Rmu_sc0008894.1_g000005

Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008894.1
Physical Location & Seq
Forward (+)
14635 .. 15495
861 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008894.1_g000005.1.cds

Sequence Viewer

Length: 561 bp
atgacgccgtttcggctcttgtctcgggcatcgcgtaggcttctgaagcctccttcactctctcgctcccatctctctgctgcagtctctacctatcacccaaccaccaaacccagccctaaagaaacgcctttcatcccttttaatctcaggcaccgttggattcccagttatcttgattctgatctcaggctcgtagcgcacatatccacttcatcgaacaaggacgacaaccgagtcagcgatgacccgaaagcccaagcttcttggatcgacgcttatttgcccaggcaggcccgcccttatgctaagctcgctcgcctcgacaagcccattggcacctggttgcttgcttggccttgcatgtggtcaataacattggcagcaaccccaggacaccttcctgatattaagatgttgacactatttggatgtggggctttgcttttaaggggcgctggatgtaccgtaaatgatctccttgatcgggatattgacaccatggtaatcctcgttggccatgcacttcttttgagtttgactaccttcttgagttggtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

186

Amino Acids

20.81

Weight (kDa)

9.76

Isoelectric Point (pI)

45.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0020560)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0044931
rosa_laevigata RLG00000034312
rosa_multiflora Rmu_sc0008894.1_g000005
rosa_rugosa Rorug05G0219600
rosa_samantha Rh5BG308500 Rh5DG319000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 236
AccB1I GGYRCC 2 cut(s) 153, 338
AccII CGCG 1 cut(s) 34
AciI CCGC 1 cut(s) 298
AclWI GGATC 1 cut(s) 278
AcoI YGGCCR 1 cut(s) 517
AcuI CTGAAG 1 cut(s) 65
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 1 cut(s) 466
AfiI CCNNNNNNNGG 1 cut(s) 487
AjnI CCWGG 3 cut(s) 287, 341, 391
AluBI AGCT 2 cut(s) 263, 313
AluI AGCT 2 cut(s) 263, 313
Alw26I GTCTC 2 cut(s) 27, 91
AlwI GGATC 1 cut(s) 278
Ama87I CYCGRG 1 cut(s) 24
AoxI GGCC 3 cut(s) 294, 356, 517
ApeKI GCWGC 2 cut(s) 80, 383
AspLEI GCGC 2 cut(s) 202, 458
AspS9I GGNCC 1 cut(s) 295
AsuHPI GGTGA 1 cut(s) 89
AvaI CYCGRG 1 cut(s) 24
BalI TGGCCA 1 cut(s) 519
BanI GGYRCC 2 cut(s) 153, 338
BbvI GCAGC 2 cut(s) 67, 395
BccI CCATC 1 cut(s) 78
BciT130I CCWGG 3 cut(s) 289, 343, 393
BcoDI GTCTC 2 cut(s) 27, 91
BfmI CTRYAG 1 cut(s) 81
BfoI RGCGCY 1 cut(s) 459
BglI GCCNNNNNGGC 1 cut(s) 13
BisI GCNGC 2 cut(s) 81, 384
BlpI GCTNAGC 1 cut(s) 309
BlsI GCNGC 2 cut(s) 82, 385
Bme1390I CCNGG 3 cut(s) 289, 343, 393
BmeT110I CYCGRG 1 cut(s) 24
BmgT120I GGNCC 1 cut(s) 295
BmiI GGNNCC 2 cut(s) 155, 340
BmrFI CCNGG 3 cut(s) 289, 343, 393
BmrI ACTGGG 1 cut(s) 162
BmsI GCATC 1 cut(s) 38
BmuI ACTGGG 1 cut(s) 162
Bpu1102I GCTNAGC 1 cut(s) 309
BsaBI GATNNNNATC 1 cut(s) 183
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 3 cut(s) 287, 391, 501
Bsc4I CCNNNNNNNGG 1 cut(s) 487
Bse1I ACTGG 1 cut(s) 168
Bse8I GATNNNNATC 1 cut(s) 183
BseBI CCWGG 3 cut(s) 289, 343, 393
BseDI CCNNGG 3 cut(s) 287, 391, 501
