g00400 pycom15g00340
rosa_chinensis	RchiOBHm_Chr6g0303921
rosa_laevigata	RLG00000011034
rosa_multiflora	Rmu_sc0004644.1_g000010
rosa_roxburghii	Rroxscaffold_7G00164260
rosa_rugosa	Rorug06G0325900 Rorug06G0326000
rosa_samantha	Rh6AG440200 Rh6BG462800 Rh6CG452500 Rh6DG439500
rosa_wichuraiana	Rw6G038120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	590
AatII	GACGTC	1 cut(s)	1425
Acc16I	TGCGCA	1 cut(s)	525
AciI	CCGC	2 cut(s)	302, 1515
AclI	AACGTT	2 cut(s)	949, 986
AclWI	GGATC	2 cut(s)	613, 1057
AcoI	YGGCCR	1 cut(s)	792
AcsI	RAATTY	1 cut(s)	495
AcuI	CTGAAG	1 cut(s)	1488
AcyI	GRCGYC	1 cut(s)	1422
AfaI	GTAC	1 cut(s)	1099
AfiI	CCNNNNNNNGG	2 cut(s)	511, 1305
AflII	CTTAAG	1 cut(s)	313
AflIII	ACRYGT	1 cut(s)	1550
AgsI	TTSAA	9 cut(s)	22, 249, 257, 412, 765, 788, 947, 1082, 1295
AjnI	CCWGG	4 cut(s)	504, 598, 1089, 1270
AjuI	GAANNNNNNNTTGG	2 cut(s)	1029, 1061
AluBI	AGCT	9 cut(s)	32, 224, 331, 386, 489, 868, 892, 1012, 1378
AluI	AGCT	9 cut(s)	32, 224, 331, 386, 489, 868, 892, 1012, 1378
Alw21I	GWGCWC	3 cut(s)	397, 491, 1558
Alw26I	GTCTC	3 cut(s)	1155, 1182, 1437
Alw44I	GTGCAC	1 cut(s)	1554
AlwI	GGATC	2 cut(s)	613, 1057
Ama87I	CYCGRG	1 cut(s)	998
AoxI	GGCC	6 cut(s)	116, 792, 954, 1087, 1220, 1512
ApaLI	GTGCAC	1 cut(s)	1554
ApeKI	GCWGC	5 cut(s)	205, 221, 224, 338, 383
ApoI	RAATTY	1 cut(s)	495
AspLEI	GCGC	2 cut(s)	526, 1118
AspS9I	GGNCC	2 cut(s)	116, 1087
AsuHPI	GGTGA	5 cut(s)	284, 341, 832, 983, 1061
AsuII	TTCGAA	1 cut(s)	376
AsuNHI	GCTAGC	1 cut(s)	1255
AvaI	CYCGRG	1 cut(s)	998
AxyI	CCTNAGG	1 cut(s)	112
BaeGI	GKGCMC	4 cut(s)	58, 1020, 1312, 1558
BanII	GRGCYC	2 cut(s)	491, 748
BauI	CACGAG	2 cut(s)	396, 747
BbsI	GAAGAC	1 cut(s)	1271
Bbv12I	GWGCWC	3 cut(s)	397, 491, 1558
BbvI	GCAGC	5 cut(s)	192, 211, 233, 350, 395
BccI	CCATC	6 cut(s)	176, 200, 269, 932, 1131, 1212
BciT130I	CCWGG	4 cut(s)	506, 600, 1091, 1272
BcoDI	GTCTC	3 cut(s)	1155, 1182, 1437
BfaI	CTAG	3 cut(s)	33, 530, 1256
BfmI	CTRYAG	1 cut(s)	554
BfrI	CTTAAG	1 cut(s)	313
BglI	GCCNNNNNGGC	1 cut(s)	62
BisI	GCNGC	6 cut(s)	206, 222, 225, 339, 384, 1515
