Rmu_sc0008835.1_g000008

phosphopyruvate hydratase activity

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008835.1
Physical Location & Seq
Reverse (-)
34060 .. 35095
1036 bp
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UTR
Exon/CDS
Intron
Rmu_sc0008835.1_g000008.1.cds

Sequence Viewer

Length: 537 bp
atgaaggttgttgggattgagaatggttgtatagttttcgataaaatgccgctaagaaatgtggtgtctgggactaccattatcactggtgaaattggtgagcaagttcaaattgttggtgataatctccttgttacaaacccaaagcgaggggagaaagcaatcaaagagaagagttgtaatgcccttgttttcaaggtgaatcaaattggttcagtaaccaaaagtgttgaagtgtcaaaacgtgctggccaggatgccacggcaaatcaccgaagtggtgcaactgaagcactggaattgatgttccaaggagaggcaaccaacattttaaaggaaatgttgctgtgttataagccaaatgcagagcggacattgaaatatggtcaggtatttgtgcattgttctgaccatgctattttcaatggcagcactacttcaaccgcaggccaagacaattttactattgagtgcaatgtaattattgctaaaaacccatgtttacattttggagatgagcgttttcttatggattga

Protein Analysis

178

Amino Acids

19.42

Weight (kDa)

6.43

Isoelectric Point (pI)

