Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0011341

Physical Location & Seq

Genomic Coordinates Reverse (-)

62805918 .. 62811104

Gene Structure 5187 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG440200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1503 bp

ATGGCAATTGCTGACCTCGTCAAGACAACCTTAGGGCCAAAGGGAATGGATAAAATACTGCAATCAACAGGAAGAGGACATGAAGTTACTGTTACCAATGATGGAGCCACCATCTTAAAGTCGCTGCATATTGACAATGCAGCTGCTAAAGTCCTTGTTGATATTTCAAAAGTTCAAGATGATGAAGTTGGTGATGGGACAACTTCTGTTGTTGTTCTGGCGGGAGAACTCTTAAGGGAGGCAGAAAAGCTGGTTGCAGCGAAGATTCACCCAATGACAATTATATCAGGTTATCGAATGGCAGCTGAATGTGCTCGTGATGCTTTGTTGAAGAAGGTTGTTGATAATAAGGCTGATTCTGAGAGATTTAAGTCAGACTTGATGAAAATTGCAAAGACTACTTTGAGCTCCAAAATTCTTTCCCAGGATAAGGAGCATTTTGCGCAACTAGCAGTGGATGCTGTGATGCGACTGCAGGGAAGCACCAACTTGGAGTCTATCCAAATTATAAAGAAACCTGGTGGATCACTCAAGGATTCTTTTTTGGATGAAGGATTTATTCTTGACAAGAAAATAGGTCTTGGTCAGCCCAAACGTATAGAGAATGCCAAGATTTTGGTTGCAAATACAGCAATGGACACAGACAAAGTGAAGATTTATGGGGCTCGTGTTCGTGTTGATTCAATGTCTAAGGTTGCTGATATTGAAGTGGCCGAAAAAGAAAAAATGAGGGAAAAGGTGAAGAAGATCATCGGTCATGGGATTAACTGCTTTGTTAACAGACAGCTGATTTACAATTTCCCAGAAGAGCTGTTTGCAGATGCAGGAATACTTGCAATTGAGCATGCTGATTTTGATGGCATTGAACGTTTGGCCTTGGTAACTGGTGGTGAAATTGCATCAACGTTTGATAATCCCGAGTCAGTTAAGCTTGGGCACTGTGATCTCATTGAGGAAATCATGATTGGTGAGGACAAGTTGATCCACTTTTCTGGTGTTGAACTGGGCCAGGCTTGTACAATAGTATTGAGAGGCGCAAGCCATCATGTGCTGGATGAGGCTGAAAGGTCTCTGCACGATGCCTTGTGTGTTCTGTCTCAGACAGTCAATGACAGCAGGGTTTTGCTTGGAGGTGGATGGCCTGAGATGATTATGGCTAAGGAAGTTGATGTGCTAGCCAAGAAGACTCCTGGAAAGAAATCTCATGCTATTGAAGCCTTCGCACGGGCACTCTTGACCATTCCAACTATCATTGCTGACAATGCTGGTTTGGACAGTGCTGAGTTGGTTGCACAGCTACGTGCTGAACACCACAAGGAAGGATGCACTGCTGGGATTGACGTCATCTCTGGAACTGTGGGAGACATGGCAGAACGAGGGATATCTGAAGCGTTTAAAGTTAAGCAGGCTGTCTTGCTCTCTGCGACAGAGGCCGCAGAGATGATTCTTAGAGTTGATGAGATCATCACATGTGCACCACGACAGAGAGAAAATAGAATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005832 GO:0005886 GO:0006457 GO:0006458 GO:0008150 GO:0009987 GO:0016020 GO:0030312 GO:0031224 GO:0031225 GO:0031226 GO:0032991 GO:0044183 GO:0044424 GO:0044425 GO:0044444 GO:0044445 GO:0044459 GO:0044464 GO:0046658 GO:0051082 GO:0061077 GO:0071944 GO:0101031