BseGI GGATG 3 cut(s) 135, 437, 467
BseJI GATNNNNATC 1 cut(s) 183
BseLI CCNNNNNNNGG 1 cut(s) 487
BseMII CTCAG 2 cut(s) 163, 202
BseNI ACTGG 1 cut(s) 168
BseXI GCAGC 2 cut(s) 67, 395
BseYI CCCAGC 1 cut(s) 113
Bsh1236I CGCG 1 cut(s) 34
BshFI GGCC 3 cut(s) 296, 358, 519
BshNI GGYRCC 2 cut(s) 153, 338
BsiHKCI CYCGRG 1 cut(s) 24
BslI CCNNNNNNNGG 1 cut(s) 487
BsmAI GTCTC 2 cut(s) 27, 91
BsnI GGCC 3 cut(s) 296, 358, 519
BsoBI CYCGRG 1 cut(s) 24
Bsp143I GATC 4 cut(s) 184, 270, 475, 484
Bsp1720I GCTNAGC 1 cut(s) 309
Bsp19I CCATGG 1 cut(s) 501
BspACI CCGC 1 cut(s) 298
BspANI GGCC 3 cut(s) 296, 358, 519
BspCNI CTCAG 2 cut(s) 162, 201
BspFNI CGCG 1 cut(s) 34
BspLI GGNNCC 2 cut(s) 155, 340
BspMAI CTGCAG 1 cut(s) 85
BspPI GGATC 1 cut(s) 278
BspT107I GGYRCC 2 cut(s) 153, 338
BsrI ACTGG 1 cut(s) 168
BssECI CCNNGG 3 cut(s) 287, 391, 501
BssMI GATC 4 cut(s) 184, 270, 475, 484
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 1 cut(s) 501
Bst2UI CCWGG 3 cut(s) 289, 343, 393
Bst4CI ACNGT 2 cut(s) 158, 469
BstACI GRCGYC 1 cut(s) 5
BstC8I GCNNGC 5 cut(s) 294, 298, 315, 319, 351
BstDEI CTNAG 3 cut(s) 149, 188, 309
BstDSI CCRYGG 1 cut(s) 501
BstF5I GGATG 3 cut(s) 135, 437, 467
BstFNI CGCG 1 cut(s) 34
BstH2I RGCGCY 1 cut(s) 459
BstHHI GCGC 2 cut(s) 202, 458
BstKTI GATC 4 cut(s) 187, 273, 478, 487
BstMAI GTCTC 2 cut(s) 27, 91
BstMBI GATC 4 cut(s) 184, 270, 475, 484
BstMWI GCNNNNNNNGC 5 cut(s) 13, 46, 199, 314, 355
BstNI CCWGG 3 cut(s) 289, 343, 393
BstNSI RCATGY 1 cut(s) 367
BstSCI CCNGG 3 cut(s) 287, 341, 391
BstSFI CTRYAG 1 cut(s) 81
BstUI CGCG 1 cut(s) 34
BstV1I GCAGC 2 cut(s) 67, 395
BsuRI GGCC 3 cut(s) 296, 358, 519
BtgI CCRYGG 1 cut(s) 501
BtgZI GCGATG 2 cut(s) 15, 258
BtsCI GGATG 3 cut(s) 135, 437, 467
Cac8I GCNNGC 5 cut(s) 294, 298, 315, 319, 351
CfoI GCGC 2 cut(s) 202, 458
Cfr13I GGNCC 1 cut(s) 295
CseI GACGC 2 cut(s) 13, 284
CsiI ACCWGGT 1 cut(s) 341
Csp6I GTAC 1 cut(s) 465
CviAII CATG 3 cut(s) 364, 502, 521
CviQI GTAC 1 cut(s) 465
DdeI CTNAG 3 cut(s) 149, 188, 309
DpnI GATC 4 cut(s) 186, 272, 477, 486
DpnII GATC 4 cut(s) 184, 270, 475, 484
DrdI GACNNNNNNGTC 1 cut(s) 236
DseDI GACNNNNNNGTC 1 cut(s) 236
EaeI YGGCCR 1 cut(s) 517
Eco130I CCWWGG 1 cut(s) 501
Eco57I CTGAAG 1 cut(s) 65
Eco88I CYCGRG 1 cut(s) 24
EcoRII CCWGG 3 cut(s) 287, 341, 391
EcoT14I CCWWGG 1 cut(s) 501
ErhI CCWWGG 1 cut(s) 501
FaeI CATG 3 cut(s) 367, 505, 524
FaiI YATR 5 cut(s) 206, 306, 365, 503, 522
FatI CATG 3 cut(s) 363, 501, 520
FauI CCCGC 1 cut(s) 305
Fnu4HI GCNGC 2 cut(s) 81, 384
FokI GGATG 3 cut(s) 122, 444, 474
Fsp4HI GCNGC 2 cut(s) 81, 384
GlaI GCGC 2 cut(s) 201, 457
GluI GCNGC 2 cut(s) 81, 384
GsaI CCCAGC 1 cut(s) 117
HaeII RGCGCY 1 cut(s) 459
HaeIII GGCC 3 cut(s) 296, 358, 519
HgaI GACGC 2 cut(s) 13, 284
HhaI GCGC 2 cut(s) 202, 458
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 3 cut(s) 367, 505, 524
Hin6I GCGC 2 cut(s) 200, 456
HinP1I GCGC 2 cut(s) 200, 456
HincII GTYRAC 1 cut(s) 420
HindII GTYRAC 1 cut(s) 420
HindIII AAGCTT 1 cut(s) 261
HinfI GANTC 3 cut(s) 163, 179, 237
HphI GGTGA 1 cut(s) 89
Hpy166II GTNNAC 1 cut(s) 420
Hpy188I TCNGA 2 cut(s) 45, 184
Hpy188III TCNNGA 4 cut(s) 176, 404, 488, 550
Hpy8I GTNNAC 1 cut(s) 420
Hpy99I CGWCG 1 cut(s) 278
HpyAV CCTTC 3 cut(s) 63, 410, 556
HpyCH4III ACNGT 2 cut(s) 158, 469
HpyCH4V TGCA 3 cut(s) 83, 363, 524
HpyF10VI GCNNNNNNNGC 5 cut(s) 13, 46, 199, 314, 355
HpyF3I CTNAG 3 cut(s) 149, 188, 309
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 3 cut(s) 367, 505, 524
HspAI GCGC 2 cut(s) 200, 456
Kzo9I GATC 4 cut(s) 184, 270, 475, 484
LmnI GCTCC 1 cut(s) 71
Lsp1109I GCAGC 2 cut(s) 67, 395
LweI GCATC 1 cut(s) 38
MabI ACCWGGT 1 cut(s) 341
MalI GATC 4 cut(s) 186, 272, 477, 486
MboI GATC 4 cut(s) 184, 270, 475, 484
MlsI TGGCCA 1 cut(s) 519
MluNI TGGCCA 1 cut(s) 519
MlyI GAGTC 1 cut(s) 246
MmeI TCCRAC 1 cut(s) 140
MnlI CCTC 3 cut(s) 60, 332, 521
Mox20I TGGCCA 1 cut(s) 519
MscI TGGCCA 1 cut(s) 519
MseI TTAA 3 cut(s) 144, 411, 449
Msp20I TGGCCA 1 cut(s) 519
MspR9I CCNGG 3 cut(s) 289, 343, 393
MvaI CCWGG 3 cut(s) 289, 343, 393
MvnI CGCG 1 cut(s) 34
MwoI GCNNNNNNNGC 5 cut(s) 13, 46, 199, 314, 355
NcoI CCATGG 1 cut(s) 501
NdeII GATC 4 cut(s) 184, 270, 475, 484
NlaIII CATG 3 cut(s) 367, 505, 524
NlaIV GGNNCC 2 cut(s) 155, 340
NspI RCATGY 1 cut(s) 367
PcsI WCGNNNNNNNCGW 2 cut(s) 31, 321
PfeI GAWTC 2 cut(s) 163, 179
PkrI GCNGC 2 cut(s) 82, 385
PleI GAGTC 1 cut(s) 245
PpsI GAGTC 1 cut(s) 245
Psp6I CCWGG 3 cut(s) 287, 341, 391
PspFI CCCAGC 1 cut(s) 113
PspGI CCWGG 3 cut(s) 287, 341, 391
PspN4I GGNNCC 2 cut(s) 155, 340
PspPI GGNCC 1 cut(s) 295
PstI CTGCAG 1 cut(s) 85
RsaI GTAC 1 cut(s) 466
RsaNI GTAC 1 cut(s) 465
SaqAI TTAA 3 cut(s) 144, 411, 449
SatI GCNGC 2 cut(s) 81, 384
Sau3AI GATC 4 cut(s) 184, 270, 475, 484
Sau96I GGNCC 1 cut(s) 295
SchI GAGTC 1 cut(s) 246
ScrFI CCNGG 3 cut(s) 289, 343, 393
SetI ASST 6 cut(s) 95, 265, 315, 344, 402, 548
SexAI ACCWGGT 1 cut(s) 341
SfaNI GCATC 1 cut(s) 38
SfcI CTRYAG 1 cut(s) 81
SmlI CTYRAG 1 cut(s) 550
SmoI CTYRAG 1 cut(s) 550
SsiI CCGC 1 cut(s) 298
StyD4I CCNGG 3 cut(s) 287, 341, 391
StyI CCWWGG 1 cut(s) 501
TaaI ACNGT 2 cut(s) 158, 469
TaqI TCGA 3 cut(s) 218, 273, 324
TfiI GAWTC 2 cut(s) 163, 179
Tru1I TTAA 3 cut(s) 144, 411, 449
Tru9I TTAA 3 cut(s) 144, 411, 449
TseI GCWGC 2 cut(s) 80, 383
TspDTI ATGAA 2 cut(s) 124, 204
XceI RCATGY 1 cut(s) 367
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.