Rmu_sc0005580.1_g000012
ERF Family

ARM repeat superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005580.1
OG0007462
Physical Location & Seq
Forward (+)
81772 .. 91817
10046 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 4278 bp
atggagaacgatcgagttgtgatggagaagacgatgaaaggagtgagtgggctcgacagtcgaggtgcttgggaaattcaaattctcacaaccggtgcaactggccatatttcacttcaacccgttccactctcttttctcaaaaacgactcctccaatcaccgcctctcaatttcgcggttctcactctccgccatggaggagaacgacgaatttgcagtctcggccgaagaaggaagaagcagagtgtttacgcagctaaagtcgtactgcttcgagcttctggagcttgttcaaaaccctaagaagagctcctcatcaatctcttctctgcttcaatttctgcgccagactccttctcatgctctccagcccttcttcgactatacgttgtttccattgctacttctattggatgcgtctgtggattgtaggtccccaaagaagcttggttctgaagaaaaagttgtgagtgctaatatcacgaaagttcctcaaaaagtgagtgacagtgtggctgaaggtgtgcttcagtgtctggaggaactcctcacgaagtgtctcttaggatctgtagatcagatggttgttgtgctcaagaagttgacttatggggctttgctttcaccatctgatgcctcagaagagtttcgtgaaggagttatcaagtgtttcagggcactgcttctgaatttatttccatgctctgataagtcctgcacatgtaatcaaatctttggtctgcctatgcttttagaaaagagagatttcatatctccacccatttgctctccaaagtacgcttcagcatcagatgaatgtttactttcatttctacagtcacaagctgcttctgcagctgttggacactggctatctcttcttctcaaagctgcagacaatgaggctgcacgaggacatctaggcagtgcaaagattcgtgttgaagcgtttctgactcttcgtgtgcttgttgctaaggttggtactgctgacgcattggccttctttttacctggtgttgttagtcagtttgccaaagttttgcatgcctccaaaatgatgaccagtggagctgctggaagtggggatgcaattgatcaagcagttagaggtttggctgagtatctgatgatagttctgctggatgatgctaatttatctggacgtgatatgtcaataactgttacttctgacaaaaagtatgagtctacacaatcttttatggatgagcttcgtcaattgcctactaaggtgcatgctcaaagtaaaattttactggacgattcaagtggtcaaatgattacagctacttccaaatctgagaggaaaactaattctggcaagggtgatgcatcttttcatgtgaatcgtacggatgattggattgagaaaacttctgttcatgtggataaacttttgggcacaacttttcgacatatttgcattcatccagcaaaaaaagtgagacaagggctcctggcttctatacgaggactgttgtcaaagtgcacttatacgctgaggcagagtagacaaatgtttctggagtgcttatgtgttttggttatcgatgactctgaagaggtgtctgcaggtgcacaagaatttcttgaaaatttattctcattggttggaaaatatcaattggaacaagatgttgctcagatttttagcaggctcattgataagcttccaaaagtggtgcttgggagtgaggaatcagttgcactgtcacacgctcagcagttacttgtaatcatgtactattctggtcctcaatttgtggtggatcacatccttcagtctcctgtaacagctactcgtttcttggacatttttgctatttgtatgagtcaaaattcggtattttctggatctcttgataagctaattacatcgaggccatcctcagtaatatacctagactctgtttctgagttgaaagctggaattaaccttaccagtgattgcctgataaatatggctgctacccctcaaaatgcaaagattacggccatccaggagaaagatacaccctatttatcagataatgcccagaagaattatgagcttccacacatgcctccttggtttgtttacaccgggggtcgaaaactataccaatctctttcagggattctcagacttgtgggtctatccttgatgacagataaaaaaaatggacagcatttggcacttgtcactgacattccactgggttacttgcgaaaattagtttctgaggtccgcatgaaggattataatgaaacaagttggcactcatggtataaaagaactggttcaggacagttgctacgccaggcaagcactgctgtatgtattctgaacgagatgatatttggtatatcagatcaagccactgaatatttcagaaggaggtttcagaattcaagaaaaagaaggcaagaatttcaggaatctgatgcagaatttgttggtggccaacctttcaaaaccgaattatccatgttcggtgaatctaggtggaaagttttacaggatgagggtttaaggagtcacttgattgattgtattggtagaattttacatgagtatctatctcatgaagtatgggatcttccaacagaaaatagatcttcgattatacttcatgactatgacgctgaggatattagcataaacttgtttcatgacacagctatgctacagcaggttattattgaaggaataggcatcatcagtatttgccttggaggtgattttgcctctagcggatttcttcatcagtcactttatttgttgctcgagaatctcatttcttcaaactatcatgttagaagcgcttctgatgctgtattgcatattctggctgctacatctggttatccgacagttgggcatctggtattggggaatgcagattatgtgatagattcaatatgcagacaattacgccatttggagattaatccccatgtaccaagtgtgcttgctgcaatgctatcttatattggagtagcttacaagatattgcctttatttgaggagccgatgcgctcagtttctctggagcttgagattcttggcaggcatcagcaccctgaattaacgattccctttttaaaggctgtagcagaaatcgccaaggcatcaaaacgtgaggcttgttcattgccaacccatgcagagtcttacatgttggatgtcaaggctaaaatatctgatacggaaaagaaagatgaggatgacattaatatgtctcatgtggaatcagagaaatgcgagagcattttgtttaagctgaatgattcaaagagatatagacgaacagttggtgctattgccagttcatgtattatggctgcaacccctcttctggcttcagaaaatcaagcagcttgtttggttgccttggatatagttgaggatggtgttacatcattggcgaaagtggaagaggcttatcgccatgagagagatactaaggaagtaattgaagaagtaattcagtcatattcactctatcatcttcaagataatttagatgctgccgatgaaggggctgatgagaacaggttgcttccagcaatgaataaaatatggcctttcctggttgtttgtattcgaaataaaaatccagtggctgttcgaagatgtttatctgtagtaagcaatgtagtgcaaatttgtgggggagatttcttttcacgacgtttccatactgatggctcccacttctggaaacttttatccacatccccattccatagaaaacccaacttaaaagaagaaagaatccctctgcaacttccctacagaagcacatccagttcttcagagagttcaatggctgaaacttctaatctgaaagtccaggttgcggtgctcaacatgatcgctgaattgtcccgaaacaaaaggagtgcttcagcattggacattgtcctcaagaagatcagtggtcttgtggtagggatagcttgcagtggtgttgttggtctacgtgaagcatctgtaaatgcccttcaaggtcttgcgtctgttgatcctgatcttatatggcttcttatggctgatgtttactattctatgaagaaaaaggatataccttcacccccaacaccagatataccagcaatctcccaaattctacctccaccgtcatgtcctaaagagtacctttatgttcagtatggtggtcagagttatggttttgatgttaactttgcttctgtcgaaactgttttcaacaaacttcactctctagcttttgttaatcaaatgtacagttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04150 map04150
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1425

Amino Acids

158.02

