Nuclear pore complex protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000020630 |
| rosa_multiflora | Rmu_sc0005885.1_g000003 Rmu_sc0019526.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00095760 |
| rosa_samantha | Rh2AG494100 Rh2BG506400 Rh2CG480400 Rh2DG517500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 45 |
| AcsI | RAATTY | 1 cut(s) | 291 |
| AfeI | AGCGCT | 1 cut(s) | 96 |
| AgsI | TTSAA | 2 cut(s) | 88, 253 |
| AluBI | AGCT | 2 cut(s) | 134, 236 |
| AluI | AGCT | 2 cut(s) | 134, 236 |
| Alw21I | GWGCWC | 1 cut(s) | 238 |
| Alw26I | GTCTC | 1 cut(s) | 63 |
| Aor51HI | AGCGCT | 1 cut(s) | 96 |
| ApoI | RAATTY | 1 cut(s) | 291 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 65, 97 |
| AspLEI | GCGC | 2 cut(s) | 78, 97 |
| BanII | GRGCYC | 1 cut(s) | 238 |
| Bbv12I | GWGCWC | 1 cut(s) | 238 |
| BccI | CCATC | 2 cut(s) | 76, 233 |
| BceAI | ACGGC | 1 cut(s) | 281 |
| BcoDI | GTCTC | 1 cut(s) | 63 |
| BfoI | RGCGCY | 2 cut(s) | 79, 98 |
| BpuEI | CTTGAG | 1 cut(s) | 225 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 43, 73 |
| Bse118I | RCCGGY | 1 cut(s) | 78 |
| BseRI | GAGGAG | 2 cut(s) | 228, 298 |
| Bsh1285I | CGRYCG | 1 cut(s) | 83 |
| BsiEI | CGRYCG | 1 cut(s) | 83 |
| BsiHKAI | GWGCWC | 1 cut(s) | 238 |
| BsiSI | CCGG | 1 cut(s) | 79 |
| BslFI | GGGAC | 1 cut(s) | 109 |
| BsmAI | GTCTC | 1 cut(s) | 63 |
| BsmBI | CGTCTC | 1 cut(s) | 63 |
| BsmFI | GGGAC | 1 cut(s) | 109 |
| Bsp1286I | GDGCHC | 1 cut(s) | 238 |
| BspACI | CCGC | 1 cut(s) | 45 |
| BspQI | GCTCTTC | 1 cut(s) | 226 |
| BsrFI | RCCGGY | 1 cut(s) | 78 |
| BssAI | RCCGGY | 1 cut(s) | 78 |
| Bst4CI | ACNGT | 1 cut(s) | 142 |
| Bst6I | CTCTTC | 1 cut(s) | 226 |
| BstC8I | GCNNGC | 1 cut(s) | 258 |
| BstDEI | CTNAG | 1 cut(s) | 130 |
| BstH2I | RGCGCY | 2 cut(s) | 79, 98 |
| BstHHI | GCGC | 2 cut(s) | 78, 97 |
| BstMAI | GTCTC | 1 cut(s) | 63 |
| BstMCI | CGRYCG | 1 cut(s) | 83 |
| BstNSI | RCATGY | 1 cut(s) | 260 |
| Cac8I | GCNNGC | 1 cut(s) | 258 |
| CfoI | GCGC | 2 cut(s) | 78, 97 |
| Cfr10I | RCCGGY | 1 cut(s) | 78 |
| CviAII | CATG | 1 cut(s) | 257 |
| CviJI | RGCY | 4 cut(s) | 134, 221, 236, 268 |
| CviKI_1 | RGCY | 4 cut(s) | 134, 221, 236, 268 |
| DdeI | CTNAG | 1 cut(s) | 130 |
| Eam1104I | CTCTTC | 1 cut(s) | 226 |
| EarI | CTCTTC | 1 cut(s) | 226 |
| Ecl136II | GAGCTC | 1 cut(s) | 236 |
| Eco24I | GRGCYC | 1 cut(s) | 238 |
| Eco47III | AGCGCT | 1 cut(s) | 96 |
| Eco53kI | GAGCTC | 1 cut(s) | 236 |
| EcoICRI | GAGCTC | 1 cut(s) | 236 |
| EcoT38I | GRGCYC | 1 cut(s) | 238 |
| Esp3I | CGTCTC | 1 cut(s) | 63 |
| FaeI | CATG | 1 cut(s) | 260 |
| FaiI | YATR | 2 cut(s) | 152, 258 |
| FaqI | GGGAC | 1 cut(s) | 109 |
