Nuclear pore complex protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000020630 |
| rosa_multiflora | Rmu_sc0005885.1_g000003 Rmu_sc0019526.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00095760 |
| rosa_samantha | Rh2AG494100 Rh2BG506400 Rh2CG480400 Rh2DG517500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 389 |
| AciI | CCGC | 1 cut(s) | 45 |
| AcsI | RAATTY | 2 cut(s) | 183, 372 |
| AfaI | GTAC | 1 cut(s) | 34 |
| AfeI | AGCGCT | 1 cut(s) | 96 |
| AgsI | TTSAA | 5 cut(s) | 88, 182, 218, 323, 334 |
| AluBI | AGCT | 3 cut(s) | 142, 169, 317 |
| AluI | AGCT | 3 cut(s) | 142, 169, 317 |
| Alw21I | GWGCWC | 1 cut(s) | 319 |
| Alw26I | GTCTC | 1 cut(s) | 63 |
| Aor51HI | AGCGCT | 1 cut(s) | 96 |
| ApoI | RAATTY | 2 cut(s) | 183, 372 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 65, 97 |
| AspLEI | GCGC | 3 cut(s) | 53, 78, 97 |
| BanII | GRGCYC | 1 cut(s) | 319 |
| Bbv12I | GWGCWC | 1 cut(s) | 319 |
| BccI | CCATC | 3 cut(s) | 76, 154, 314 |
| BceAI | ACGGC | 1 cut(s) | 362 |
| BcoDI | GTCTC | 1 cut(s) | 63 |
| BfmI | CTRYAG | 1 cut(s) | 458 |
| BfoI | RGCGCY | 3 cut(s) | 54, 79, 98 |
| BmsI | GCATC | 2 cut(s) | 181, 256 |
| Bse118I | RCCGGY | 1 cut(s) | 78 |
| BseGI | GGATG | 1 cut(s) | 178 |
| BseMII | CTCAG | 1 cut(s) | 5 |
| BseRI | GAGGAG | 2 cut(s) | 327, 379 |
| BsgI | GTGCAG | 1 cut(s) | 183 |
| Bsh1285I | CGRYCG | 1 cut(s) | 83 |
| BsiEI | CGRYCG | 1 cut(s) | 83 |
| BsiHKAI | GWGCWC | 1 cut(s) | 319 |
| BsiSI | CCGG | 1 cut(s) | 79 |
| BslFI | GGGAC | 1 cut(s) | 109 |
| BsmAI | GTCTC | 1 cut(s) | 63 |
| BsmBI | CGTCTC | 1 cut(s) | 63 |
| BsmFI | GGGAC | 1 cut(s) | 109 |
| Bsp1286I | GDGCHC | 1 cut(s) | 319 |
| BspACI | CCGC | 1 cut(s) | 45 |
| BspCNI | CTCAG | 1 cut(s) | 6 |
| BspQI | GCTCTTC | 1 cut(s) | 324 |
| BsrFI | RCCGGY | 1 cut(s) | 78 |
| BssAI | RCCGGY | 1 cut(s) | 78 |
| BssNAI | GTATAC | 1 cut(s) | 390 |
| Bst1107I | GTATAC | 1 cut(s) | 390 |
| Bst6I | CTCTTC | 2 cut(s) | 324, 419 |
| BstC8I | GCNNGC | 1 cut(s) | 339 |
| BstDEI | CTNAG | 1 cut(s) | 14 |
| BstF5I | GGATG | 1 cut(s) | 178 |
| BstH2I | RGCGCY | 3 cut(s) | 54, 79, 98 |
| BstHHI | GCGC | 3 cut(s) | 53, 78, 97 |
| BstMAI | GTCTC | 1 cut(s) | 63 |
| BstMCI | CGRYCG | 1 cut(s) | 83 |
| BstNSI | RCATGY | 1 cut(s) | 341 |
| BstSFI | CTRYAG | 1 cut(s) | 458 |
| BstZ17I | GTATAC | 1 cut(s) | 390 |
| BtsCI | GGATG | 1 cut(s) | 178 |
| Cac8I | GCNNGC | 1 cut(s) | 339 |
| CfoI | GCGC | 3 cut(s) | 53, 78, 97 |
| Cfr10I | RCCGGY | 1 cut(s) | 78 |
| Csp6I | GTAC | 1 cut(s) | 33 |
| CviAII | CATG | 2 cut(s) | 338, 443 |
| CviJI | RGCY | 5 cut(s) | 142, 169, 302, 317, 349 |
| CviKI_1 | RGCY | 5 cut(s) | 142, 169, 302, 317, 349 |
| CviQI | GTAC | 1 cut(s) | 33 |
| DdeI | CTNAG | 1 cut(s) | 14 |
| Eam1104I | CTCTTC | 2 cut(s) | 324, 419 |
| EarI | CTCTTC | 2 cut(s) | 324, 419 |
| Ecl136II | GAGCTC | 1 cut(s) | 317 |
| Eco24I | GRGCYC | 1 cut(s) | 319 |
| Eco47III | AGCGCT | 1 cut(s) | 96 |
| Eco53kI | GAGCTC | 1 cut(s) | 317 |
| EcoICRI | GAGCTC | 1 cut(s) | 317 |
| EcoT38I | GRGCYC | 1 cut(s) | 319 |
| Esp3I | CGTCTC | 1 cut(s) | 63 |