BlsI	GCNGC	6 cut(s)	207, 223, 226, 340, 385, 1516
Bme1390I	CCNGG	4 cut(s)	506, 600, 1091, 1272
BmeT110I	CYCGRG	1 cut(s)	998
BmgT120I	GGNCC	2 cut(s)	116, 1087
BmiI	GGNNCC	1 cut(s)	187
BmrFI	CCNGG	4 cut(s)	506, 600, 1091, 1272
BmrI	ACTGGG	1 cut(s)	1094
BmsI	GCATC	7 cut(s)	391, 529, 537, 892, 989, 1150, 1394
BmtI	GCTAGC	1 cut(s)	1259
BmuI	ACTGGG	1 cut(s)	1094
BpiI	GAAGAC	1 cut(s)	1271
Bpu10I	CCTNAGC	1 cut(s)	1239
Bpu14I	TTCGAA	1 cut(s)	376
BpuEI	CTTGAG	1 cut(s)	596
BsaAI	YACGTR	1 cut(s)	1382
BsaHI	GRCGYC	1 cut(s)	1422
BsaI	GGTCTC	1 cut(s)	1155
BsaJI	CCNNGG	2 cut(s)	504, 957
Bsc4I	CCNNNNNNNGG	2 cut(s)	511, 1305
Bse118I	RCCGGY	1 cut(s)	4
Bse1I	ACTGG	2 cut(s)	970, 1089
Bse21I	CCTNAGG	1 cut(s)	112
Bse3DI	GCAATG	3 cut(s)	87, 720, 1332
BseBI	CCWGG	4 cut(s)	506, 600, 1091, 1272
BseDI	CCNNGG	2 cut(s)	504, 957
BseGI	GGATG	5 cut(s)	544, 634, 1141, 1223, 1409
BseLI	CCNNNNNNNGG	2 cut(s)	511, 1305
BseMI	GCAATG	3 cut(s)	87, 720, 1332
BseMII	CTCAG	4 cut(s)	432, 1193, 1215, 1353
BseNI	ACTGG	2 cut(s)	970, 1089
BseRI	GAGGAG	1 cut(s)	53
BseSI	GKGCMC	4 cut(s)	58, 1020, 1312, 1558
BseXI	GCAGC	5 cut(s)	192, 211, 233, 350, 395
BseYI	CCCAGC	1 cut(s)	1412
BsgI	GTGCAG	1 cut(s)	1139
Bsh1285I	CGRYCG	1 cut(s)	9
BshFI	GGCC	6 cut(s)	118, 794, 956, 1089, 1222, 1514
BsiEI	CGRYCG	1 cut(s)	9
BsiHKAI	GWGCWC	3 cut(s)	397, 491, 1558
BsiHKCI	CYCGRG	1 cut(s)	998
BsiSI	CCGG	1 cut(s)	5
BslFI	GGGAC	1 cut(s)	292
BslI	CCNNNNNNNGG	2 cut(s)	511, 1305
BsmAI	GTCTC	3 cut(s)	1155, 1182, 1437
BsmFI	GGGAC	1 cut(s)	292
BsmI	GAATGC	1 cut(s)	691
BsnI	GGCC	6 cut(s)	118, 794, 956, 1089, 1222, 1514
Bso31I	GGTCTC	1 cut(s)	1155
BsoBI	CYCGRG	1 cut(s)	998
Bsp119I	TTCGAA	1 cut(s)	376
Bsp1286I	GDGCHC	7 cut(s)	58, 397, 491, 748, 1020, 1312, 1558
Bsp1407I	TGTACA	1 cut(s)	1097
Bsp143I	GATC	5 cut(s)	605, 828, 1024, 1062, 1542
BspACI	CCGC	2 cut(s)	302, 1515
BspANI	GGCC	6 cut(s)	118, 794, 956, 1089, 1222, 1514
BspCNI	CTCAG	4 cut(s)	433, 1192, 1216, 1354
BspHI	TCATGA	1 cut(s)	1041
BspLI	GGNNCC	1 cut(s)	187
BspMAI	CTGCAG	1 cut(s)	558