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cpn60_TCP1

Protein Analysis

500

Amino Acids

54.14

Weight (kDa)

5.7

Isoelectric Point (pI)

28.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cpn60_TCP1	PF00118	3 - 491	1.3e-157	TCP-1/cpn60 chaperonin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011341)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G20890
fragaria_vesca	FvH4_2g37790 FvH4_2g37790 FvH4_2g37790
malus_domestica	MD08G1005100.v1.1 MD15G1004500.v1.1
prunus_persica	Prupe.1G357200_v2.0.a1
pyrus_communis	pycom08g00400 pycom15g00340
rosa_chinensis	RchiOBHm_Chr6g0303921
rosa_laevigata	RLG00000011034
rosa_multiflora	Rmu_sc0004644.1_g000010
rosa_roxburghii	Rroxscaffold_7G00164260
rosa_rugosa	Rorug06G0325900 Rorug06G0326000
rosa_samantha	Rh6AG440200 Rh6BG462800 Rh6CG452500 Rh6DG439500
rosa_wichuraiana	Rw6G038120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	509
AatII	GACGTC	1 cut(s)	1344
Acc16I	TGCGCA	1 cut(s)	444
AciI	CCGC	2 cut(s)	221, 1434
AclI	AACGTT	2 cut(s)	868, 905
AclWI	GGATC	2 cut(s)	532, 976
AcoI	YGGCCR	1 cut(s)	711
AcsI	RAATTY	1 cut(s)	414
AcuI	CTGAAG	1 cut(s)	1407
AcyI	GRCGYC	1 cut(s)	1341
AfaI	GTAC	1 cut(s)	1018
AfiI	CCNNNNNNNGG	2 cut(s)	430, 1224
AflII	CTTAAG	1 cut(s)	232
AflIII	ACRYGT	1 cut(s)	1469
AgsI	TTSAA	8 cut(s)	168, 176, 331, 684, 707, 866, 1001, 1214
AjnI	CCWGG	4 cut(s)	423, 517, 1008, 1189
AjuI	GAANNNNNNNTTGG	2 cut(s)	948, 980
AluBI	AGCT	8 cut(s)	143, 250, 305, 408, 787, 811, 931, 1297
AluI	AGCT	8 cut(s)	143, 250, 305, 408, 787, 811, 931, 1297
Alw21I	GWGCWC	3 cut(s)	316, 410, 1477
Alw26I	GTCTC	3 cut(s)	1074, 1101, 1356
Alw44I	GTGCAC	1 cut(s)	1473
AlwI	GGATC	2 cut(s)	532, 976
Ama87I	CYCGRG	1 cut(s)	917
AoxI	GGCC	6 cut(s)	35, 711, 873, 1006, 1139, 1431
ApaLI	GTGCAC	1 cut(s)	1473
ApeKI	GCWGC	5 cut(s)	124, 140, 143, 257, 302
ApoI	RAATTY	1 cut(s)	414
AspLEI	GCGC	2 cut(s)	445, 1037
AspS9I	GGNCC	2 cut(s)	35, 1006
AsuHPI	GGTGA	5 cut(s)	203, 260, 751, 902, 980
AsuNHI	GCTAGC	1 cut(s)	1174
AvaI	CYCGRG	1 cut(s)	917
AxyI	CCTNAGG	1 cut(s)	31