| FaeI | CATG | 2 cut(s) | 341, 446 |
| FaqI | GGGAC | 1 cut(s) | 109 |
| FatI | CATG | 2 cut(s) | 337, 442 |
| FblI | GTMKAC | 1 cut(s) | 389 |
| FokI | GGATG | 1 cut(s) | 185 |
| FriOI | GRGCYC | 1 cut(s) | 319 |
| GlaI | GCGC | 3 cut(s) | 52, 77, 96 |
| HaeII | RGCGCY | 3 cut(s) | 54, 79, 98 |
| HapII | CCGG | 1 cut(s) | 79 |
| HhaI | GCGC | 3 cut(s) | 53, 78, 97 |
| Hin1II | CATG | 2 cut(s) | 341, 446 |
| Hin6I | GCGC | 3 cut(s) | 51, 76, 95 |
| HinP1I | GCGC | 3 cut(s) | 51, 76, 95 |
| HindIII | AAGCTT | 1 cut(s) | 140 |
| HinfI | GANTC | 3 cut(s) | 104, 152, 277 |
| HpaII | CCGG | 1 cut(s) | 79 |
| Hpy166II | GTNNAC | 1 cut(s) | 390 |
| Hpy188I | TCNGA | 2 cut(s) | 151, 311 |
| Hpy188III | TCNNGA | 4 cut(s) | 188, 293, 323, 377 |
| Hpy8I | GTNNAC | 1 cut(s) | 390 |
| HpyAV | CCTTC | 1 cut(s) | 123 |
| HpyCH4IV | ACGT | 1 cut(s) | 35 |
| HpyCH4V | TGCA | 5 cut(s) | 164, 194, 247, 287, 341 |
| HpyF3I | CTNAG | 1 cut(s) | 14 |
| HpySE526I | ACGT | 1 cut(s) | 35 |
| Hsp92II | CATG | 2 cut(s) | 341, 446 |
| HspAI | GCGC | 3 cut(s) | 51, 76, 95 |
| LguI | GCTCTTC | 1 cut(s) | 324 |
| LmnI | GCTCC | 1 cut(s) | 314 |
| LpnPI | CCDG | 3 cut(s) | 92, 155, 362 |
| LweI | GCATC | 2 cut(s) | 181, 256 |
| MaeII | ACGT | 1 cut(s) | 35 |
| MaeIII | GTNAC | 1 cut(s) | 256 |
| MboII | GAAGA | 3 cut(s) | 311, 392, 406 |
| MhlI | GDGCHC | 1 cut(s) | 319 |
| MluCI | AATT | 4 cut(s) | 177, 183, 242, 372 |
| MlyI | GAGTC | 2 cut(s) | 113, 146 |
| MnlI | CCTC | 6 cut(s) | 41, 137, 202, 305, 357, 360 |
| MseI | TTAA | 3 cut(s) | 138, 198, 357 |
| MslI | CAYNNNNRTG | 2 cut(s) | 218, 252 |
| MspI | CCGG | 1 cut(s) | 79 |
| NlaIII | CATG | 2 cut(s) | 341, 446 |
| NmuCI | GTSAC | 1 cut(s) | 256 |
| NspI | RCATGY | 1 cut(s) | 341 |
| PaeI | GCATGC | 1 cut(s) | 341 |
| PciSI | GCTCTTC | 1 cut(s) | 324 |
| PfeI | GAWTC | 1 cut(s) | 277 |
| PleI | GAGTC | 2 cut(s) | 112, 146 |
| PpsI | GAGTC | 2 cut(s) | 112, 146 |
| Psp124BI | GAGCTC | 1 cut(s) | 319 |
| RsaI | GTAC | 1 cut(s) | 34 |
| RsaNI | GTAC | 1 cut(s) | 33 |
| RseI | CAYNNNNRTG | 2 cut(s) | 218, 252 |
| SacI | GAGCTC | 1 cut(s) | 319 |
| SapI | GCTCTTC | 1 cut(s) | 324 |
| SaqAI | TTAA | 3 cut(s) | 138, 198, 357 |
| SchI | GAGTC | 2 cut(s) | 113, 146 |
| SduI | GDGCHC | 1 cut(s) | 319 |
| SetI | ASST | 4 cut(s) | 38, 144, 171, 319 |
| SfaNI | GCATC | 2 cut(s) | 181, 256 |
| SfcI | CTRYAG | 1 cut(s) | 458 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 218, 252 |
| SphI | GCATGC | 1 cut(s) | 341 |
| Sse9I | AATT | 4 cut(s) | 177, 183, 242, 372 |
| SsiI | CCGC | 1 cut(s) | 45 |
| SstI | GAGCTC | 1 cut(s) | 319 |
| TaiI | ACGT | 1 cut(s) | 38 |
| TaqI | TCGA | 1 cut(s) | 71 |
| TasI | AATT | 4 cut(s) | 177, 183, 242, 372 |
| TfiI | GAWTC | 1 cut(s) | 277 |
| Tru1I | TTAA | 3 cut(s) | 138, 198, 357 |
| Tru9I | TTAA | 3 cut(s) | 138, 198, 357 |
| TseFI | GTSAC | 1 cut(s) | 256 |
| Tsp45I | GTSAC | 1 cut(s) | 256 |
| TspDTI | ATGAA | 3 cut(s) | 105, 189, 255 |
| XapI | RAATTY | 2 cut(s) | 183, 372 |
| XceI | RCATGY | 1 cut(s) | 341 |
| XmiI | GTMKAC | 1 cut(s) | 389 |