23.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0022974)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 354
AccBSI CCGCTC 1 cut(s) 370
AciI CCGC 3 cut(s) 50, 370, 444
AcoI YGGCCR 1 cut(s) 250
AcuI CTGAAG 1 cut(s) 309
AfiI CCNNNNNNNGG 2 cut(s) 149, 316
AgsI TTSAA 6 cut(s) 110, 196, 233, 379, 424, 441
AjnI CCWGG 1 cut(s) 252
AleI CACNNNNGTG 1 cut(s) 276
AloI GAACNNNNNNTCC 2 cut(s) 290, 322
AoxI GGCC 2 cut(s) 250, 448
ApeKI GCWGC 1 cut(s) 429
AsuHPI GGTGA 5 cut(s) 101, 110, 131, 211, 263
BalI TGGCCA 1 cut(s) 252
BbvI GCAGC 1 cut(s) 441
BceAI ACGGC 1 cut(s) 279
BciT130I CCWGG 1 cut(s) 254
BisI GCNGC 2 cut(s) 50, 430
BlsI GCNGC 2 cut(s) 51, 431
Bme1390I CCNGG 1 cut(s) 254
BmrFI CCNGG 1 cut(s) 254
BmsI GCATC 1 cut(s) 247
BsaJI CCNNGG 2 cut(s) 261, 310
Bsc4I CCNNNNNNNGG 2 cut(s) 149, 316
Bse1I ACTGG 2 cut(s) 91, 300
Bse3DI GCAATG 1 cut(s) 481
BseBI CCWGG 1 cut(s) 254
BseDI CCNNGG 2 cut(s) 261, 310
BseGI GGATG 1 cut(s) 262
BseLI CCNNNNNNNGG 2 cut(s) 149, 316
BseMI GCAATG 1 cut(s) 481
BseNI ACTGG 2 cut(s) 91, 300
BseXI GCAGC 1 cut(s) 441
BshFI GGCC 2 cut(s) 252, 450
BslFI GGGAC 1 cut(s) 85
BslI CCNNNNNNNGG 2 cut(s) 149, 316
BsmFI GGGAC 1 cut(s) 85
BsnI GGCC 2 cut(s) 252, 450
BspACI CCGC 3 cut(s) 50, 370, 444
BspANI GGCC 2 cut(s) 252, 450
BsrBI CCGCTC 1 cut(s) 370
BsrDI GCAATG 1 cut(s) 481
BsrI ACTGG 2 cut(s) 91, 300
BssECI CCNNGG 2 cut(s) 261, 310
BssT1I CCWWGG 1 cut(s) 310
Bst2UI CCWGG 1 cut(s) 254
Bst6I CTCTTC 1 cut(s) 167
BstC8I GCNNGC 2 cut(s) 250, 448
BstDEI CTNAG 1 cut(s) 53
BstDSI CCRYGG 1 cut(s) 261
BstF5I GGATG 1 cut(s) 262
BstMWI GCNNNNNNNGC 1 cut(s) 290
BstNI CCWGG 1 cut(s) 254
BstSCI CCNGG 1 cut(s) 252
BstV1I GCAGC 1 cut(s) 441
BsuRI GGCC 2 cut(s) 252, 450
BtgI CCRYGG 1 cut(s) 261
BtsCI GGATG 1 cut(s) 262
BtsIMutI CAGTG 2 cut(s) 84, 293
Cac8I GCNNGC 2 cut(s) 250, 448
CviAII CATG 2 cut(s) 413, 498
CviJI RGCY 3 cut(s) 252, 358, 450
CviKI_1 RGCY 3 cut(s) 252, 358, 450
DdeI CTNAG 1 cut(s) 53
DraI TTTAAA 1 cut(s) 333
EaeI YGGCCR 1 cut(s) 250
Eam1104I CTCTTC 1 cut(s) 167
EarI CTCTTC 1 cut(s) 167
Eco130I CCWWGG 1 cut(s) 310
Eco57I CTGAAG 1 cut(s) 309
EcoRII CCWGG 1 cut(s) 252
EcoT14I CCWWGG 1 cut(s) 310
ErhI CCWWGG 1 cut(s) 310
FaeI CATG 2 cut(s) 416, 501
FaiI YATR 6 cut(s) 32, 354, 384, 414, 499, 530
FaqI GGGAC 1 cut(s) 85
FatI CATG 2 cut(s) 412, 497
Fnu4HI GCNGC 2 cut(s) 50, 430
FokI GGATG 1 cut(s) 269
Fsp4HI GCNGC 2 cut(s) 50, 430
GluI GCNGC 2 cut(s) 50, 430
HaeIII GGCC 2 cut(s) 252, 450
Hin1II CATG 2 cut(s) 416, 501
HinfI GANTC 1 cut(s) 202
HphI GGTGA 5 cut(s) 101, 110, 131, 211, 263
Hpy166II GTNNAC 1 cut(s) 503
Hpy188I TCNGA 1 cut(s) 409
Hpy8I GTNNAC 1 cut(s) 503
HpyCH4IV ACGT 1 cut(s) 244
HpyCH4V TGCA 4 cut(s) 284, 365, 400, 474
HpyF10VI GCNNNNNNNGC 1 cut(s) 290
HpyF3I CTNAG 1 cut(s) 53
HpySE526I ACGT 1 cut(s) 244
Hsp92II CATG 2 cut(s) 416, 501
LpnPI CCDG 8 cut(s) 54, 72, 234, 239, 266, 281, 374, 432
Lsp1109I GCAGC 1 cut(s) 441
LweI GCATC 1 cut(s) 247
MaeII ACGT 1 cut(s) 244
MaeIII GTNAC 2 cut(s) 133, 217
MbiI CCGCTC 1 cut(s) 370
MboII GAAGA 1 cut(s) 184
MlsI TGGCCA 1 cut(s) 252
MluCI AATT 6 cut(s) 93, 111, 207, 299, 457, 480
MluNI TGGCCA 1 cut(s) 252
MnlI CCTC 2 cut(s) 143, 310
Mox20I TGGCCA 1 cut(s) 252
MscI TGGCCA 1 cut(s) 252
MseI TTAA 1 cut(s) 332
MslI CAYNNNNRTG 1 cut(s) 276
Msp20I TGGCCA 1 cut(s) 252
MspR9I CCNGG 1 cut(s) 254
MvaI CCWGG 1 cut(s) 254
MwoI GCNNNNNNNGC 1 cut(s) 290
NlaIII CATG 2 cut(s) 416, 501
OliI CACNNNNGTG 1 cut(s) 276
PfeI GAWTC 1 cut(s) 202
PkrI GCNGC 2 cut(s) 51, 431
PsiI TTATAA 1 cut(s) 354
Psp6I CCWGG 1 cut(s) 252
PspGI CCWGG 1 cut(s) 252
RseI CAYNNNNRTG 1 cut(s) 276
SaqAI TTAA 1 cut(s) 332
SatI GCNGC 2 cut(s) 50, 430
ScrFI CCNGG 1 cut(s) 254
SetI ASST 4 cut(s) 9, 201, 247, 393
SfaNI GCATC 1 cut(s) 247
SmiMI CAYNNNNRTG 1 cut(s) 276
Sse9I AATT 6 cut(s) 93, 111, 207, 299, 457, 480
SsiI CCGC 3 cut(s) 50, 370, 444
StyD4I CCNGG 1 cut(s) 252
StyI CCWWGG 1 cut(s) 310
TaiI ACGT 1 cut(s) 247
TaqI TCGA 1 cut(s) 39
TasI AATT 6 cut(s) 93, 111, 207, 299, 457, 480
TauI GCSGC 1 cut(s) 52
TfiI GAWTC 1 cut(s) 202
Tru1I TTAA 1 cut(s) 332
Tru9I TTAA 1 cut(s) 332
TscAI CASTG 2 cut(s) 91, 300
TseI GCWGC 1 cut(s) 429
TspDTI ATGAA 1 cut(s) 17
TspRI CASTG 2 cut(s) 91, 300
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.