Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0011341

Physical Location & Seq

Genomic Coordinates Forward (+)

47791852 .. 47796021

Gene Structure 4170 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0326000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1578 bp

ATGGATACCCTCCTCCTCATTCCGTCATCCATGGCCAAGCGACCTTGCCCCTCCCAAAACCCTAGGCCCCCAAACCACCTCAACCTCCCTGACCGCGACCACCTCCTCGAGACCTTCCTCGACTTCTCCGACTCCCCGCCCTTCGCCATCGATCTCTCCTTCGAGCGGATCCTCGACTCCCGCGACTCCGACGCCGATCAGACCAAGCTCATCGATCGCGCTCTCCAGTTGGGATCGGTGCTCCTCGAGGCCGGTAAGCGCTCGGCGAGACGGCGAGCCTCCAAGCACAACTCCATCGCCTGGGCTCTCCCTCCCGACCTTACCATCAAGGTCTTTTCTATGCTCGATACACAAAGCCTATGCTATGCTGCAGCTACTTGTTCAATGTTTAATAAATGTGCCATGGATCCTTCTTGCTATGCCAATATTGACTTGACAACAGTTGTTCCAAAAGTTAACAATGCAGTAGTTTCCACAATGATTCACCGGGCAGGGAAAGCTCTCCAGTCTCTTAAGCTTGGTGTAGTAGTTCCAGGCCCGACGACGTCACTTGGATCTTGTCAGCCCTTAGTTTATACTATCCGGAACTCTGTAGATGTATCTAACTTTTCATGGAATGATAAGAGATCCAGACAGGGGAAGGAGTCATCGATTCTTTCCAGATCCTGTTTGAGCCCTCTAGGTGGGGACAGTGGTGCTCCAGGGGCTCTTTTGAGAAAATTGCACCTTTACAATATTGAAAGAATGGATAATGCATCACTTTGTGGTGCATTAGCGGCCTGTCCATCTCTCATTGATCTGGAAATTGTTGGCCTTCATGTGGAACTGAGGCAGACATTGGTGTCAGTGAGCACAAACTGTCACTTAATTGAGCGTTTGTTCTTTGAATCCTCTAAATCAGGTAGAGATGACAGTTTGAAATCACCAGCCTGCATTGAGCTTGTGAATAATTGCCCTCATGTAACTTCATTATCCCTCAGAGGTTTTAAACTGCATGATTATAAAGTTCGTATACTTATTAAGGGATTTAGAAAACTAAAGTATGTTGACTTTTCAACATCTTACTCTATCACTGGGTCATTTCTGAGGAACCTTGGAAGCAACACAGGTGGAAATCTGTTGGAAGTTGTGATTTTACGGGATTGCATGCATCTGAAAGTGGCGGAAGTTTATCGGTTGCTGAATGCAGTTCTGTCTGGGGATTTCAAGCTCCTTAGACATCTTGACATATCTAATAGGGAAGGCTTGGCATCTGAGGGTGACTGGTATTATGAAAGATGCTACAGCTTGAGTGTCAATCCCTTAAAGCAGGTTTTGGAACAAAGGCCTCATCTGTGCATACTGGCCGAGTTTCCATCCGAAGGAAGTTTTGCCGACAGTGATCAAATGTTCGACAGTGAGCCATATAGCGATATCAGTCTGCCATCACAGATGAGCACTCATACGTCTGATGGTTCAATGTTTGTGAGTTTTTCCGAGAGTAGCTACAATAGTGATCATGGTAGTGGCAACGAGGATGCTCTGGATGCTAGTTATGTACTTTATGAGGAAAGCTCAGATGAGGTAGAGACTTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005832 GO:0005886 GO:0006457 GO:0006458 GO:0008150 GO:0009987 GO:0016020 GO:0030312 GO:0031224 GO:0031225 GO:0031226 GO:0032991 GO:0044183 GO:0044424 GO:0044425 GO:0044444 GO:0044445 GO:0044459 GO:0044464 GO:0046658 GO:0051082 GO:0061077 GO:0071944 GO:0101031

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cpn60_TCP1

Protein Analysis

525

Amino Acids

58.02

Weight (kDa)

5.81

Isoelectric Point (pI)