Weight (kDa)

6.11

Isoelectric Point (pI)

49.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_TTI1_N PF24173 84 - 234 7.9e-06 TTI1 N-terminal TPR domain
TPR_TTI1_N PF24173 271 - 526 8.7e-20 TTI1 N-terminal TPR domain
TTI1 PF21547 926 - 1016 9.4e-26 TELO2-interacting protein 1
TPR_TTI1_C PF24181 1069 - 1349 7.7e-12 TTI1 C-terminal TPR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2265
AarI CACCTGC 1 cut(s) 1586
AasI GACNNNNNNGTC 1 cut(s) 2154
Acc36I ACCTGC 2 cut(s) 1586, 2686
AccI GTMKAC 3 cut(s) 1211, 1534, 3985
AccII CGCG 1 cut(s) 178
AciI CCGC 6 cut(s) 163, 178, 192, 2251, 2757, 3866
AclWI GGATC 5 cut(s) 577, 1800, 1885, 2607, 4025
AcoI YGGCCR 4 cut(s) 103, 225, 2016, 2464
AcuI CTGAAG 9 cut(s) 477, 515, 540, 789, 1602, 1787, 3351, 3804, 3897
AdeI CACNNNGTG 1 cut(s) 558
AfaI GTAC 8 cut(s) 269, 800, 988, 1375, 1766, 2964, 4163, 4271
AfeI AGCGCT 1 cut(s) 2827
AfiI CCNNNNNNNGG 6 cut(s) 2257, 2879, 3361, 3543, 3723, 3865
AflIII ACRYGT 2 cut(s) 722, 3180
AgeI ACCGGT 1 cut(s) 92
AjiI CACGTC 1 cut(s) 1169
AjnI CCWGG 6 cut(s) 1015, 1479, 2022, 2322, 3594, 3858
AjuI GAANNNNNNNTTGG 2 cut(s) 787, 819
Alw21I GWGCWC 5 cut(s) 314, 597, 1514, 1603, 3873
Alw26I GTCTC 5 cut(s) 226, 566, 1462, 1812, 3249
Alw44I GTGCAC 2 cut(s) 1510, 1599
AlwI GGATC 5 cut(s) 577, 1800, 1885, 2607, 4025
AlwNI CAGNNNCTG 2 cut(s) 538, 3629
Ama87I CYCGRG 1 cut(s) 2789
Aor51HI AGCGCT 1 cut(s) 2827
AoxI GGCC 7 cut(s) 103, 225, 1002, 1904, 2016, 2464, 3587
ApaLI GTGCAC 2 cut(s) 1510, 1599
ArsI GACNNNNNNTTYG 4 cut(s) 204, 236, 724, 756
AseI ATTAAT 2 cut(s) 2952, 3237
AsiGI ACCGGT 1 cut(s) 92
Asp700I GAANNNNTTC 5 cut(s) 648, 951, 2302, 2827, 3489
AspLEI GCGC 3 cut(s) 348, 2828, 3042
AspS9I GGNCC 3 cut(s) 435, 1775, 2248
AsuC2I CCSGG 1 cut(s) 2107
AsuHPI GGTGA 6 cut(s) 152, 618, 1361, 2510, 2753, 4089
AsuII TTCGAA 2 cut(s) 3610, 3634
AvaI CYCGRG 1 cut(s) 2789
AvaII GGWCC 3 cut(s) 435, 1775, 2248
BaeGI GKGCMC 4 cut(s) 682, 1427, 1514, 1603
BaeI ACNNNNGTAYC 2 cut(s) 2561, 2594
BalI TGGCCA 2 cut(s) 105, 2466
BanII GRGCYC 3 cut(s) 54, 314, 1479
BarI GAAGNNNNNNTAC 4 cut(s) 2586, 2618, 3993, 4025
BauI CACGAG 1 cut(s) 912
BbsI GAAGAC 1 cut(s) 35
Bbv12I GWGCWC 5 cut(s) 314, 597, 1514, 1603, 3873
BbvCI CCTCAGC 2 cut(s) 1523, 2649
BccI CCATC 7 cut(s) 16, 577, 637, 1915, 2027, 3407, 3704
BceAI ACGGC 1 cut(s) 2031
BcgI CGANNNNNNTGC 4 cut(s) 197, 231, 1425, 1459
