Nuclear pore complex protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000020630 |
| rosa_multiflora | Rmu_sc0005885.1_g000003 Rmu_sc0019526.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00095760 |
| rosa_samantha | Rh2AG494100 Rh2BG506400 Rh2CG480400 Rh2DG517500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 183 |
| AfeI | AGCGCT | 1 cut(s) | 96 |
| AgsI | TTSAA | 3 cut(s) | 88, 182, 218 |
| AluBI | AGCT | 2 cut(s) | 53, 169 |
| AluI | AGCT | 2 cut(s) | 53, 169 |
| Alw26I | GTCTC | 2 cut(s) | 26, 63 |
| Aor51HI | AGCGCT | 1 cut(s) | 96 |
| ApoI | RAATTY | 1 cut(s) | 183 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 65, 97 |
| AspLEI | GCGC | 2 cut(s) | 78, 97 |
| BauI | CACGAG | 1 cut(s) | 159 |
| BccI | CCATC | 2 cut(s) | 76, 154 |
| BcoDI | GTCTC | 2 cut(s) | 26, 63 |
| BfoI | RGCGCY | 2 cut(s) | 79, 98 |
| BmsI | GCATC | 2 cut(s) | 181, 256 |
| Bse118I | RCCGGY | 1 cut(s) | 78 |
| BseGI | GGATG | 1 cut(s) | 178 |
| BseMII | CTCAG | 1 cut(s) | 5 |
| BseRI | GAGGAG | 1 cut(s) | 63 |
| BsgI | GTGCAG | 1 cut(s) | 183 |
| Bsh1285I | CGRYCG | 1 cut(s) | 83 |
| BsiEI | CGRYCG | 1 cut(s) | 83 |
| BsiSI | CCGG | 1 cut(s) | 79 |
| BslFI | GGGAC | 1 cut(s) | 109 |
| BsmAI | GTCTC | 2 cut(s) | 26, 63 |
| BsmBI | CGTCTC | 2 cut(s) | 26, 63 |
| BsmFI | GGGAC | 1 cut(s) | 109 |
| BspCNI | CTCAG | 1 cut(s) | 6 |
| BsrFI | RCCGGY | 1 cut(s) | 78 |
| BssAI | RCCGGY | 1 cut(s) | 78 |
| BssSI | CACGAG | 1 cut(s) | 159 |
| Bst2BI | CACGAG | 1 cut(s) | 159 |
| BstDEI | CTNAG | 1 cut(s) | 14 |
| BstF5I | GGATG | 1 cut(s) | 178 |
| BstH2I | RGCGCY | 2 cut(s) | 79, 98 |
| BstHHI | GCGC | 2 cut(s) | 78, 97 |
| BstMAI | GTCTC | 2 cut(s) | 26, 63 |
| BstMCI | CGRYCG | 1 cut(s) | 83 |
| BtsCI | GGATG | 1 cut(s) | 178 |
| CfoI | GCGC | 2 cut(s) | 78, 97 |
| Cfr10I | RCCGGY | 1 cut(s) | 78 |
| CviAII | CATG | 1 cut(s) | 313 |
| CviJI | RGCY | 3 cut(s) | 53, 142, 169 |
| CviKI_1 | RGCY | 3 cut(s) | 53, 142, 169 |
| DdeI | CTNAG | 1 cut(s) | 14 |
| Eco47III | AGCGCT | 1 cut(s) | 96 |
| Esp3I | CGTCTC | 2 cut(s) | 26, 63 |
| FaeI | CATG | 1 cut(s) | 316 |
| FaiI | YATR | 7 cut(s) | 110, 233, 301, 314, 318, 320, 328 |
| FaqI | GGGAC | 1 cut(s) | 109 |
| FatI | CATG | 1 cut(s) | 312 |
| FokI | GGATG | 1 cut(s) | 185 |
| GlaI | GCGC | 2 cut(s) | 77, 96 |
| HaeII | RGCGCY | 2 cut(s) | 79, 98 |
| HapII | CCGG | 1 cut(s) | 79 |
| HhaI | GCGC | 2 cut(s) | 78, 97 |
| Hin1II | CATG | 1 cut(s) | 316 |
| Hin6I | GCGC | 2 cut(s) | 76, 95 |
| HinP1I | GCGC | 2 cut(s) | 76, 95 |
| HinfI | GANTC | 3 cut(s) | 104, 152, 277 |
| HpaII | CCGG | 1 cut(s) | 79 |
| Hpy188I | TCNGA | 2 cut(s) | 31, 151 |
| Hpy188III | TCNNGA | 2 cut(s) | 188, 293 |
| HpyAV | CCTTC | 1 cut(s) | 123 |
| HpyCH4IV | ACGT | 1 cut(s) | 35 |
| HpyCH4V | TGCA | 4 cut(s) | 164, 194, 247, 287 |
| HpyF3I | CTNAG | 1 cut(s) | 14 |
| HpySE526I | ACGT | 1 cut(s) | 35 |
| Hsp92II | CATG | 1 cut(s) | 316 |
| HspAI | GCGC | 2 cut(s) | 76, 95 |
| LmnI | GCTCC | 1 cut(s) | 50 |
| LpnPI | CCDG | 2 cut(s) | 92, 155 |
| LweI | GCATC | 2 cut(s) | 181, 256 |
| MaeII | ACGT | 1 cut(s) | 35 |
| MaeIII | GTNAC | 1 cut(s) | 256 |
| MluCI | AATT | 2 cut(s) | 177, 183 |
| MlyI | GAGTC | 2 cut(s) | 113, 146 |
| MnlI | CCTC | 5 cut(s) | 41, 137, 153, 202, 289 |
| MseI | TTAA | 3 cut(s) | 99, 138, 198 |
| MslI | CAYNNNNRTG | 2 cut(s) | 218, 252 |
| MspI | CCGG | 1 cut(s) | 79 |
| NlaIII | CATG | 1 cut(s) | 316 |
| NmuCI | GTSAC | 1 cut(s) | 256 |
| PfeI | GAWTC | 1 cut(s) | 277 |
| PleI | GAGTC | 2 cut(s) | 112, 146 |
| PpsI | GAGTC | 2 cut(s) | 112, 146 |
| RseI | CAYNNNNRTG | 2 cut(s) | 218, 252 |
| SaqAI | TTAA | 3 cut(s) | 99, 138, 198 |
| SchI | GAGTC | 2 cut(s) | 113, 146 |
| SetI | ASST | 4 cut(s) | 38, 55, 171, 300 |
| SfaNI | GCATC | 2 cut(s) | 181, 256 |
| SgeI | CNNG | 9 cut(s) | 91, 115, 142, 171, 173, 182, 200, 305, 325 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 218, 252 |
| Sse9I | AATT | 2 cut(s) | 177, 183 |
| TaiI | ACGT | 1 cut(s) | 38 |
| TaqI | TCGA | 1 cut(s) | 71 |
| TasI | AATT | 2 cut(s) | 177, 183 |
| TfiI | GAWTC | 1 cut(s) | 277 |
| Tru1I | TTAA | 3 cut(s) | 99, 138, 198 |
| Tru9I | TTAA | 3 cut(s) | 99, 138, 198 |
| TseFI | GTSAC | 1 cut(s) | 256 |
| Tsp45I | GTSAC | 1 cut(s) | 256 |
| TspDTI | ATGAA | 5 cut(s) | 105, 105, 189, 255, 315 |
| TspGWI | ACGGA | 1 cut(s) | 260 |
| XapI | RAATTY | 1 cut(s) | 183 |