51.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box-like	PF12937	101 - 145	2e-08	F-box-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011341)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G20890
fragaria_vesca	FvH4_2g37790 FvH4_2g37790 FvH4_2g37790
malus_domestica	MD08G1005100.v1.1 MD15G1004500.v1.1
prunus_persica	Prupe.1G357200_v2.0.a1
pyrus_communis	pycom08g00400 pycom15g00340
rosa_chinensis	RchiOBHm_Chr6g0303921
rosa_laevigata	RLG00000011034
rosa_multiflora	Rmu_sc0004644.1_g000010
rosa_roxburghii	Rroxscaffold_7G00164260
rosa_rugosa	Rorug06G0325900 Rorug06G0326000
rosa_samantha	Rh6AG440200 Rh6BG462800 Rh6CG452500 Rh6DG439500
rosa_wichuraiana	Rw6G038120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1002
AasI	GACNNNNNNGTC	1 cut(s)	841
AatII	GACGTC	1 cut(s)	548
AbsI	CCTCGAGG	1 cut(s)	245
Acc36I	ACCTGC	1 cut(s)	1300
AccB7I	CCANNNNNTGG	1 cut(s)	300
AccBSI	CCGCTC	1 cut(s)	166
AccI	GTMKAC	1 cut(s)	1012
AccII	CGCG	3 cut(s)	96, 183, 219
AccIII	TCCGGA	1 cut(s)	582
AciI	CCGC	6 cut(s)	94, 137, 166, 181, 776, 1163
AclWI	GGATC	8 cut(s)	163, 176, 241, 401, 414, 562, 621, 657
AcoI	YGGCCR	2 cut(s)	33, 1344
AcyI	GRCGYC	2 cut(s)	192, 545
AdeI	CACNNNGTG	1 cut(s)	764
AfaI	GTAC	1 cut(s)	1539
AfeI	AGCGCT	1 cut(s)	260
AfiI	CCNNNNNNNGG	6 cut(s)	165, 300, 636, 683, 820, 1361
AflII	CTTAAG	1 cut(s)	512
AgsI	TTSAA	7 cut(s)	384, 740, 887, 919, 1056, 1207, 1458
AjnI	CCWGG	3 cut(s)	299, 532, 700
AluBI	AGCT	9 cut(s)	208, 374, 500, 517, 940, 1210, 1287, 1485, 1554
AluI	AGCT	9 cut(s)	208, 374, 500, 517, 940, 1210, 1287, 1485, 1554
Alw21I	GWGCWC	4 cut(s)	243, 700, 854, 1439
Alw26I	GTCTC	4 cut(s)	104, 262, 513, 1562
AlwI	GGATC	8 cut(s)	163, 176, 241, 401, 414, 562, 621, 657
AlwNI	CAGNNNCTG	1 cut(s)	666
Ama87I	CYCGRG	2 cut(s)	107, 245
Aor13HI	TCCGGA	1 cut(s)	582
Aor51HI	AGCGCT	1 cut(s)	260
AoxI	GGCC	8 cut(s)	33, 65, 249, 535, 777, 811, 1325, 1344
ApeKI	GCWGC	2 cut(s)	368, 371
AspA2I	CCTAGG	1 cut(s)	62
AspLEI	GCGC	2 cut(s)	221, 261
AspS9I	GGNCC	2 cut(s)	66, 536
AsuC2I	CCSGG	1 cut(s)	488
AsuHPI	GGTGA	3 cut(s)	476, 915, 1271
AvaI	CYCGRG	2 cut(s)	107, 245
AvrII	CCTAGG	1 cut(s)	62
BalI	TGGCCA	1 cut(s)	35
BamHI	GGATCC	2 cut(s)	168, 406
BanII	GRGCYC	3 cut(s)	307, 677, 709