BciT130I CCWGG 6 cut(s) 1017, 1481, 2024, 2324, 3596, 3860
BclI TGATCA 1 cut(s) 1099
BcnI CCSGG 1 cut(s) 2107
BcoDI GTCTC 5 cut(s) 226, 566, 1462, 1812, 3249
BfaI CTAG 5 cut(s) 923, 1925, 2505, 2754, 4250
BfmI CTRYAG 9 cut(s) 573, 836, 855, 894, 1593, 2690, 3114, 3648, 3799
BfoI RGCGCY 1 cut(s) 2829
BfuAI ACCTGC 2 cut(s) 1586, 2686
BglII AGATCT 1 cut(s) 2618
BlpI GCTNAGC 1 cut(s) 1743
Bme1390I CCNGG 7 cut(s) 1017, 1481, 2024, 2107, 2324, 3596, 3860
Bme18I GGWCC 3 cut(s) 435, 1775, 2248
BmeT110I CYCGRG 1 cut(s) 2789
BmgBI CACGTC 1 cut(s) 1169
BmgT120I GGNCC 3 cut(s) 435, 1775, 2248
BmiI GGNNCC 4 cut(s) 437, 1478, 3033, 3715
BmrFI CCNGG 7 cut(s) 1017, 1481, 2024, 2107, 2324, 3596, 3860
BmrI ACTGGG 1 cut(s) 2228
BmuI ACTGGG 1 cut(s) 2228
BoxI GACNNNNGTC 1 cut(s) 1501
BpiI GAAGAC 1 cut(s) 35
BpmI CTGGAG 5 cut(s) 305, 353, 560, 1568, 3074
Bpu10I CCTNAGC 3 cut(s) 978, 1523, 2649
Bpu1102I GCTNAGC 1 cut(s) 1743
Bpu14I TTCGAA 2 cut(s) 3610, 3634
BpuEI CTTGAG 3 cut(s) 581, 3080, 3917
BpuMI CCSGG 1 cut(s) 2107
Bsa29I ATCGAT 1 cut(s) 1572
BsaAI YACGTR 1 cut(s) 3989
BsaBI GATNNNNATC 2 cut(s) 3643, 4035
BsaJI CCNNGG 6 cut(s) 195, 2090, 2106, 2734, 3129, 3396
BsaWI WCCGGW 1 cut(s) 92
BsaXI ACNNNNNCTCC 4 cut(s) 137, 167, 1461, 1491
Bsc4I CCNNNNNNNGG 6 cut(s) 2257, 2879, 3361, 3543, 3723, 3865
Bse118I RCCGGY 1 cut(s) 92
Bse3DI GCAATG 5 cut(s) 398, 2988, 3155, 3579, 3664
Bse8I GATNNNNATC 2 cut(s) 3643, 4035
BseBI CCWGG 6 cut(s) 1017, 1481, 2024, 2324, 3596, 3860
BseCI ATCGAT 1 cut(s) 1572
BseDI CCNNGG 6 cut(s) 195, 2090, 2106, 2734, 3129, 3396
BseJI GATNNNNATC 2 cut(s) 3643, 4035
BseLI CCNNNNNNNGG 6 cut(s) 2257, 2879, 3361, 3543, 3723, 3865
BseMI GCAATG 5 cut(s) 398, 2988, 3155, 3579, 3664
BseRI GAGGAG 5 cut(s) 142, 215, 304, 539, 3044
BseSI GKGCMC 4 cut(s) 682, 1427, 1514, 1603
BseX3I CGGCCG 1 cut(s) 225
BsgI GTGCAG 2 cut(s) 703, 894
Bsh1236I CGCG 1 cut(s) 178
Bsh1285I CGRYCG 2 cut(s) 13, 228
BshFI GGCC 7 cut(s) 105, 227, 1004, 1906, 2018, 2466, 3589
BshTI ACCGGT 1 cut(s) 92
BshVI ATCGAT 1 cut(s) 1572
BsiEI CGRYCG 2 cut(s) 13, 228
BsiHKAI GWGCWC 5 cut(s) 314, 597, 1514, 1603, 3873
BsiHKCI CYCGRG 1 cut(s) 2789
BsiSI CCGG 2 cut(s) 93, 2106
BsiWI CGTACG 1 cut(s) 1373
BslFI GGGAC 2 cut(s) 421, 3877
BslI CCNNNNNNNGG 6 cut(s) 2257, 2879, 3361, 3543, 3723, 3865
BsmAI GTCTC 5 cut(s) 226, 566, 1462, 1812, 3249