BspOI	GCTAGC	1 cut(s)	1259
BspPI	GGATC	2 cut(s)	613, 1057
BspQI	GCTCTTC	1 cut(s)	882
BspT104I	TTCGAA	1 cut(s)	376
BspTI	CTTAAG	1 cut(s)	313
BspTNI	GGTCTC	1 cut(s)	1155
BsrDI	GCAATG	3 cut(s)	87, 720, 1332
BsrFI	RCCGGY	1 cut(s)	4
BsrGI	TGTACA	1 cut(s)	1097
BsrI	ACTGG	2 cut(s)	970, 1089
BssAI	RCCGGY	1 cut(s)	4
BssECI	CCNNGG	2 cut(s)	504, 957
BssMI	GATC	5 cut(s)	605, 828, 1024, 1062, 1542
BssNI	GRCGYC	1 cut(s)	1422
BssSI	CACGAG	2 cut(s)	396, 747
BssT1I	CCWWGG	1 cut(s)	957
Bst2BI	CACGAG	2 cut(s)	396, 747
Bst2UI	CCWGG	4 cut(s)	506, 600, 1091, 1272
Bst4CI	ACNGT	4 cut(s)	172, 1186, 1358, 1438
Bst6I	CTCTTC	2 cut(s)	148, 882
BstACI	GRCGYC	1 cut(s)	1422
BstAFI	CTTAAG	1 cut(s)	313
BstAPI	GCANNNNNTGC	1 cut(s)	539
BstAUI	TGTACA	1 cut(s)	1097
BstBAI	YACGTR	1 cut(s)	1382
BstBI	TTCGAA	1 cut(s)	376
BstC8I	GCNNGC	5 cut(s)	54, 927, 1120, 1257, 1488
BstDEI	CTNAG	8 cut(s)	112, 441, 771, 1179, 1224, 1239, 1362, 1529
BstF5I	GGATG	5 cut(s)	544, 634, 1141, 1223, 1409
BstHHI	GCGC	2 cut(s)	526, 1118
BstKTI	GATC	5 cut(s)	608, 831, 1027, 1065, 1545
BstMAI	GTCTC	3 cut(s)	1155, 1182, 1437
BstMBI	GATC	5 cut(s)	605, 828, 1024, 1062, 1542
BstMCI	CGRYCG	1 cut(s)	9
BstNI	CCWGG	4 cut(s)	506, 600, 1091, 1272
BstNSI	RCATGY	2 cut(s)	929, 1554
BstSCI	CCNGG	4 cut(s)	504, 598, 1089, 1270
BstSFI	CTRYAG	1 cut(s)	554
BstSLI	GKGCMC	4 cut(s)	58, 1020, 1312, 1558
BstV1I	GCAGC	5 cut(s)	192, 211, 233, 350, 395
BstV2I	GAAGAC	1 cut(s)	1271
BstXI	CCANNNNNNTGG	2 cut(s)	697, 1073
Bsu36I	CCTNAGG	1 cut(s)	112
BsuRI	GGCC	6 cut(s)	118, 794, 956, 1089, 1222, 1514
BtsCI	GGATG	5 cut(s)	544, 634, 1141, 1223, 1409
BtsI	GCAGTG	3 cut(s)	540, 1018, 1407
BtsIMutI	CAGTG	4 cut(s)	540, 1018, 1363, 1407
Cac8I	GCNNGC	5 cut(s)	54, 927, 1120, 1257, 1488
CciI	TCATGA	1 cut(s)	1041
CfoI	GCGC	2 cut(s)	526, 1118
Cfr10I	RCCGGY	1 cut(s)	4
Cfr13I	GGNCC	2 cut(s)	116, 1087
CsiI	ACCWGGT	1 cut(s)	598
Csp6I	GTAC	1 cut(s)	1098
CviAII	CATG	8 cut(s)	161, 839, 926, 1042, 1127, 1286, 1447, 1551
CviQI	GTAC	1 cut(s)	1098
DdeI	CTNAG	8 cut(s)	112, 441, 771, 1179, 1224, 1239, 1362, 1529