Bbv12I	GWGCWC	4 cut(s)	243, 700, 854, 1439
BbvI	GCAGC	2 cut(s)	355, 383
BccI	CCATC	7 cut(s)	155, 302, 332, 793, 1363, 1432, 1445
BceAI	ACGGC	1 cut(s)	287
BciT130I	CCWGG	3 cut(s)	301, 534, 702
BclI	TGATCA	2 cut(s)	1381, 1495
BcnI	CCSGG	1 cut(s)	488
BcoDI	GTCTC	4 cut(s)	104, 262, 513, 1562
BfaI	CTAG	3 cut(s)	63, 680, 1530
BfmI	CTRYAG	3 cut(s)	369, 591, 1282
BfoI	RGCGCY	1 cut(s)	262
BfrI	CTTAAG	1 cut(s)	512
BfuAI	ACCTGC	1 cut(s)	1300
BisI	GCNGC	3 cut(s)	369, 372, 777
BlnI	CCTAGG	1 cut(s)	62
BlsI	GCNGC	3 cut(s)	370, 373, 778
Bme1390I	CCNGG	4 cut(s)	301, 488, 534, 702
BmeT110I	CYCGRG	2 cut(s)	107, 245
BmgT120I	GGNCC	2 cut(s)	66, 536
BmiI	GGNNCC	4 cut(s)	68, 170, 408, 1091
BmrFI	CCNGG	4 cut(s)	301, 488, 534, 702
BmrI	ACTGGG	1 cut(s)	1083
BmsI	GCATC	6 cut(s)	764, 1159, 1259, 1268, 1507, 1516
BmuI	ACTGGG	1 cut(s)	1083
BplI	GAGNNNNNCTC	2 cut(s)	1538, 1570
BpmI	CTGGAG	3 cut(s)	209, 488, 684
BpuEI	CTTGAG	1 cut(s)	1309
BpuMI	CCSGG	1 cut(s)	488
Bsa29I	ATCGAT	3 cut(s)	150, 213, 650
BsaHI	GRCGYC	2 cut(s)	192, 545
BsaI	GGTCTC	1 cut(s)	104
BsaJI	CCNNGG	6 cut(s)	30, 62, 300, 402, 701, 1093
BsaWI	WCCGGW	1 cut(s)	582
Bsc4I	CCNNNNNNNGG	6 cut(s)	165, 300, 636, 683, 820, 1361
Bse118I	RCCGGY	1 cut(s)	251
Bse1I	ACTGG	5 cut(s)	226, 505, 1078, 1268, 1347
BseAI	TCCGGA	1 cut(s)	582
BseBI	CCWGG	3 cut(s)	301, 534, 702
BseCI	ATCGAT	3 cut(s)	150, 213, 650
BseDI	CCNNGG	6 cut(s)	30, 62, 300, 402, 701, 1093
BseGI	GGATG	4 cut(s)	26, 1355, 1522, 1531
BseLI	CCNNNNNNNGG	6 cut(s)	165, 300, 636, 683, 820, 1361
BseMII	CTCAG	5 cut(s)	818, 991, 1076, 1245, 1569
BseNI	ACTGG	5 cut(s)	226, 505, 1078, 1268, 1347
BseRI	GAGGAG	3 cut(s)	5, 95, 233
BseXI	GCAGC	2 cut(s)	355, 383
Bsh1236I	CGCG	3 cut(s)	96, 183, 219
Bsh1285I	CGRYCG	1 cut(s)	217
BshFI	GGCC	8 cut(s)	35, 67, 251, 537, 779, 813, 1327, 1346
BshVI	ATCGAT	3 cut(s)	150, 213, 650
BsiEI	CGRYCG	1 cut(s)	217
BsiHKAI	GWGCWC	4 cut(s)	243, 700, 854, 1439
BsiHKCI	CYCGRG	2 cut(s)	107, 245
BsiSI	CCGG	3 cut(s)	252, 487, 583
BslFI	GGGAC	1 cut(s)	701
BslI	CCNNNNNNNGG	6 cut(s)	165, 300, 636, 683, 820, 1361
BsmAI	GTCTC	4 cut(s)	104, 262, 513, 1562
BsmBI	CGTCTC	1 cut(s)	262
BsmFI	GGGAC	1 cut(s)	701
BsmI	GAATGC	1 cut(s)	1189
BsnI	GGCC	8 cut(s)	35, 67, 251, 537, 779, 813, 1327, 1346
