Disease resistance protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000036821 |
| rosa_multiflora | Rmu_co7986712.1_g000001 Rmu_sc0006084.1_g000007 |
| rosa_rugosa | Rorug05G0464600 Rorug05G0464600 |
| rosa_wichuraiana | Rw0G022740 Rw5G048220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 257 |
| AfaI | GTAC | 3 cut(s) | 27, 36, 183 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 44 |
| AflIII | ACRYGT | 1 cut(s) | 172 |
| AgsI | TTSAA | 2 cut(s) | 62, 262 |
| AjnI | CCWGG | 1 cut(s) | 243 |
| Alw21I | GWGCWC | 1 cut(s) | 135 |
| Alw44I | GTGCAC | 1 cut(s) | 131 |
| ApaLI | GTGCAC | 1 cut(s) | 131 |
| ApoI | RAATTY | 1 cut(s) | 257 |
| BaeGI | GKGCMC | 1 cut(s) | 135 |
| Bbv12I | GWGCWC | 1 cut(s) | 135 |
| BccI | CCATC | 1 cut(s) | 191 |
| BciT130I | CCWGG | 1 cut(s) | 245 |
| BciVI | GTATCC | 1 cut(s) | 243 |
| BfuI | GTATCC | 1 cut(s) | 243 |
| BglII | AGATCT | 1 cut(s) | 276 |
| BmcAI | AGTACT | 1 cut(s) | 27 |
| Bme1390I | CCNGG | 1 cut(s) | 245 |
| BmrFI | CCNGG | 1 cut(s) | 245 |
| BpmI | CTGGAG | 1 cut(s) | 122 |
| BsaJI | CCNNGG | 3 cut(s) | 39, 78, 243 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 44 |
| Bse1I | ACTGG | 1 cut(s) | 105 |
| BseBI | CCWGG | 1 cut(s) | 245 |
| BseDI | CCNNGG | 3 cut(s) | 39, 78, 243 |
| BseGI | GGATG | 3 cut(s) | 88, 112, 202 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 44 |
| BseNI | ACTGG | 1 cut(s) | 105 |
| BseRI | GAGGAG | 1 cut(s) | 156 |
| BseSI | GKGCMC | 1 cut(s) | 135 |
| BsiHKAI | GWGCWC | 1 cut(s) | 135 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 44 |
| Bsp1286I | GDGCHC | 1 cut(s) | 135 |
| Bsp143I | GATC | 1 cut(s) | 276 |
| Bsp19I | CCATGG | 2 cut(s) | 39, 78 |
| BsrI | ACTGG | 1 cut(s) | 105 |
| BssECI | CCNNGG | 3 cut(s) | 39, 78, 243 |
| BssMI | GATC | 1 cut(s) | 276 |
| BssT1I | CCWWGG | 2 cut(s) | 39, 78 |
| Bst2UI | CCWGG | 1 cut(s) | 245 |
| Bst4CI | ACNGT | 1 cut(s) | 121 |
| Bst6I | CTCTTC | 1 cut(s) | 133 |
| BstDEI | CTNAG | 1 cut(s) | 93 |
| BstDSI | CCRYGG | 2 cut(s) | 39, 78 |
| BstF5I | GGATG | 3 cut(s) | 88, 112, 202 |
| BstKTI | GATC | 1 cut(s) | 279 |
| BstMBI | GATC | 1 cut(s) | 276 |
| BstNI | CCWGG | 1 cut(s) | 245 |
| BstNSI | RCATGY | 1 cut(s) | 176 |
| BstSCI | CCNGG | 1 cut(s) | 243 |
| BstSLI | GKGCMC | 1 cut(s) | 135 |
| BstX2I | RGATCY | 1 cut(s) | 276 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 244 |
| BstYI | RGATCY | 1 cut(s) | 276 |
| BsuI | GTATCC | 1 cut(s) | 243 |
| BtgI | CCRYGG | 2 cut(s) | 39, 78 |
| BtsCI | GGATG | 3 cut(s) | 88, 112, 202 |
| BtsIMutI | CAGTG | 1 cut(s) | 117 |
| Csp6I | GTAC | 3 cut(s) | 26, 35, 182 |
| CviAII | CATG | 3 cut(s) | 40, 79, 173 |
| CviJI | RGCY | 3 cut(s) | 77, 202, 242 |