DpnI	GATC	5 cut(s)	607, 830, 1026, 1064, 1544
DpnII	GATC	5 cut(s)	605, 828, 1024, 1062, 1542
DraI	TTTAAA	1 cut(s)	1477
EaeI	YGGCCR	1 cut(s)	792
Eam1104I	CTCTTC	2 cut(s)	148, 882
EarI	CTCTTC	2 cut(s)	148, 882
Ecl136II	GAGCTC	1 cut(s)	489
Eco130I	CCWWGG	1 cut(s)	957
Eco24I	GRGCYC	2 cut(s)	491, 748
Eco31I	GGTCTC	1 cut(s)	1155
Eco32I	GATATC	1 cut(s)	1464
Eco53kI	GAGCTC	1 cut(s)	489
Eco57I	CTGAAG	1 cut(s)	1488
Eco81I	CCTNAGG	1 cut(s)	112
Eco88I	CYCGRG	1 cut(s)	998
EcoICRI	GAGCTC	1 cut(s)	489
EcoRII	CCWGG	4 cut(s)	504, 598, 1089, 1270
EcoRV	GATATC	1 cut(s)	1464
EcoT14I	CCWWGG	1 cut(s)	957
EcoT38I	GRGCYC	2 cut(s)	491, 748
ErhI	CCWWGG	1 cut(s)	957
FaeI	CATG	8 cut(s)	164, 842, 929, 1045, 1130, 1289, 1450, 1554
FalI	AAGNNNNNCTT	4 cut(s)	95, 127, 443, 475
FaqI	GGGAC	1 cut(s)	292
FatI	CATG	8 cut(s)	160, 838, 925, 1041, 1126, 1285, 1446, 1550
FauI	CCCGC	1 cut(s)	295
Fnu4HI	GCNGC	6 cut(s)	206, 222, 225, 339, 384, 1515
FokI	GGATG	5 cut(s)	551, 641, 1148, 1230, 1416
FriOI	GRGCYC	2 cut(s)	491, 748
Fsp4HI	GCNGC	6 cut(s)	206, 222, 225, 339, 384, 1515
FspBI	CTAG	3 cut(s)	33, 530, 1256
FspI	TGCGCA	1 cut(s)	525
GlaI	GCGC	2 cut(s)	525, 1117
GluI	GCNGC	6 cut(s)	206, 222, 225, 339, 384, 1515
GsaI	CCCAGC	1 cut(s)	1416
HaeIII	GGCC	6 cut(s)	118, 794, 956, 1089, 1222, 1514
HapII	CCGG	1 cut(s)	5
HhaI	GCGC	2 cut(s)	526, 1118
Hin1I	GRCGYC	1 cut(s)	1422
Hin1II	CATG	8 cut(s)	164, 842, 929, 1045, 1130, 1289, 1450, 1554
Hin6I	GCGC	2 cut(s)	524, 1116
HinP1I	GCGC	2 cut(s)	524, 1116
HincII	GTYRAC	1 cut(s)	859
HindII	GTYRAC	1 cut(s)	859
HindIII	AAGCTT	1 cut(s)	1010
HinfI	GANTC	8 cut(s)	346, 437, 575, 617, 761, 1001, 1267, 1525
HpaI	GTTAAC	1 cut(s)	859
HpaII	CCGG	1 cut(s)	5
HphI	GGTGA	5 cut(s)	284, 341, 832, 983, 1061
Hpy166II	GTNNAC	2 cut(s)	859, 1556
Hpy188I	TCNGA	4 cut(s)	442, 457, 1182, 1468
Hpy188III	TCNNGA	8 cut(s)	103, 257, 398, 644, 998, 1042, 1315, 1431
Hpy8I	GTNNAC	2 cut(s)	859, 1556
HpyAV	CCTTC	4 cut(s)	409, 626, 1309, 1394
HpyCH4III	ACNGT	4 cut(s)	172, 1186, 1358, 1438