Bso31I	GGTCTC	1 cut(s)	104
BsoBI	CYCGRG	2 cut(s)	107, 245
Bsp1286I	GDGCHC	7 cut(s)	243, 307, 677, 700, 709, 854, 1439
Bsp13I	TCCGGA	1 cut(s)	582
Bsp19I	CCATGG	2 cut(s)	30, 402
BspACI	CCGC	6 cut(s)	94, 137, 166, 181, 776, 1163
BspANI	GGCC	8 cut(s)	35, 67, 251, 537, 779, 813, 1327, 1346
BspCNI	CTCAG	5 cut(s)	819, 990, 1077, 1246, 1568
BspDI	ATCGAT	3 cut(s)	150, 213, 650
BspEI	TCCGGA	1 cut(s)	582
BspFNI	CGCG	3 cut(s)	96, 183, 219
BspLI	GGNNCC	4 cut(s)	68, 170, 408, 1091
BspMAI	CTGCAG	1 cut(s)	373
BspMI	ACCTGC	1 cut(s)	1300
BspPI	GGATC	8 cut(s)	163, 176, 241, 401, 414, 562, 621, 657
BspTI	CTTAAG	1 cut(s)	512
BspTNI	GGTCTC	1 cut(s)	104
BsrBI	CCGCTC	1 cut(s)	166
BsrFI	RCCGGY	1 cut(s)	251
BsrI	ACTGG	5 cut(s)	226, 505, 1078, 1268, 1347
BssAI	RCCGGY	1 cut(s)	251
BssECI	CCNNGG	6 cut(s)	30, 62, 300, 402, 701, 1093
BssNAI	GTATAC	1 cut(s)	1013
BssNI	GRCGYC	2 cut(s)	192, 545
BssT1I	CCWWGG	4 cut(s)	30, 62, 402, 1093
Bst1107I	GTATAC	1 cut(s)	1013
Bst2UI	CCWGG	3 cut(s)	301, 534, 702
Bst4CI	ACNGT	6 cut(s)	442, 692, 860, 914, 1379, 1397
BstACI	GRCGYC	2 cut(s)	192, 545
BstAFI	CTTAAG	1 cut(s)	512
BstC8I	GCNNGC	3 cut(s)	276, 931, 1148
BstDEI	CTNAG	7 cut(s)	568, 827, 977, 1085, 1214, 1254, 1555
BstDSI	CCRYGG	2 cut(s)	30, 402
BstF5I	GGATG	4 cut(s)	26, 1355, 1522, 1531
BstFNI	CGCG	3 cut(s)	96, 183, 219
BstH2I	RGCGCY	1 cut(s)	262
BstHHI	GCGC	2 cut(s)	221, 261
BstMAI	GTCTC	4 cut(s)	104, 262, 513, 1562
BstMCI	CGRYCG	1 cut(s)	217
BstMWI	GCNNNNNNNGC	4 cut(s)	497, 704, 776, 1526
BstNI	CCWGG	3 cut(s)	301, 534, 702
BstNSI	RCATGY	1 cut(s)	1150
BstSCI	CCNGG	4 cut(s)	299, 486, 532, 700
BstSFI	CTRYAG	3 cut(s)	369, 591, 1282
BstUI	CGCG	3 cut(s)	96, 183, 219
BstV1I	GCAGC	2 cut(s)	355, 383
BstX2I	RGATCY	5 cut(s)	168, 406, 554, 626, 662
BstYI	RGATCY	5 cut(s)	168, 406, 554, 626, 662
BstZ17I	GTATAC	1 cut(s)	1013
Bsu15I	ATCGAT	3 cut(s)	150, 213, 650
BsuRI	GGCC	8 cut(s)	35, 67, 251, 537, 779, 813, 1327, 1346
BsuTUI	ATCGAT	3 cut(s)	150, 213, 650
BtgI	CCRYGG	2 cut(s)	30, 402
BtgZI	GCGATG	1 cut(s)	280
BtsCI	GGATG	4 cut(s)	26, 1355, 1522, 1531
BtsIMutI	CAGTG	5 cut(s)	697, 852, 1071, 1384, 1402
BveI	ACCTGC	1 cut(s)	1300
Cac8I	GCNNGC	3 cut(s)	276, 931, 1148
CaiI	CAGNNNCTG	1 cut(s)	666