BaeGI	GKGCMC	3 cut(s)	939, 1231, 1477
BanII	GRGCYC	2 cut(s)	410, 667
BauI	CACGAG	2 cut(s)	315, 666
BbsI	GAAGAC	1 cut(s)	1190
Bbv12I	GWGCWC	3 cut(s)	316, 410, 1477
BbvI	GCAGC	5 cut(s)	111, 130, 152, 269, 314
BccI	CCATC	6 cut(s)	95, 119, 188, 851, 1050, 1131
BciT130I	CCWGG	4 cut(s)	425, 519, 1010, 1191
BcoDI	GTCTC	3 cut(s)	1074, 1101, 1356
BfaI	CTAG	2 cut(s)	449, 1175
BfmI	CTRYAG	1 cut(s)	473
BfrI	CTTAAG	1 cut(s)	232
BisI	GCNGC	6 cut(s)	125, 141, 144, 258, 303, 1434
BlsI	GCNGC	6 cut(s)	126, 142, 145, 259, 304, 1435
Bme1390I	CCNGG	4 cut(s)	425, 519, 1010, 1191
BmeT110I	CYCGRG	1 cut(s)	917
BmgT120I	GGNCC	2 cut(s)	35, 1006
BmiI	GGNNCC	1 cut(s)	106
BmrFI	CCNGG	4 cut(s)	425, 519, 1010, 1191
BmrI	ACTGGG	1 cut(s)	1013
BmsI	GCATC	7 cut(s)	310, 448, 456, 811, 908, 1069, 1313
BmtI	GCTAGC	1 cut(s)	1178
BmuI	ACTGGG	1 cut(s)	1013
BpiI	GAAGAC	1 cut(s)	1190
Bpu10I	CCTNAGC	1 cut(s)	1158
BpuEI	CTTGAG	1 cut(s)	515
BsaAI	YACGTR	1 cut(s)	1301
BsaHI	GRCGYC	1 cut(s)	1341
BsaI	GGTCTC	1 cut(s)	1074
BsaJI	CCNNGG	2 cut(s)	423, 876
Bsc4I	CCNNNNNNNGG	2 cut(s)	430, 1224
Bse1I	ACTGG	2 cut(s)	889, 1008
Bse21I	CCTNAGG	1 cut(s)	31
Bse3DI	GCAATG	2 cut(s)	639, 1251
BseBI	CCWGG	4 cut(s)	425, 519, 1010, 1191
BseDI	CCNNGG	2 cut(s)	423, 876
BseGI	GGATG	5 cut(s)	463, 553, 1060, 1142, 1328
BseLI	CCNNNNNNNGG	2 cut(s)	430, 1224
BseMI	GCAATG	2 cut(s)	639, 1251
BseMII	CTCAG	4 cut(s)	351, 1112, 1134, 1272
BseNI	ACTGG	2 cut(s)	889, 1008
BseSI	GKGCMC	3 cut(s)	939, 1231, 1477
BseXI	GCAGC	5 cut(s)	111, 130, 152, 269, 314
BseYI	CCCAGC	1 cut(s)	1331
BsgI	GTGCAG	1 cut(s)	1058
BshFI	GGCC	6 cut(s)	37, 713, 875, 1008, 1141, 1433
BsiHKAI	GWGCWC	3 cut(s)	316, 410, 1477
BsiHKCI	CYCGRG	1 cut(s)	917
BslFI	GGGAC	1 cut(s)	211
BslI	CCNNNNNNNGG	2 cut(s)	430, 1224
BsmAI	GTCTC	3 cut(s)	1074, 1101, 1356
BsmFI	GGGAC	1 cut(s)	211
BsmI	GAATGC	1 cut(s)	610
BsnI	GGCC	6 cut(s)	37, 713, 875, 1008, 1141, 1433
Bso31I	GGTCTC	1 cut(s)	1074
BsoBI	CYCGRG	1 cut(s)	917
Bsp1286I	GDGCHC	6 cut(s)	316, 410, 667, 939, 1231, 1477
Bsp1407I	TGTACA	1 cut(s)	1016