HpyCH4IV	ACGT	5 cut(s)	676, 949, 986, 1381, 1422
HpyF3I	CTNAG	8 cut(s)	112, 441, 771, 1179, 1224, 1239, 1362, 1529
HpySE526I	ACGT	5 cut(s)	676, 949, 986, 1381, 1422
Hsp92I	GRCGYC	1 cut(s)	1422
Hsp92II	CATG	8 cut(s)	164, 842, 929, 1045, 1130, 1289, 1450, 1554
HspAI	GCGC	2 cut(s)	524, 1116
KspAI	GTTAAC	1 cut(s)	859
Kzo9I	GATC	5 cut(s)	605, 828, 1024, 1062, 1542
LguI	GCTCTTC	1 cut(s)	882
LmnI	GCTCC	3 cut(s)	185, 494, 514
Lsp1109I	GCAGC	5 cut(s)	192, 211, 233, 350, 395
LweI	GCATC	7 cut(s)	391, 529, 537, 892, 989, 1150, 1394
MabI	ACCWGGT	1 cut(s)	598
MaeI	CTAG	3 cut(s)	33, 530, 1256
MaeII	ACGT	5 cut(s)	676, 949, 986, 1381, 1422
MaeIII	GTNAC	3 cut(s)	166, 172, 961
MalI	GATC	5 cut(s)	607, 830, 1026, 1064, 1544
MboI	GATC	5 cut(s)	605, 828, 1024, 1062, 1542
MboII	GAAGA	8 cut(s)	165, 355, 424, 745, 835, 838, 899, 1276
MfeI	CAATTG	2 cut(s)	87, 918
MhlI	GDGCHC	7 cut(s)	58, 397, 491, 748, 1020, 1312, 1558
MluCI	AATT	9 cut(s)	87, 360, 468, 495, 585, 783, 877, 918, 975
MlyI	GAGTC	3 cut(s)	584, 1010, 1261
MmeI	TCCRAC	1 cut(s)	1349
MseI	TTAA	8 cut(s)	197, 314, 450, 846, 858, 1008, 1476, 1482
MspA1I	CMGCKG	3 cut(s)	224, 386, 868
MspCI	CTTAAG	1 cut(s)	313
MspI	CCGG	1 cut(s)	5
MspR9I	CCNGG	4 cut(s)	506, 600, 1091, 1272
MunI	CAATTG	2 cut(s)	87, 918
Mva1269I	GAATGC	1 cut(s)	691
MvaI	CCWGG	4 cut(s)	506, 600, 1091, 1272
NdeII	GATC	5 cut(s)	605, 828, 1024, 1062, 1542
NheI	GCTAGC	1 cut(s)	1255
NlaIII	CATG	8 cut(s)	164, 842, 929, 1045, 1130, 1289, 1450, 1554
NlaIV	GGNNCC	1 cut(s)	187
NsbI	TGCGCA	1 cut(s)	525
NspI	RCATGY	2 cut(s)	929, 1554
NspV	TTCGAA	1 cut(s)	376
PaeI	GCATGC	1 cut(s)	929
PagI	TCATGA	1 cut(s)	1041
PciI	ACATGT	1 cut(s)	1550
PciSI	GCTCTTC	1 cut(s)	882
PctI	GAATGC	1 cut(s)	691
PfeI	GAWTC	5 cut(s)	346, 437, 617, 761, 1525
PflFI	GACNNNGTC	1 cut(s)	98
PfoI	TCCNGGA	1 cut(s)	1270
PkrI	GCNGC	6 cut(s)	207, 223, 226, 340, 385, 1516
PleI	GAGTC	3 cut(s)	583, 1009, 1261
PpsI	GAGTC	3 cut(s)	583, 1009, 1261
Ppu21I	YACGTR	1 cut(s)	1382
PscI	ACATGT	1 cut(s)	1550
PsiI	TTATAA	1 cut(s)	590
Psp124BI	GAGCTC	1 cut(s)	491