BsmFI GGGAC 2 cut(s) 421, 3877
BsmI GAATGC 2 cut(s) 1446, 2905
BsnI GGCC 7 cut(s) 105, 227, 1004, 1906, 2018, 2466, 3589
BsoBI CYCGRG 1 cut(s) 2789
Bsp119I TTCGAA 2 cut(s) 3610, 3634
Bsp1286I GDGCHC 9 cut(s) 54, 314, 597, 682, 1427, 1479, 1514, 1603, 3873
Bsp1407I TGTACA 1 cut(s) 4269
Bsp1720I GCTNAGC 1 cut(s) 1743
Bsp19I CCATGG 1 cut(s) 195
BspACI CCGC 6 cut(s) 163, 178, 192, 2251, 2757, 3866
BspANI GGCC 7 cut(s) 105, 227, 1004, 1906, 2018, 2466, 3589
BspDI ATCGAT 1 cut(s) 1572
BspFNI CGCG 1 cut(s) 178
BspHI TCATGA 3 cut(s) 2587, 2635, 2674
BspLI GGNNCC 4 cut(s) 437, 1478, 3033, 3715
BspMAI CTGCAG 3 cut(s) 859, 898, 1597
BspMI ACCTGC 2 cut(s) 1586, 2686
BspPI GGATC 5 cut(s) 577, 1800, 1885, 2607, 4025
BspQI GCTCTTC 1 cut(s) 302
BspT104I TTCGAA 2 cut(s) 3610, 3634
BsrDI GCAATG 5 cut(s) 398, 2988, 3155, 3579, 3664
BsrFI RCCGGY 1 cut(s) 92
BsrGI TGTACA 1 cut(s) 4269
BssAI RCCGGY 1 cut(s) 92
BssECI CCNNGG 6 cut(s) 195, 2090, 2106, 2734, 3129, 3396
BssSI CACGAG 1 cut(s) 912
BssT1I CCWWGG 5 cut(s) 195, 2090, 2734, 3129, 3396
Bst2BI CACGAG 1 cut(s) 912
Bst2UI CCWGG 6 cut(s) 1017, 1481, 2024, 2324, 3596, 3860
Bst6I CTCTTC 8 cut(s) 302, 331, 639, 885, 966, 1578, 3363, 3435
BstAPI GCANNNNNTGC 1 cut(s) 2333
BstAUI TGTACA 1 cut(s) 4269
BstBAI YACGTR 1 cut(s) 3989
BstBI TTCGAA 2 cut(s) 3610, 3634
BstC8I GCNNGC 7 cut(s) 1050, 1260, 1679, 2329, 2976, 3074, 3967
BstDSI CCRYGG 1 cut(s) 195
BstFNI CGCG 1 cut(s) 178
BstH2I RGCGCY 1 cut(s) 2829
BstHHI GCGC 3 cut(s) 348, 2828, 3042
BstMAI GTCTC 5 cut(s) 226, 566, 1462, 1812, 3249
BstMCI CGRYCG 2 cut(s) 13, 228
BstMWI GCNNNNNNNGC 8 cut(s) 224, 286, 854, 857, 2328, 2333, 2834, 3125
BstNI CCWGG 6 cut(s) 1017, 1481, 2024, 2324, 3596, 3860
BstNSI RCATGY 5 cut(s) 726, 1052, 1262, 2086, 3184
BstPAI GACNNNNGTC 1 cut(s) 1501
BstSCI CCNGG 7 cut(s) 1015, 1479, 2022, 2105, 2322, 3594, 3858
BstSFI CTRYAG 9 cut(s) 573, 836, 855, 894, 1593, 2690, 3114, 3648, 3799
BstSLI GKGCMC 4 cut(s) 682, 1427, 1514, 1603
BstUI CGCG 1 cut(s) 178
BstV2I GAAGAC 1 cut(s) 35
BstX2I RGATCY 4 cut(s) 569, 1877, 2599, 2618
BstXI CCANNNNNNTGG 1 cut(s) 3710
BstYI RGATCY 4 cut(s) 569, 1877, 2599, 2618
BstZI CGGCCG 1 cut(s) 225
Bsu15I ATCGAT 1 cut(s) 1572
BsuRI GGCC 7 cut(s) 105, 227, 1004, 1906, 2018, 2466, 3589
BsuTUI ATCGAT 1 cut(s) 1572
BtgI CCRYGG 1 cut(s) 195
BtrI CACGTC 1 cut(s) 1169