Bsp143I	GATC	5 cut(s)	524, 747, 943, 981, 1461
BspACI	CCGC	2 cut(s)	221, 1434
BspANI	GGCC	6 cut(s)	37, 713, 875, 1008, 1141, 1433
BspCNI	CTCAG	4 cut(s)	352, 1111, 1135, 1273
BspHI	TCATGA	1 cut(s)	960
BspLI	GGNNCC	1 cut(s)	106
BspMAI	CTGCAG	1 cut(s)	477
BspOI	GCTAGC	1 cut(s)	1178
BspPI	GGATC	2 cut(s)	532, 976
BspQI	GCTCTTC	1 cut(s)	801
BspTI	CTTAAG	1 cut(s)	232
BspTNI	GGTCTC	1 cut(s)	1074
BsrDI	GCAATG	2 cut(s)	639, 1251
BsrGI	TGTACA	1 cut(s)	1016
BsrI	ACTGG	2 cut(s)	889, 1008
BssECI	CCNNGG	2 cut(s)	423, 876
BssMI	GATC	5 cut(s)	524, 747, 943, 981, 1461
BssNI	GRCGYC	1 cut(s)	1341
BssSI	CACGAG	2 cut(s)	315, 666
BssT1I	CCWWGG	1 cut(s)	876
Bst2BI	CACGAG	2 cut(s)	315, 666
Bst2UI	CCWGG	4 cut(s)	425, 519, 1010, 1191
Bst4CI	ACNGT	5 cut(s)	91, 941, 1105, 1277, 1357
Bst6I	CTCTTC	2 cut(s)	67, 801
BstACI	GRCGYC	1 cut(s)	1341
BstAFI	CTTAAG	1 cut(s)	232
BstAPI	GCANNNNNTGC	1 cut(s)	458
BstAUI	TGTACA	1 cut(s)	1016
BstBAI	YACGTR	1 cut(s)	1301
BstC8I	GCNNGC	4 cut(s)	846, 1039, 1176, 1407
BstDEI	CTNAG	8 cut(s)	31, 360, 690, 1098, 1143, 1158, 1281, 1448
BstF5I	GGATG	5 cut(s)	463, 553, 1060, 1142, 1328
BstHHI	GCGC	2 cut(s)	445, 1037
BstKTI	GATC	5 cut(s)	527, 750, 946, 984, 1464
BstMAI	GTCTC	3 cut(s)	1074, 1101, 1356
BstMBI	GATC	5 cut(s)	524, 747, 943, 981, 1461
BstMWI	GCNNNNNNNGC	9 cut(s)	311, 320, 442, 449, 458, 629, 1214, 1262, 1430
BstNI	CCWGG	4 cut(s)	425, 519, 1010, 1191
BstNSI	RCATGY	2 cut(s)	848, 1473
BstSCI	CCNGG	4 cut(s)	423, 517, 1008, 1189
BstSFI	CTRYAG	1 cut(s)	473
BstSLI	GKGCMC	3 cut(s)	939, 1231, 1477
BstV1I	GCAGC	5 cut(s)	111, 130, 152, 269, 314
BstV2I	GAAGAC	1 cut(s)	1190
BstXI	CCANNNNNNTGG	2 cut(s)	616, 992
Bsu36I	CCTNAGG	1 cut(s)	31
BsuRI	GGCC	6 cut(s)	37, 713, 875, 1008, 1141, 1433
BtsCI	GGATG	5 cut(s)	463, 553, 1060, 1142, 1328
BtsI	GCAGTG	2 cut(s)	459, 1326
BtsIMutI	CAGTG	4 cut(s)	459, 937, 1282, 1326
Cac8I	GCNNGC	4 cut(s)	846, 1039, 1176, 1407
CciI	TCATGA	1 cut(s)	960
CfoI	GCGC	2 cut(s)	445, 1037
Cfr13I	GGNCC	2 cut(s)	35, 1006
CsiI	ACCWGGT	1 cut(s)	517
Csp6I	GTAC	1 cut(s)	1017