| FatI | CATG | 1 cut(s) | 256 |
| FriOI | GRGCYC | 1 cut(s) | 238 |
| GlaI | GCGC | 2 cut(s) | 77, 96 |
| HaeII | RGCGCY | 2 cut(s) | 79, 98 |
| HapII | CCGG | 1 cut(s) | 79 |
| HhaI | GCGC | 2 cut(s) | 78, 97 |
| Hin1II | CATG | 1 cut(s) | 260 |
| Hin6I | GCGC | 2 cut(s) | 76, 95 |
| HinP1I | GCGC | 2 cut(s) | 76, 95 |
| HinfI | GANTC | 2 cut(s) | 104, 196 |
| HpaII | CCGG | 1 cut(s) | 79 |
| Hpy188I | TCNGA | 1 cut(s) | 230 |
| Hpy188III | TCNNGA | 3 cut(s) | 212, 242, 296 |
| Hpy99I | CGWCG | 1 cut(s) | 37 |
| HpyAV | CCTTC | 1 cut(s) | 123 |
| HpyCH4III | ACNGT | 1 cut(s) | 142 |
| HpyCH4IV | ACGT | 1 cut(s) | 35 |
| HpyCH4V | TGCA | 2 cut(s) | 206, 260 |
| HpyF3I | CTNAG | 1 cut(s) | 130 |
| HpySE526I | ACGT | 1 cut(s) | 35 |
| Hsp92II | CATG | 1 cut(s) | 260 |
| HspAI | GCGC | 2 cut(s) | 76, 95 |
| LguI | GCTCTTC | 1 cut(s) | 226 |
| LmnI | GCTCC | 1 cut(s) | 241 |
| LpnPI | CCDG | 2 cut(s) | 92, 281 |
| MaeII | ACGT | 1 cut(s) | 35 |
| MaeIII | GTNAC | 1 cut(s) | 175 |
| MboII | GAAGA | 2 cut(s) | 243, 311 |
| MhlI | GDGCHC | 1 cut(s) | 238 |
| MluCI | AATT | 1 cut(s) | 291 |
| MlyI | GAGTC | 1 cut(s) | 113 |
| MnlI | CCTC | 5 cut(s) | 41, 137, 249, 276, 279 |
| MseI | TTAA | 2 cut(s) | 276, 310 |
| MslI | CAYNNNNRTG | 1 cut(s) | 171 |
| MspI | CCGG | 1 cut(s) | 79 |
| NlaIII | CATG | 1 cut(s) | 260 |
| NmuCI | GTSAC | 1 cut(s) | 175 |
| NspI | RCATGY | 1 cut(s) | 260 |
| PaeI | GCATGC | 1 cut(s) | 260 |
| PciSI | GCTCTTC | 1 cut(s) | 226 |
| PfeI | GAWTC | 1 cut(s) | 196 |
| PleI | GAGTC | 1 cut(s) | 112 |
| PpsI | GAGTC | 1 cut(s) | 112 |
| Psp124BI | GAGCTC | 1 cut(s) | 238 |
| RseI | CAYNNNNRTG | 1 cut(s) | 171 |
| SacI | GAGCTC | 1 cut(s) | 238 |
| SapI | GCTCTTC | 1 cut(s) | 226 |
| SaqAI | TTAA | 2 cut(s) | 276, 310 |
| SchI | GAGTC | 1 cut(s) | 113 |
| SduI | GDGCHC | 1 cut(s) | 238 |
| SetI | ASST | 3 cut(s) | 38, 136, 238 |
| SgeI | CNNG | 5 cut(s) | 91, 224, 254, 269, 308 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 171 |
| SmlI | CTYRAG | 1 cut(s) | 240 |
| SmoI | CTYRAG | 1 cut(s) | 240 |
| SphI | GCATGC | 1 cut(s) | 260 |
| Sse9I | AATT | 1 cut(s) | 291 |
| SsiI | CCGC | 1 cut(s) | 45 |
| SstI | GAGCTC | 1 cut(s) | 238 |
| TaaI | ACNGT | 1 cut(s) | 142 |
| TaiI | ACGT | 1 cut(s) | 38 |
| TaqI | TCGA | 1 cut(s) | 71 |
| TasI | AATT | 1 cut(s) | 291 |
| TfiI | GAWTC | 1 cut(s) | 196 |
| Tru1I | TTAA | 2 cut(s) | 276, 310 |
| Tru9I | TTAA | 2 cut(s) | 276, 310 |
| TseFI | GTSAC | 1 cut(s) | 175 |
| Tsp45I | GTSAC | 1 cut(s) | 175 |
| TspDTI | ATGAA | 2 cut(s) | 105, 174 |
| TspGWI | ACGGA | 1 cut(s) | 179 |
| XapI | RAATTY | 1 cut(s) | 291 |
| XceI | RCATGY | 1 cut(s) | 260 |