General transcription factor IIH subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G12400 AT1G12400 |
| malus_domestica | MD04G1245800.v1.1 MD12G1192500.v1.1 |
| prunus_persica | Prupe.5G081100_v2.0.a1 |
| pyrus_communis | pycom04g21670 pycom06g06390 |
| rosa_chinensis | RchiOBHm_Chr7g0201071 |
| rosa_multiflora | Rmu_sc0010648.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00255540 |
| rosa_samantha | Rh7AG187700 Rh7BG191200 Rh7DG193400 |
| rosa_wichuraiana | Rw7G016480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 176, 190 |
| AflIII | ACRYGT | 1 cut(s) | 106 |
| AjiI | CACGTC | 1 cut(s) | 109 |
| AluBI | AGCT | 1 cut(s) | 149 |
| AluI | AGCT | 1 cut(s) | 149 |
| Alw26I | GTCTC | 1 cut(s) | 177 |
| ApeKI | GCWGC | 1 cut(s) | 146 |
| ApoI | RAATTY | 2 cut(s) | 176, 190 |
| AspLEI | GCGC | 1 cut(s) | 52 |
| AsuHPI | GGTGA | 1 cut(s) | 16 |
| BbvI | GCAGC | 1 cut(s) | 158 |
| BccI | CCATC | 2 cut(s) | 94, 110 |
| BcoDI | GTCTC | 1 cut(s) | 177 |
| BisI | GCNGC | 1 cut(s) | 147 |
| BlsI | GCNGC | 1 cut(s) | 148 |
| BmgBI | CACGTC | 1 cut(s) | 109 |
| BsaI | GGTCTC | 1 cut(s) | 177 |
| BseGI | GGATG | 1 cut(s) | 121 |
| BseMII | CTCAG | 1 cut(s) | 141 |
| BseXI | GCAGC | 1 cut(s) | 158 |
| BsmAI | GTCTC | 1 cut(s) | 177 |
| BsmI | GAATGC | 1 cut(s) | 13 |
| Bso31I | GGTCTC | 1 cut(s) | 177 |
| BspCNI | CTCAG | 1 cut(s) | 142 |
| BspTNI | GGTCTC | 1 cut(s) | 177 |
| BstC8I | GCNNGC | 1 cut(s) | 144 |
| BstDEI | CTNAG | 1 cut(s) | 150 |
| BstF5I | GGATG | 1 cut(s) | 121 |
| BstHHI | GCGC | 1 cut(s) | 52 |
| BstMAI | GTCTC | 1 cut(s) | 177 |
| BstNSI | RCATGY | 1 cut(s) | 146 |
| BstV1I | GCAGC | 1 cut(s) | 158 |
| BtrI | CACGTC | 1 cut(s) | 109 |
| BtsCI | GGATG | 1 cut(s) | 121 |
| BtsI | GCAGTG | 1 cut(s) | 77 |
| BtsIMutI | CAGTG | 1 cut(s) | 77 |
| Cac8I | GCNNGC | 1 cut(s) | 144 |
| CfoI | GCGC | 1 cut(s) | 52 |
| CviAII | CATG | 1 cut(s) | 143 |
| CviJI | RGCY | 2 cut(s) | 149, 205 |
| CviKI_1 | RGCY | 2 cut(s) | 149, 205 |
| DdeI | CTNAG | 1 cut(s) | 150 |
| Eco31I | GGTCTC | 1 cut(s) | 177 |
| EcoRI | GAATTC | 1 cut(s) | 190 |
| FaeI | CATG | 1 cut(s) | 146 |
| FaiI | YATR | 5 cut(s) | 41, 47, 101, 144, 198 |
| FatI | CATG | 1 cut(s) | 142 |
| Fnu4HI | GCNGC | 1 cut(s) | 147 |
| FokI | GGATG | 1 cut(s) | 128 |
| Fsp4HI | GCNGC | 1 cut(s) | 147 |
| FspEI | CC | 9 cut(s) | 3, 32, 57, 96, 98, 99, 102, 181, 200 |
| GlaI | GCGC | 1 cut(s) | 51 |
| GluI | GCNGC | 1 cut(s) | 147 |
| HhaI | GCGC | 1 cut(s) | 52 |
| Hin1II | CATG | 1 cut(s) | 146 |
| Hin6I | GCGC | 1 cut(s) | 50 |
| HinP1I | GCGC | 1 cut(s) | 50 |
| HphI | GGTGA | 1 cut(s) | 16 |
| Hpy188I | TCNGA | 1 cut(s) | 175 |
| HpyCH4IV | ACGT | 1 cut(s) | 108 |
| HpyCH4V | TGCA | 2 cut(s) | 136, 146 |
| HpyF3I | CTNAG | 1 cut(s) | 150 |
| HpySE526I | ACGT | 1 cut(s) | 108 |
| Hsp92II | CATG | 1 cut(s) | 146 |
| HspAI | GCGC | 1 cut(s) | 50 |
| LpnPI | CCDG | 1 cut(s) | 200 |
| Lsp1109I | GCAGC | 1 cut(s) | 158 |
| MaeII | ACGT | 1 cut(s) | 108 |
| MaeIII | GTNAC | 1 cut(s) | 35 |
| MluCI | AATT | 5 cut(s) | 53, 64, 73, 176, 190 |
| MnlI | CCTC | 1 cut(s) | 93 |
| MslI | CAYNNNNRTG | 1 cut(s) | 44 |
| MspA1I | CMGCKG | 1 cut(s) | 149 |
| Mva1269I | GAATGC | 1 cut(s) | 13 |
| NlaIII | CATG | 1 cut(s) | 146 |
| NmuCI | GTSAC | 1 cut(s) | 35 |
| NspI | RCATGY | 1 cut(s) | 146 |
| PaeI | GCATGC | 1 cut(s) | 146 |
| PctI | GAATGC | 1 cut(s) | 13 |
| PkrI | GCNGC | 1 cut(s) | 148 |
| PvuII | CAGCTG | 1 cut(s) | 149 |
| RseI | CAYNNNNRTG | 1 cut(s) | 44 |
| SatI | GCNGC | 1 cut(s) | 147 |
| SetI | ASST | 3 cut(s) | 46, 111, 151 |
| SgeI | CNNG | 6 cut(s) | 45, 119, 124, 139, 155, 199 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 44 |
| SphI | GCATGC | 1 cut(s) | 146 |
| Sse9I | AATT | 5 cut(s) | 53, 64, 73, 176, 190 |
| TaiI | ACGT | 1 cut(s) | 111 |
| TasI | AATT | 5 cut(s) | 53, 64, 73, 176, 190 |
| TscAI | CASTG | 1 cut(s) | 84 |
| TseFI | GTSAC | 1 cut(s) | 35 |
| TseI | GCWGC | 1 cut(s) | 146 |
| Tsp45I | GTSAC | 1 cut(s) | 35 |
| TspDTI | ATGAA | 2 cut(s) | 46, 88 |
| TspRI | CASTG | 1 cut(s) | 84 |
| XapI | RAATTY | 2 cut(s) | 176, 190 |
| XceI | RCATGY | 1 cut(s) | 146 |