CviAII	CATG	8 cut(s)	80, 758, 845, 961, 1046, 1205, 1366, 1470
CviQI	GTAC	1 cut(s)	1017
DdeI	CTNAG	8 cut(s)	31, 360, 690, 1098, 1143, 1158, 1281, 1448
DpnI	GATC	5 cut(s)	526, 749, 945, 983, 1463
DpnII	GATC	5 cut(s)	524, 747, 943, 981, 1461
DraI	TTTAAA	1 cut(s)	1396
EaeI	YGGCCR	1 cut(s)	711
Eam1104I	CTCTTC	2 cut(s)	67, 801
EarI	CTCTTC	2 cut(s)	67, 801
Ecl136II	GAGCTC	1 cut(s)	408
Eco130I	CCWWGG	1 cut(s)	876
Eco24I	GRGCYC	2 cut(s)	410, 667
Eco31I	GGTCTC	1 cut(s)	1074
Eco32I	GATATC	1 cut(s)	1383
Eco53kI	GAGCTC	1 cut(s)	408
Eco57I	CTGAAG	1 cut(s)	1407
Eco81I	CCTNAGG	1 cut(s)	31
Eco88I	CYCGRG	1 cut(s)	917
EcoICRI	GAGCTC	1 cut(s)	408
EcoRII	CCWGG	4 cut(s)	423, 517, 1008, 1189
EcoRV	GATATC	1 cut(s)	1383
EcoT14I	CCWWGG	1 cut(s)	876
EcoT38I	GRGCYC	2 cut(s)	410, 667
ErhI	CCWWGG	1 cut(s)	876
FaeI	CATG	8 cut(s)	83, 761, 848, 964, 1049, 1208, 1369, 1473
FalI	AAGNNNNNCTT	4 cut(s)	14, 46, 362, 394
FaqI	GGGAC	1 cut(s)	211
FatI	CATG	8 cut(s)	79, 757, 844, 960, 1045, 1204, 1365, 1469
FauI	CCCGC	1 cut(s)	214
Fnu4HI	GCNGC	6 cut(s)	125, 141, 144, 258, 303, 1434
FokI	GGATG	5 cut(s)	470, 560, 1067, 1149, 1335
FriOI	GRGCYC	2 cut(s)	410, 667
Fsp4HI	GCNGC	6 cut(s)	125, 141, 144, 258, 303, 1434
FspBI	CTAG	2 cut(s)	449, 1175
FspI	TGCGCA	1 cut(s)	444
GlaI	GCGC	2 cut(s)	444, 1036
GluI	GCNGC	6 cut(s)	125, 141, 144, 258, 303, 1434
GsaI	CCCAGC	1 cut(s)	1335
HaeIII	GGCC	6 cut(s)	37, 713, 875, 1008, 1141, 1433
HhaI	GCGC	2 cut(s)	445, 1037
Hin1I	GRCGYC	1 cut(s)	1341
Hin1II	CATG	8 cut(s)	83, 761, 848, 964, 1049, 1208, 1369, 1473
Hin6I	GCGC	2 cut(s)	443, 1035
HinP1I	GCGC	2 cut(s)	443, 1035
HincII	GTYRAC	1 cut(s)	778
HindII	GTYRAC	1 cut(s)	778
HindIII	AAGCTT	1 cut(s)	929
HinfI	GANTC	8 cut(s)	265, 356, 494, 536, 680, 920, 1186, 1444
HpaI	GTTAAC	1 cut(s)	778
HphI	GGTGA	5 cut(s)	203, 260, 751, 902, 980
Hpy166II	GTNNAC	2 cut(s)	778, 1475
Hpy188I	TCNGA	4 cut(s)	361, 376, 1101, 1387
Hpy188III	TCNNGA	8 cut(s)	22, 176, 317, 563, 917, 961, 1234, 1350
Hpy8I	GTNNAC	2 cut(s)	778, 1475
HpyAV	CCTTC	4 cut(s)	328, 545, 1228, 1313
HpyCH4III	ACNGT	5 cut(s)	91, 941, 1105, 1277, 1357