BtsI GCAGTG 4 cut(s) 680, 934, 2331, 3976
BveI ACCTGC 2 cut(s) 1586, 2686
Cac8I GCNNGC 7 cut(s) 1050, 1260, 1679, 2329, 2976, 3074, 3967
CaiI CAGNNNCTG 2 cut(s) 538, 3629
CciI TCATGA 3 cut(s) 2587, 2635, 2674
CfoI GCGC 3 cut(s) 348, 2828, 3042
Cfr10I RCCGGY 1 cut(s) 92
Cfr13I GGNCC 3 cut(s) 435, 1775, 2248
ClaI ATCGAT 1 cut(s) 1572
CseI GACGC 4 cut(s) 408, 1004, 2654, 4011
CsiI ACCWGGT 1 cut(s) 1015
Csp6I GTAC 8 cut(s) 268, 799, 987, 1374, 1765, 2963, 4162, 4270
CspAI ACCGGT 1 cut(s) 92
CviQI GTAC 8 cut(s) 268, 799, 987, 1374, 1765, 2963, 4162, 4270
DraI TTTAAA 1 cut(s) 3108
DraIII CACNNNGTG 1 cut(s) 558
DrdI GACNNNNNNGTC 1 cut(s) 2154
DseDI GACNNNNNNGTC 1 cut(s) 2154
EaeI YGGCCR 4 cut(s) 103, 225, 2016, 2464
EagI CGGCCG 1 cut(s) 225
Eam1104I CTCTTC 8 cut(s) 302, 331, 639, 885, 966, 1578, 3363, 3435
EarI CTCTTC 8 cut(s) 302, 331, 639, 885, 966, 1578, 3363, 3435
EciI GGCGGA 1 cut(s) 181
Ecl136II GAGCTC 1 cut(s) 312
EclXI CGGCCG 1 cut(s) 225
Eco130I CCWWGG 5 cut(s) 195, 2090, 2734, 3129, 3396
Eco24I GRGCYC 3 cut(s) 54, 314, 1479
Eco47I GGWCC 3 cut(s) 435, 1775, 2248
Eco47III AGCGCT 1 cut(s) 2827
Eco52I CGGCCG 1 cut(s) 225
Eco53kI GAGCTC 1 cut(s) 312
Eco57I CTGAAG 9 cut(s) 477, 515, 540, 789, 1602, 1787, 3351, 3804, 3897
Eco88I CYCGRG 1 cut(s) 2789
EcoICRI GAGCTC 1 cut(s) 312
EcoO109I RGGNCCY 1 cut(s) 435
EcoRI GAATTC 1 cut(s) 2410
EcoRII CCWGG 6 cut(s) 1015, 1479, 2022, 2322, 3594, 3858
EcoT14I CCWWGG 5 cut(s) 195, 2090, 2734, 3129, 3396
EcoT22I ATGCAT 1 cut(s) 1357
EcoT38I GRGCYC 3 cut(s) 54, 314, 1479
ErhI CCWWGG 5 cut(s) 195, 2090, 2734, 3129, 3396
FaqI GGGAC 2 cut(s) 421, 3877
FbaI TGATCA 1 cut(s) 1099
FblI GTMKAC 3 cut(s) 1211, 1534, 3985
FriOI GRGCYC 3 cut(s) 54, 314, 1479
FspBI CTAG 5 cut(s) 923, 1925, 2505, 2754, 4250
GlaI GCGC 3 cut(s) 347, 2827, 3041
GsuI CTGGAG 5 cut(s) 305, 353, 560, 1568, 3074
HaeII RGCGCY 1 cut(s) 2829
HaeIII GGCC 7 cut(s) 105, 227, 1004, 1906, 2018, 2466, 3589
HapII CCGG 2 cut(s) 93, 2106
HgaI GACGC 4 cut(s) 408, 1004, 2654, 4011
HhaI GCGC 3 cut(s) 348, 2828, 3042
Hin6I GCGC 3 cut(s) 346, 2826, 3040
HinP1I GCGC 3 cut(s) 346, 2826, 3040
HincII GTYRAC 2 cut(s) 606, 4207
HindII GTYRAC 2 cut(s) 606, 4207
HindIII AAGCTT 2 cut(s) 446, 1691
HpaI GTTAAC 1 cut(s) 4207
HpaII CCGG 2 cut(s) 93, 2106
HphI GGTGA 6 cut(s) 152, 618, 1361, 2510, 2753, 4089
Hpy99I CGWCG 2 cut(s) 212, 3699