CfoI	GCGC	2 cut(s)	221, 261
Cfr10I	RCCGGY	1 cut(s)	251
Cfr13I	GGNCC	2 cut(s)	66, 536
ClaI	ATCGAT	3 cut(s)	150, 213, 650
CseI	GACGC	1 cut(s)	200
Csp6I	GTAC	1 cut(s)	1538
CspCI	CAANNNNNGTGG	2 cut(s)	1090, 1125
CviAII	CATG	8 cut(s)	31, 403, 612, 818, 959, 995, 1147, 1499
CviQI	GTAC	1 cut(s)	1538
DdeI	CTNAG	7 cut(s)	568, 827, 977, 1085, 1214, 1254, 1555
DraI	TTTAAA	1 cut(s)	988
DraIII	CACNNNGTG	1 cut(s)	764
DrdI	GACNNNNNNGTC	1 cut(s)	841
DseDI	GACNNNNNNGTC	1 cut(s)	841
EaeI	YGGCCR	2 cut(s)	33, 1344
EciI	GGCGGA	1 cut(s)	1178
Eco130I	CCWWGG	4 cut(s)	30, 62, 402, 1093
Eco147I	AGGCCT	1 cut(s)	1327
Eco24I	GRGCYC	3 cut(s)	307, 677, 709
Eco31I	GGTCTC	1 cut(s)	104
Eco32I	GATATC	1 cut(s)	1414
Eco47III	AGCGCT	1 cut(s)	260
Eco88I	CYCGRG	2 cut(s)	107, 245
EcoO109I	RGGNCCY	1 cut(s)	66
EcoRII	CCWGG	3 cut(s)	299, 532, 700
EcoRV	GATATC	1 cut(s)	1414
EcoT14I	CCWWGG	4 cut(s)	30, 62, 402, 1093
EcoT22I	ATGCAT	2 cut(s)	757, 1152
EcoT38I	GRGCYC	3 cut(s)	307, 677, 709
ErhI	CCWWGG	4 cut(s)	30, 62, 402, 1093
Esp3I	CGTCTC	1 cut(s)	262
FaeI	CATG	8 cut(s)	34, 406, 615, 821, 962, 998, 1150, 1502
FaqI	GGGAC	1 cut(s)	701
FatI	CATG	8 cut(s)	30, 402, 611, 817, 958, 994, 1146, 1498
FauI	CCCGC	2 cut(s)	144, 188
FbaI	TGATCA	2 cut(s)	1381, 1495
FblI	GTMKAC	1 cut(s)	1012
Fnu4HI	GCNGC	3 cut(s)	369, 372, 777
FokI	GGATG	4 cut(s)	13, 1342, 1529, 1538
FriOI	GRGCYC	3 cut(s)	307, 677, 709
Fsp4HI	GCNGC	3 cut(s)	369, 372, 777
FspBI	CTAG	3 cut(s)	63, 680, 1530
GlaI	GCGC	2 cut(s)	220, 260
GluI	GCNGC	3 cut(s)	369, 372, 777
GsuI	CTGGAG	3 cut(s)	209, 488, 684
HaeII	RGCGCY	1 cut(s)	262
HaeIII	GGCC	8 cut(s)	35, 67, 251, 537, 779, 813, 1327, 1346
HapII	CCGG	3 cut(s)	252, 487, 583
HgaI	GACGC	1 cut(s)	200
HhaI	GCGC	2 cut(s)	221, 261
Hin1I	GRCGYC	2 cut(s)	192, 545
Hin1II	CATG	8 cut(s)	34, 406, 615, 821, 962, 998, 1150, 1502
Hin6I	GCGC	2 cut(s)	219, 259
HinP1I	GCGC	2 cut(s)	219, 259
HincII	GTYRAC	2 cut(s)	457, 1048
HindII	GTYRAC	2 cut(s)	457, 1048
HindIII	AAGCTT	1 cut(s)	515
HinfI	GANTC	7 cut(s)	131, 176, 185, 481, 644, 652, 887
HpaI	GTTAAC	1 cut(s)	457
HpaII	CCGG	3 cut(s)	252, 487, 583
HphI	GGTGA	3 cut(s)	476, 915, 1271
Hpy166II	GTNNAC	3 cut(s)	457, 1013, 1048
Hpy188III	TCNNGA	8 cut(s)	109, 314, 583, 630, 660, 800, 1223, 1523