Psp1406I	AACGTT	2 cut(s)	949, 986
Psp6I	CCWGG	4 cut(s)	504, 598, 1089, 1270
PspFI	CCCAGC	1 cut(s)	1412
PspGI	CCWGG	4 cut(s)	504, 598, 1089, 1270
PspN4I	GGNNCC	1 cut(s)	187
PspPI	GGNCC	2 cut(s)	116, 1087
PstI	CTGCAG	1 cut(s)	558
PsyI	GACNNNGTC	1 cut(s)	98
PvuII	CAGCTG	3 cut(s)	224, 386, 868
RsaI	GTAC	1 cut(s)	1099
RsaNI	GTAC	1 cut(s)	1098
SacI	GAGCTC	1 cut(s)	491
SapI	GCTCTTC	1 cut(s)	882
SaqAI	TTAA	8 cut(s)	197, 314, 450, 846, 858, 1008, 1476, 1482
SatI	GCNGC	6 cut(s)	206, 222, 225, 339, 384, 1515
Sau3AI	GATC	5 cut(s)	605, 828, 1024, 1062, 1542
Sau96I	GGNCC	2 cut(s)	116, 1087
SchI	GAGTC	3 cut(s)	584, 1010, 1261
ScrFI	CCNGG	4 cut(s)	506, 600, 1091, 1272
SduI	GDGCHC	7 cut(s)	58, 397, 491, 748, 1020, 1312, 1558
SexAI	ACCWGGT	1 cut(s)	598
SfaNI	GCATC	7 cut(s)	391, 529, 537, 892, 989, 1150, 1394
SfcI	CTRYAG	1 cut(s)	554
SfuI	TTCGAA	1 cut(s)	376
SmlI	CTYRAG	2 cut(s)	313, 611
SmoI	CTYRAG	2 cut(s)	313, 611
SphI	GCATGC	1 cut(s)	929
Sse9I	AATT	9 cut(s)	87, 360, 468, 495, 585, 783, 877, 918, 975
SsiI	CCGC	2 cut(s)	302, 1515
SspMI	CTAG	3 cut(s)	33, 530, 1256
SstI	GAGCTC	1 cut(s)	491
StyD4I	CCNGG	4 cut(s)	504, 598, 1089, 1270
StyI	CCWWGG	1 cut(s)	957
TaaI	ACNGT	4 cut(s)	172, 1186, 1358, 1438
TaiI	ACGT	5 cut(s)	679, 952, 989, 1384, 1425
TaqI	TCGA	2 cut(s)	9, 376
TaqII	GACCGA	1 cut(s)	824
TasI	AATT	9 cut(s)	87, 360, 468, 495, 585, 783, 877, 918, 975
TatI	WGTACW	1 cut(s)	1097
TauI	GCSGC	1 cut(s)	1517
TfiI	GAWTC	5 cut(s)	346, 437, 617, 761, 1525
Tru1I	TTAA	8 cut(s)	197, 314, 450, 846, 858, 1008, 1476, 1482
Tru9I	TTAA	8 cut(s)	197, 314, 450, 846, 858, 1008, 1476, 1482
TscAI	CASTG	4 cut(s)	540, 1025, 1363, 1414
TseI	GCWGC	5 cut(s)	205, 221, 224, 338, 383
TspDTI	ATGAA	6 cut(s)	42, 57, 177, 279, 479, 645
TspRI	CASTG	4 cut(s)	540, 1025, 1363, 1414
Tth111I	GACNNNGTC	1 cut(s)	98
Vha464I	CTTAAG	1 cut(s)	313
VneI	GTGCAC	1 cut(s)	1554
XapI	RAATTY	1 cut(s)	495
XceI	RCATGY	2 cut(s)	929, 1554
XspI	CTAG	3 cut(s)	33, 530, 1256
ZraI	GACGTC	1 cut(s)	1423

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.