HpyCH4IV	ACGT	5 cut(s)	595, 868, 905, 1300, 1341
HpyF10VI	GCNNNNNNNGC	9 cut(s)	311, 320, 442, 449, 458, 629, 1214, 1262, 1430
HpyF3I	CTNAG	8 cut(s)	31, 360, 690, 1098, 1143, 1158, 1281, 1448
HpySE526I	ACGT	5 cut(s)	595, 868, 905, 1300, 1341
Hsp92I	GRCGYC	1 cut(s)	1341
Hsp92II	CATG	8 cut(s)	83, 761, 848, 964, 1049, 1208, 1369, 1473
HspAI	GCGC	2 cut(s)	443, 1035
KspAI	GTTAAC	1 cut(s)	778
Kzo9I	GATC	5 cut(s)	524, 747, 943, 981, 1461
LguI	GCTCTTC	1 cut(s)	801
LmnI	GCTCC	3 cut(s)	104, 413, 433
Lsp1109I	GCAGC	5 cut(s)	111, 130, 152, 269, 314
LweI	GCATC	7 cut(s)	310, 448, 456, 811, 908, 1069, 1313
MabI	ACCWGGT	1 cut(s)	517
MaeI	CTAG	2 cut(s)	449, 1175
MaeII	ACGT	5 cut(s)	595, 868, 905, 1300, 1341
MaeIII	GTNAC	3 cut(s)	85, 91, 880
MalI	GATC	5 cut(s)	526, 749, 945, 983, 1463
MboI	GATC	5 cut(s)	524, 747, 943, 981, 1461
MboII	GAAGA	8 cut(s)	84, 274, 343, 664, 754, 757, 818, 1195
MfeI	CAATTG	2 cut(s)	6, 837
MhlI	GDGCHC	6 cut(s)	316, 410, 667, 939, 1231, 1477
MluCI	AATT	8 cut(s)	6, 279, 387, 414, 504, 796, 837, 894
MlyI	GAGTC	3 cut(s)	503, 929, 1180
MmeI	TCCRAC	1 cut(s)	1268
MseI	TTAA	8 cut(s)	116, 233, 369, 765, 777, 927, 1395, 1401
MspA1I	CMGCKG	3 cut(s)	143, 305, 787
MspCI	CTTAAG	1 cut(s)	232
MspR9I	CCNGG	4 cut(s)	425, 519, 1010, 1191
MunI	CAATTG	2 cut(s)	6, 837
Mva1269I	GAATGC	1 cut(s)	610
MvaI	CCWGG	4 cut(s)	425, 519, 1010, 1191
MwoI	GCNNNNNNNGC	9 cut(s)	311, 320, 442, 449, 458, 629, 1214, 1262, 1430
NdeII	GATC	5 cut(s)	524, 747, 943, 981, 1461
NheI	GCTAGC	1 cut(s)	1174
NlaIII	CATG	8 cut(s)	83, 761, 848, 964, 1049, 1208, 1369, 1473
NlaIV	GGNNCC	1 cut(s)	106
NsbI	TGCGCA	1 cut(s)	444
NspI	RCATGY	2 cut(s)	848, 1473
PaeI	GCATGC	1 cut(s)	848
PagI	TCATGA	1 cut(s)	960
PciI	ACATGT	1 cut(s)	1469
PciSI	GCTCTTC	1 cut(s)	801
PctI	GAATGC	1 cut(s)	610
PfeI	GAWTC	5 cut(s)	265, 356, 536, 680, 1444
PflFI	GACNNNGTC	1 cut(s)	17
PfoI	TCCNGGA	1 cut(s)	1189
PkrI	GCNGC	6 cut(s)	126, 142, 145, 259, 304, 1435
PleI	GAGTC	3 cut(s)	502, 928, 1180
PpsI	GAGTC	3 cut(s)	502, 928, 1180
Ppu21I	YACGTR	1 cut(s)	1301