Hpy8I	GTNNAC	3 cut(s)	457, 1013, 1048
Hpy99I	CGWCG	3 cut(s)	194, 544, 547
HpyAV	CCTTC	8 cut(s)	124, 151, 169, 420, 634, 824, 1235, 1355
HpyCH4III	ACNGT	6 cut(s)	442, 692, 860, 914, 1379, 1397
HpyCH4IV	ACGT	2 cut(s)	545, 1445
HpyF10VI	GCNNNNNNNGC	4 cut(s)	497, 704, 776, 1526
HpyF3I	CTNAG	7 cut(s)	568, 827, 977, 1085, 1214, 1254, 1555
HpySE526I	ACGT	2 cut(s)	545, 1445
Hsp92I	GRCGYC	2 cut(s)	192, 545
Hsp92II	CATG	8 cut(s)	34, 406, 615, 821, 962, 998, 1150, 1502
HspAI	GCGC	2 cut(s)	219, 259
Kpn2I	TCCGGA	1 cut(s)	582
Ksp22I	TGATCA	2 cut(s)	1381, 1495
KspAI	GTTAAC	1 cut(s)	457
LmnI	GCTCC	3 cut(s)	246, 703, 1215
Lsp1109I	GCAGC	2 cut(s)	355, 383
LweI	GCATC	6 cut(s)	764, 1159, 1259, 1268, 1507, 1516
MaeI	CTAG	3 cut(s)	63, 680, 1530
MaeII	ACGT	2 cut(s)	545, 1445
MaeIII	GTNAC	4 cut(s)	546, 860, 961, 1259
MbiI	CCGCTC	1 cut(s)	166
MflI	RGATCY	5 cut(s)	168, 406, 554, 626, 662
MhlI	GDGCHC	7 cut(s)	243, 307, 677, 700, 709, 854, 1439
MlsI	TGGCCA	1 cut(s)	35
MluCI	AATT	4 cut(s)	719, 804, 867, 949
MluNI	TGGCCA	1 cut(s)	35
MlyI	GAGTC	4 cut(s)	125, 170, 179, 653
MmeI	TCCRAC	3 cut(s)	153, 213, 1101
Mox20I	TGGCCA	1 cut(s)	35
Mph1103I	ATGCAT	2 cut(s)	757, 1152
MroI	TCCGGA	1 cut(s)	582
MscI	TGGCCA	1 cut(s)	35
MseI	TTAA	7 cut(s)	390, 456, 513, 866, 987, 1020, 1304
MslI	CAYNNNNRTG	1 cut(s)	1503
Msp20I	TGGCCA	1 cut(s)	35
MspCI	CTTAAG	1 cut(s)	512
MspI	CCGG	3 cut(s)	252, 487, 583
MspR9I	CCNGG	4 cut(s)	301, 488, 534, 702
Mva1269I	GAATGC	1 cut(s)	1189
MvaI	CCWGG	3 cut(s)	301, 534, 702
MvnI	CGCG	3 cut(s)	96, 183, 219
MwoI	GCNNNNNNNGC	4 cut(s)	497, 704, 776, 1526
NciI	CCSGG	1 cut(s)	488
NcoI	CCATGG	2 cut(s)	30, 402
NlaIII	CATG	8 cut(s)	34, 406, 615, 821, 962, 998, 1150, 1502
NlaIV	GGNNCC	4 cut(s)	68, 170, 408, 1091
NmeAIII	GCCGAG	2 cut(s)	242, 1372
NmuCI	GTSAC	3 cut(s)	546, 860, 1259
NsiI	ATGCAT	2 cut(s)	757, 1152
NspI	RCATGY	1 cut(s)	1150
PaeI	GCATGC	1 cut(s)	1150
PaeR7I	CTCGAG	2 cut(s)	107, 245
PceI	AGGCCT	1 cut(s)	1327
PcsI	WCGNNNNNNNCGW	2 cut(s)	126, 180
PctI	GAATGC	1 cut(s)	1189
PfeI	GAWTC	3 cut(s)	481, 652, 887
PflFI	GACNNNGTC	1 cut(s)	544
PflMI	CCANNNNNTGG	1 cut(s)	300
PkrI	GCNGC	3 cut(s)	370, 373, 778
Ple19I	CGATCG	1 cut(s)	217
PleI	GAGTC	4 cut(s)	125, 170, 179, 652
PpsI	GAGTC	4 cut(s)	125, 170, 179, 652