| CviKI_1 | RGCY | 3 cut(s) | 77, 202, 242 |
| CviQI | GTAC | 3 cut(s) | 26, 35, 182 |
| DdeI | CTNAG | 1 cut(s) | 93 |
| DpnI | GATC | 1 cut(s) | 278 |
| DpnII | GATC | 1 cut(s) | 276 |
| Eam1104I | CTCTTC | 1 cut(s) | 133 |
| EarI | CTCTTC | 1 cut(s) | 133 |
| Eco130I | CCWWGG | 2 cut(s) | 39, 78 |
| EcoRII | CCWGG | 1 cut(s) | 243 |
| EcoT14I | CCWWGG | 2 cut(s) | 39, 78 |
| ErhI | CCWWGG | 2 cut(s) | 39, 78 |
| FaeI | CATG | 3 cut(s) | 43, 82, 176 |
| FaiI | YATR | 5 cut(s) | 41, 80, 174, 213, 221 |
| FatI | CATG | 3 cut(s) | 39, 78, 172 |
| FokI | GGATG | 3 cut(s) | 95, 119, 209 |
| GsuI | CTGGAG | 1 cut(s) | 122 |
| Hin1II | CATG | 3 cut(s) | 43, 82, 176 |
| Hpy166II | GTNNAC | 1 cut(s) | 133 |
| Hpy188I | TCNGA | 1 cut(s) | 286 |
| Hpy8I | GTNNAC | 1 cut(s) | 133 |
| HpyCH4III | ACNGT | 1 cut(s) | 121 |
| HpyCH4V | TGCA | 3 cut(s) | 18, 133, 252 |
| HpyF3I | CTNAG | 1 cut(s) | 93 |
| Hsp92II | CATG | 3 cut(s) | 43, 82, 176 |
| Kzo9I | GATC | 1 cut(s) | 276 |
| LpnPI | CCDG | 3 cut(s) | 86, 230, 257 |
| MaeIII | GTNAC | 2 cut(s) | 47, 88 |
| MalI | GATC | 1 cut(s) | 278 |
| MboI | GATC | 1 cut(s) | 276 |
| MboII | GAAGA | 2 cut(s) | 74, 150 |
| MflI | RGATCY | 1 cut(s) | 276 |
| MhlI | GDGCHC | 1 cut(s) | 135 |
| MluCI | AATT | 1 cut(s) | 257 |
| MnlI | CCTC | 4 cut(s) | 38, 97, 134, 137 |
| MslI | CAYNNNNRTG | 1 cut(s) | 119 |
| MspR9I | CCNGG | 1 cut(s) | 245 |
| MvaI | CCWGG | 1 cut(s) | 245 |
| NcoI | CCATGG | 2 cut(s) | 39, 78 |
| NdeII | GATC | 1 cut(s) | 276 |
| NlaIII | CATG | 3 cut(s) | 43, 82, 176 |
| NmuCI | GTSAC | 2 cut(s) | 47, 88 |
| NspI | RCATGY | 1 cut(s) | 176 |
| PciI | ACATGT | 1 cut(s) | 172 |
| PscI | ACATGT | 1 cut(s) | 172 |
| Psp6I | CCWGG | 1 cut(s) | 243 |
| PspGI | CCWGG | 1 cut(s) | 243 |
| PsuI | RGATCY | 1 cut(s) | 276 |
| RsaI | GTAC | 3 cut(s) | 27, 36, 183 |
| RsaNI | GTAC | 3 cut(s) | 26, 35, 182 |
| RseI | CAYNNNNRTG | 1 cut(s) | 119 |
| Sau3AI | GATC | 1 cut(s) | 276 |
| ScaI | AGTACT | 1 cut(s) | 27 |
| ScrFI | CCNGG | 1 cut(s) | 245 |
| SduI | GDGCHC | 1 cut(s) | 135 |
| SetI | ASST | 1 cut(s) | 49 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 119 |
| Sse9I | AATT | 1 cut(s) | 257 |
| StyD4I | CCNGG | 1 cut(s) | 243 |
| StyI | CCWWGG | 2 cut(s) | 39, 78 |
| TaaI | ACNGT | 1 cut(s) | 121 |
| TaqI | TCGA | 1 cut(s) | 30 |
| TasI | AATT | 1 cut(s) | 257 |
| TatI | WGTACW | 1 cut(s) | 25 |
| TscAI | CASTG | 1 cut(s) | 124 |
| TseFI | GTSAC | 2 cut(s) | 47, 88 |
| Tsp45I | GTSAC | 2 cut(s) | 47, 88 |
| TspDTI | ATGAA | 2 cut(s) | 20, 99 |
| TspGWI | ACGGA | 1 cut(s) | 150 |
| TspRI | CASTG | 1 cut(s) | 124 |
| VneI | GTGCAC | 1 cut(s) | 131 |
| XapI | RAATTY | 1 cut(s) | 257 |
| XceI | RCATGY | 1 cut(s) | 176 |
| ZrmI | AGTACT | 1 cut(s) | 27 |