HpyCH4IV ACGT 5 cut(s) 389, 1168, 3142, 3697, 3988
HpyF10VI GCNNNNNNNGC 8 cut(s) 224, 286, 854, 857, 2328, 2333, 2834, 3125
HpySE526I ACGT 5 cut(s) 389, 1168, 3142, 3697, 3988
HspAI GCGC 3 cut(s) 346, 2826, 3040
Ksp22I TGATCA 1 cut(s) 1099
KspAI GTTAAC 1 cut(s) 4207
LguI GCTCTTC 1 cut(s) 302
LmnI GCTCC 7 cut(s) 286, 317, 1073, 1482, 3031, 3055, 3719
MabI ACCWGGT 1 cut(s) 1015
MaeI CTAG 5 cut(s) 923, 1925, 2505, 2754, 4250
MaeII ACGT 5 cut(s) 389, 1168, 3142, 3697, 3988
MfeI CAATTG 3 cut(s) 1095, 1241, 1646
MflI RGATCY 4 cut(s) 569, 1877, 2599, 2618
MhlI GDGCHC 9 cut(s) 54, 314, 597, 682, 1427, 1479, 1514, 1603, 3873
MlsI TGGCCA 2 cut(s) 105, 2466
MluNI TGGCCA 2 cut(s) 105, 2466
MlyI GAGTC 9 cut(s) 143, 346, 952, 1217, 1571, 1864, 1922, 2548, 3182
MmeI TCCRAC 5 cut(s) 844, 1615, 2630, 2897, 3165
Mox20I TGGCCA 2 cut(s) 105, 2466
Mph1103I ATGCAT 1 cut(s) 1357
MroXI GAANNNNTTC 5 cut(s) 648, 951, 2302, 2827, 3489
MscI TGGCCA 2 cut(s) 105, 2466
MslI CAYNNNNRTG 5 cut(s) 2640, 2684, 3239, 3708, 4147
Msp20I TGGCCA 2 cut(s) 105, 2466
MspA1I CMGCKG 1 cut(s) 860
MspI CCGG 2 cut(s) 93, 2106
MspR9I CCNGG 7 cut(s) 1017, 1481, 2024, 2107, 2324, 3596, 3860
MunI CAATTG 3 cut(s) 1095, 1241, 1646
Mva1269I GAATGC 2 cut(s) 1446, 2905
MvaI CCWGG 6 cut(s) 1017, 1481, 2024, 2324, 3596, 3860
MvnI CGCG 1 cut(s) 178
MwoI GCNNNNNNNGC 8 cut(s) 224, 286, 854, 857, 2328, 2333, 2834, 3125
NciI CCSGG 1 cut(s) 2107
NcoI CCATGG 1 cut(s) 195
NlaIV GGNNCC 4 cut(s) 437, 1478, 3033, 3715
NmeAIII GCCGAG 1 cut(s) 203
NmuCI GTSAC 6 cut(s) 506, 840, 1734, 2203, 2540, 2772
NsiI ATGCAT 1 cut(s) 1357
NspI RCATGY 5 cut(s) 726, 1052, 1262, 2086, 3184
NspV TTCGAA 2 cut(s) 3610, 3634
PaeI GCATGC 2 cut(s) 1052, 1262
PaeR7I CTCGAG 1 cut(s) 2789
PagI TCATGA 3 cut(s) 2587, 2635, 2674
PaqCI CACCTGC 1 cut(s) 1586
PciI ACATGT 2 cut(s) 722, 3180
PciSI GCTCTTC 1 cut(s) 302
PctI GAATGC 2 cut(s) 1446, 2905
PdmI GAANNNNTTC 5 cut(s) 648, 951, 2302, 2827, 3489
Pfl23II CGTACG 1 cut(s) 1373
PflFI GACNNNGTC 1 cut(s) 3926
PfoI TCCNGGA 1 cut(s) 2022
PinAI ACCGGT 1 cut(s) 92
Ple19I CGATCG 1 cut(s) 13
PleI GAGTC 9 cut(s) 143, 346, 952, 1216, 1571, 1863, 1922, 2547, 3181
PpsI GAGTC 9 cut(s) 143, 346, 952, 1216, 1571, 1863, 1922, 2547, 3181
Ppu21I YACGTR 1 cut(s) 3989
PpuMI RGGWCCY 1 cut(s) 435
PscI ACATGT 2 cut(s) 722, 3180
PshAI GACNNNNGTC 1 cut(s) 1501
