Rmu_sc0009033.1_g000011

Domain of unknown function (DUF4283)

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009033.1
Physical Location & Seq
Forward (+)
38555 .. 38881
327 bp
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UTR
Exon/CDS
Intron
Rmu_sc0009033.1_g000011.1.cds

Sequence Viewer

Length: 327 bp
atgcccactatatggaaaatcaatagtggtttgtccatcagagtggttggaaatcgctttgttttctactttgattgtgaggaagatcgcaaccgttatcttcacggaggtccgtggttctaccgcaataccatgcttctcttggctctgtatgatgggattgctaatgtggattcaatcccacttcattctttggagctttggatcactgtttgggggctccctcctacgttgcataatcacctctctcttgctatgattggatcttccattggtagggttttgaggcttgatacggcggctttgaagcagaaggacgaggaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

108

Amino Acids

12.4

Weight (kDa)

6.4

Isoelectric Point (pI)

37.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0023093)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 12
AciI CCGC 2 cut(s) 124, 299
AclWI GGATC 2 cut(s) 212, 271
AfiI CCNNNNNNNGG 2 cut(s) 12, 276
AgsI TTSAA 2 cut(s) 177, 307
AluBI AGCT 1 cut(s) 199
AluI AGCT 1 cut(s) 199
AlwI GGATC 2 cut(s) 212, 271
AspS9I GGNCC 1 cut(s) 110
AsuHPI GGTGA 1 cut(s) 233
AvaII GGWCC 1 cut(s) 110
BanII GRGCYC 1 cut(s) 222
BccI CCATC 2 cut(s) 44, 149
BceAI ACGGC 1 cut(s) 312
BisI GCNGC 1 cut(s) 300
BlsI GCNGC 1 cut(s) 301
Bme18I GGWCC 1 cut(s) 110
BmgT120I GGNCC 1 cut(s) 110
BmiI GGNNCC 1 cut(s) 221
BsaJI CCNNGG 1 cut(s) 113
Bsc4I CCNNNNNNNGG 2 cut(s) 12, 276
BseDI CCNNGG 1 cut(s) 113
BseLI CCNNNNNNNGG 2 cut(s) 12, 276
BslI CCNNNNNNNGG 2 cut(s) 12, 276
Bsp1286I GDGCHC 1 cut(s) 222
Bsp143I GATC 3 cut(s) 85, 204, 263
BspACI CCGC 2 cut(s) 124, 299
BspLI GGNNCC 1 cut(s) 221
BspPI GGATC 2 cut(s) 212, 271
BssECI CCNNGG 1 cut(s) 113
BssMI GATC 3 cut(s) 85, 204, 263
Bst4CI ACNGT 2 cut(s) 95, 211
BstDSI CCRYGG 1 cut(s) 113
BstKTI GATC 3 cut(s) 88, 207, 266
BstMBI GATC 3 cut(s) 85, 204, 263
BstX2I RGATCY 1 cut(s) 263
BstXI CCANNNNNNTGG 1 cut(s) 43
BstYI RGATCY 1 cut(s) 263
BtgI CCRYGG 1 cut(s) 113
BtsIMutI CAGTG 1 cut(s) 207
Cfr13I GGNCC 1 cut(s) 110
CviAII CATG 1 cut(s) 133
CviJI RGCY 5 cut(s) 146, 199, 220, 289, 302
CviKI_1 RGCY 5 cut(s) 146, 199, 220, 289, 302
DpnI GATC 3 cut(s) 87, 206, 265
DpnII GATC 3 cut(s) 85, 204, 263
Eco24I GRGCYC 1 cut(s) 222
Eco47I GGWCC 1 cut(s) 110
EcoT38I GRGCYC 1 cut(s) 222
FaeI CATG 1 cut(s) 136
FaiI YATR 6 cut(s) 11, 13, 134, 153, 237, 257
FatI CATG 1 cut(s) 132
Fnu4HI GCNGC 1 cut(s) 300
FriOI GRGCYC 1 cut(s) 222
Fsp4HI GCNGC 1 cut(s) 300
GluI GCNGC 1 cut(s) 300
Hin1II CATG 1 cut(s) 136
HinfI GANTC 1 cut(s) 173
HphI GGTGA 1 cut(s) 233
Hpy188I TCNGA 1 cut(s) 41
HpyAV CCTTC 1 cut(s) 307
HpyCH4III ACNGT 2 cut(s) 95, 211
HpyCH4IV ACGT 1 cut(s) 230
HpyCH4V TGCA 1 cut(s) 235
HpySE526I ACGT 1 cut(s) 230
Hsp92II CATG 1 cut(s) 136
Kzo9I GATC 3 cut(s) 85, 204, 263
LmnI GCTCC 2 cut(s) 196, 225
MaeII ACGT 1 cut(s) 230
MalI GATC 3 cut(s) 87, 206, 265
MboI GATC 3 cut(s) 85, 204, 263
MboII GAAGA 3 cut(s) 92, 95, 258
MflI RGATCY 1 cut(s) 263
MhlI GDGCHC 1 cut(s) 222
MmeI TCCRAC 1 cut(s) 28
MnlI CCTC 6 cut(s) 73, 101, 234, 254, 279, 313
MslI CAYNNNNRTG 1 cut(s) 41
NdeII GATC 3 cut(s) 85, 204, 263
NlaIII CATG 1 cut(s) 136
NlaIV GGNNCC 1 cut(s) 221
PfeI GAWTC 1 cut(s) 173
PflMI CCANNNNNTGG 1 cut(s) 12
PkrI GCNGC 1 cut(s) 301
PspN4I GGNNCC 1 cut(s) 221
PspPI GGNCC 1 cut(s) 110
PsuI RGATCY 1 cut(s) 263
RseI CAYNNNNRTG 1 cut(s) 41
SatI GCNGC 1 cut(s) 300
Sau3AI GATC 3 cut(s) 85, 204, 263
Sau96I GGNCC 1 cut(s) 110
SduI GDGCHC 1 cut(s) 222
SetI ASST 4 cut(s) 112, 201, 233, 246
SgeI CNNG 6 cut(s) 116, 126, 145, 154, 263, 302
SinI GGWCC 1 cut(s) 110
SmiMI CAYNNNNRTG 1 cut(s) 41
SsiI CCGC 2 cut(s) 124, 299
TaaI ACNGT 2 cut(s) 95, 211
TaiI ACGT 1 cut(s) 233
TauI GCSGC 1 cut(s) 302
TfiI GAWTC 1 cut(s) 173
TscAI CASTG 1 cut(s) 214
TspDTI ATGAA 1 cut(s) 176
TspGWI ACGGA 2 cut(s) 102, 120
TspRI CASTG 1 cut(s) 214
Van91I CCANNNNNTGG 1 cut(s) 12
VpaK11BI GGWCC 1 cut(s) 110
XcmI CCANNNNNNNNNTGG 1 cut(s) 139
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.