PsiI	TTATAA	1 cut(s)	1002
Psp6I	CCWGG	3 cut(s)	299, 532, 700
PspGI	CCWGG	3 cut(s)	299, 532, 700
PspN4I	GGNNCC	4 cut(s)	68, 170, 408, 1091
PspPI	GGNCC	2 cut(s)	66, 536
PspXI	VCTCGAGB	1 cut(s)	245
PstI	CTGCAG	1 cut(s)	373
PstNI	CAGNNNCTG	1 cut(s)	666
PsuI	RGATCY	5 cut(s)	168, 406, 554, 626, 662
PsyI	GACNNNGTC	1 cut(s)	544
PvuI	CGATCG	1 cut(s)	217
RsaI	GTAC	1 cut(s)	1539
RsaNI	GTAC	1 cut(s)	1538
RseI	CAYNNNNRTG	1 cut(s)	1503
SaqAI	TTAA	7 cut(s)	390, 456, 513, 866, 987, 1020, 1304
SatI	GCNGC	3 cut(s)	369, 372, 777
Sau96I	GGNCC	2 cut(s)	66, 536
SchI	GAGTC	4 cut(s)	125, 170, 179, 653
ScrFI	CCNGG	4 cut(s)	301, 488, 534, 702
SduI	GDGCHC	7 cut(s)	243, 307, 677, 700, 709, 854, 1439
SfaNI	GCATC	6 cut(s)	764, 1159, 1259, 1268, 1507, 1516
SfcI	CTRYAG	3 cut(s)	369, 591, 1282
Sfr274I	CTCGAG	2 cut(s)	107, 245
SlaI	CTCGAG	2 cut(s)	107, 245
SmiMI	CAYNNNNRTG	1 cut(s)	1503
SmlI	CTYRAG	4 cut(s)	107, 245, 512, 1288
SmoI	CTYRAG	4 cut(s)	107, 245, 512, 1288
SphI	GCATGC	1 cut(s)	1150
Sse9I	AATT	4 cut(s)	719, 804, 867, 949
SseBI	AGGCCT	1 cut(s)	1327
SsiI	CCGC	6 cut(s)	94, 137, 166, 181, 776, 1163
SspI	AATATT	2 cut(s)	427, 736
SspMI	CTAG	3 cut(s)	63, 680, 1530
StuI	AGGCCT	1 cut(s)	1327
StyD4I	CCNGG	4 cut(s)	299, 486, 532, 700
StyI	CCWWGG	4 cut(s)	30, 62, 402, 1093
TaaI	ACNGT	6 cut(s)	442, 692, 860, 914, 1379, 1397
TaiI	ACGT	2 cut(s)	548, 1448
TasI	AATT	4 cut(s)	719, 804, 867, 949
TatI	WGTACW	1 cut(s)	1537
TauI	GCSGC	1 cut(s)	779
TfiI	GAWTC	3 cut(s)	481, 652, 887
Tru1I	TTAA	7 cut(s)	390, 456, 513, 866, 987, 1020, 1304
Tru9I	TTAA	7 cut(s)	390, 456, 513, 866, 987, 1020, 1304
TscAI	CASTG	5 cut(s)	697, 852, 1078, 1384, 1402
TseFI	GTSAC	3 cut(s)	546, 860, 1259
TseI	GCWGC	2 cut(s)	368, 371
Tsp45I	GTSAC	3 cut(s)	546, 860, 1259
TspDTI	ATGAA	4 cut(s)	600, 806, 957, 1287
TspGWI	ACGGA	1 cut(s)	12
TspRI	CASTG	5 cut(s)	697, 852, 1078, 1384, 1402
Tth111I	GACNNNGTC	1 cut(s)	544
Van91I	CCANNNNNTGG	1 cut(s)	300
Vha464I	CTTAAG	1 cut(s)	512
XceI	RCATGY	1 cut(s)	1150
XhoI	CTCGAG	2 cut(s)	107, 245
XmaJI	CCTAGG	1 cut(s)	62
XmiI	GTMKAC	1 cut(s)	1012
XspI	CTAG	3 cut(s)	63, 680, 1530
ZraI	GACGTC	1 cut(s)	546
Zsp2I	ATGCAT	2 cut(s)	757, 1152

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.