PshBI ATTAAT 2 cut(s) 2952, 3237
PsiI TTATAA 1 cut(s) 2265
Psp124BI GAGCTC 1 cut(s) 314
Psp5II RGGWCCY 1 cut(s) 435
Psp6I CCWGG 6 cut(s) 1015, 1479, 2022, 2322, 3594, 3858
PspGI CCWGG 6 cut(s) 1015, 1479, 2022, 2322, 3594, 3858
PspLI CGTACG 1 cut(s) 1373
PspN4I GGNNCC 4 cut(s) 437, 1478, 3033, 3715
PspPI GGNCC 3 cut(s) 435, 1775, 2248
PspPPI RGGWCCY 1 cut(s) 435
PstI CTGCAG 3 cut(s) 859, 898, 1597
PstNI CAGNNNCTG 2 cut(s) 538, 3629
PsuI RGATCY 4 cut(s) 569, 1877, 2599, 2618
PsyI GACNNNGTC 1 cut(s) 3926
PvuI CGATCG 1 cut(s) 13
PvuII CAGCTG 1 cut(s) 860
RsaI GTAC 8 cut(s) 269, 800, 988, 1375, 1766, 2964, 4163, 4271
RsaNI GTAC 8 cut(s) 268, 799, 987, 1374, 1765, 2963, 4162, 4270
RseI CAYNNNNRTG 5 cut(s) 2640, 2684, 3239, 3708, 4147
SacI GAGCTC 1 cut(s) 314
SapI GCTCTTC 1 cut(s) 302
Sau96I GGNCC 3 cut(s) 435, 1775, 2248
SchI GAGTC 9 cut(s) 143, 346, 952, 1217, 1571, 1864, 1922, 2548, 3182
ScrFI CCNGG 7 cut(s) 1017, 1481, 2024, 2107, 2324, 3596, 3860
SduI GDGCHC 9 cut(s) 54, 314, 597, 682, 1427, 1479, 1514, 1603, 3873
SexAI ACCWGGT 1 cut(s) 1015
SfcI CTRYAG 9 cut(s) 573, 836, 855, 894, 1593, 2690, 3114, 3648, 3799
Sfr274I CTCGAG 1 cut(s) 2789
SfuI TTCGAA 2 cut(s) 3610, 3634
SinI GGWCC 3 cut(s) 435, 1775, 2248
SlaI CTCGAG 1 cut(s) 2789
SmiMI CAYNNNNRTG 5 cut(s) 2640, 2684, 3239, 3708, 4147
SmlI CTYRAG 4 cut(s) 596, 2789, 3059, 3932
SmoI CTYRAG 4 cut(s) 596, 2789, 3059, 3932
SphI GCATGC 2 cut(s) 1052, 1262
SsiI CCGC 6 cut(s) 163, 178, 192, 2251, 2757, 3866
SspI AATATT 1 cut(s) 2390
SspMI CTAG 5 cut(s) 923, 1925, 2505, 2754, 4250
SstI GAGCTC 1 cut(s) 314
StyD4I CCNGG 7 cut(s) 1015, 1479, 2022, 2105, 2322, 3594, 3858
StyI CCWWGG 5 cut(s) 195, 2090, 2734, 3129, 3396
TaiI ACGT 5 cut(s) 392, 1171, 3145, 3700, 3991
TatI WGTACW 2 cut(s) 1764, 4269
TseFI GTSAC 6 cut(s) 506, 840, 1734, 2203, 2540, 2772
Tsp45I GTSAC 6 cut(s) 506, 840, 1734, 2203, 2540, 2772
TspGWI ACGGA 2 cut(s) 1391, 3227
Tth111I GACNNNGTC 1 cut(s) 3926
VneI GTGCAC 2 cut(s) 1510, 1599
VpaK11BI GGWCC 3 cut(s) 435, 1775, 2248
VspI ATTAAT 2 cut(s) 2952, 3237
XceI RCATGY 5 cut(s) 726, 1052, 1262, 2086, 3184
XhoI CTCGAG 1 cut(s) 2789
XmiI GTMKAC 3 cut(s) 1211, 1534, 3985
XmnI GAANNNNTTC 5 cut(s) 648, 951, 2302, 2827, 3489
XspI CTAG 5 cut(s) 923, 1925, 2505, 2754, 4250
Zsp2I ATGCAT 1 cut(s) 1357
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.