PscI	ACATGT	1 cut(s)	1469
PsiI	TTATAA	1 cut(s)	509
Psp124BI	GAGCTC	1 cut(s)	410
Psp1406I	AACGTT	2 cut(s)	868, 905
Psp6I	CCWGG	4 cut(s)	423, 517, 1008, 1189
PspFI	CCCAGC	1 cut(s)	1331
PspGI	CCWGG	4 cut(s)	423, 517, 1008, 1189
PspN4I	GGNNCC	1 cut(s)	106
PspPI	GGNCC	2 cut(s)	35, 1006
PstI	CTGCAG	1 cut(s)	477
PsyI	GACNNNGTC	1 cut(s)	17
PvuII	CAGCTG	3 cut(s)	143, 305, 787
RsaI	GTAC	1 cut(s)	1018
RsaNI	GTAC	1 cut(s)	1017
SacI	GAGCTC	1 cut(s)	410
SapI	GCTCTTC	1 cut(s)	801
SaqAI	TTAA	8 cut(s)	116, 233, 369, 765, 777, 927, 1395, 1401
SatI	GCNGC	6 cut(s)	125, 141, 144, 258, 303, 1434
Sau3AI	GATC	5 cut(s)	524, 747, 943, 981, 1461
Sau96I	GGNCC	2 cut(s)	35, 1006
SchI	GAGTC	3 cut(s)	503, 929, 1180
ScrFI	CCNGG	4 cut(s)	425, 519, 1010, 1191
SduI	GDGCHC	6 cut(s)	316, 410, 667, 939, 1231, 1477
SexAI	ACCWGGT	1 cut(s)	517
SfaNI	GCATC	7 cut(s)	310, 448, 456, 811, 908, 1069, 1313
SfcI	CTRYAG	1 cut(s)	473
SmlI	CTYRAG	2 cut(s)	232, 530
SmoI	CTYRAG	2 cut(s)	232, 530
SphI	GCATGC	1 cut(s)	848
Sse9I	AATT	8 cut(s)	6, 279, 387, 414, 504, 796, 837, 894
SsiI	CCGC	2 cut(s)	221, 1434
SspMI	CTAG	2 cut(s)	449, 1175
SstI	GAGCTC	1 cut(s)	410
StyD4I	CCNGG	4 cut(s)	423, 517, 1008, 1189
StyI	CCWWGG	1 cut(s)	876
TaaI	ACNGT	5 cut(s)	91, 941, 1105, 1277, 1357
TaiI	ACGT	5 cut(s)	598, 871, 908, 1303, 1344
TaqI	TCGA	1 cut(s)	295
TaqII	GACCGA	1 cut(s)	743
TasI	AATT	8 cut(s)	6, 279, 387, 414, 504, 796, 837, 894
TatI	WGTACW	1 cut(s)	1016
TauI	GCSGC	1 cut(s)	1436
TfiI	GAWTC	5 cut(s)	265, 356, 536, 680, 1444
Tru1I	TTAA	8 cut(s)	116, 233, 369, 765, 777, 927, 1395, 1401
Tru9I	TTAA	8 cut(s)	116, 233, 369, 765, 777, 927, 1395, 1401
TscAI	CASTG	4 cut(s)	459, 944, 1282, 1333
TseI	GCWGC	5 cut(s)	124, 140, 143, 257, 302
TspDTI	ATGAA	4 cut(s)	96, 198, 398, 564
TspRI	CASTG	4 cut(s)	459, 944, 1282, 1333
Tth111I	GACNNNGTC	1 cut(s)	17
Vha464I	CTTAAG	1 cut(s)	232
VneI	GTGCAC	1 cut(s)	1473
XapI	RAATTY	1 cut(s)	414
XceI	RCATGY	2 cut(s)	848, 1473
XspI	CTAG	2 cut(s)	449, 1175
ZraI	GACGTC	1 cut(s)	1342

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.