Rmu_sc0011126.1_g000001

Signal peptidase complex catalytic subunit

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011126.1
Physical Location & Seq
Forward (+)
1 .. 869
869 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011126.1_g000001.1.cds

Sequence Viewer

Length: 248 bp
tgcaggttcatgaaagagaagatactggagaagtagatgtcctcacaaaaggagataacaattatggggatgacagacttctgtatgctcagggtcagttgtggctccaacggcaccatattatgggtagagctgtggggttcttaccctatgttggctgggtgacaattatcatgactgaaaagccaattattaagtatattctcattggcgcgttggggttgcttgttataacttcaaaggactaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

81

Amino Acids

9.19

Weight (kDa)

5.85

Isoelectric Point (pI)

22.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0022276)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g29820
prunus_persica Prupe.7G241300_v2.0.a1
rosa_multiflora Rmu_sc0002986.1_g000006 Rmu_sc0011126.1_g000001

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 232
AccB1I GGYRCC 1 cut(s) 113
AccB7I CCANNNNNTGG 1 cut(s) 123
AccII CGCG 1 cut(s) 214
AfiI CCNNNNNNNGG 2 cut(s) 123, 154
AgsI TTSAA 1 cut(s) 239
AluBI AGCT 1 cut(s) 133
AluI AGCT 1 cut(s) 133
AspLEI GCGC 1 cut(s) 214
AsuHPI GGTGA 1 cut(s) 174
BanI GGYRCC 1 cut(s) 113
BceAI ACGGC 1 cut(s) 127
BmiI GGNNCC 2 cut(s) 106, 115
BpmI CTGGAG 1 cut(s) 47
Bpu10I CCTNAGC 1 cut(s) 89
Bsc4I CCNNNNNNNGG 2 cut(s) 123, 154
Bse1I ACTGG 1 cut(s) 30
BseGI GGATG 1 cut(s) 75
BseLI CCNNNNNNNGG 2 cut(s) 123, 154
BseMII CTCAG 1 cut(s) 103
BseNI ACTGG 1 cut(s) 30
BseYI CCCAGC 1 cut(s) 158
Bsh1236I CGCG 1 cut(s) 214
BshNI GGYRCC 1 cut(s) 113
BslI CCNNNNNNNGG 2 cut(s) 123, 154
BspCNI CTCAG 1 cut(s) 102
BspFNI CGCG 1 cut(s) 214
BspHI TCATGA 2 cut(s) 9, 173
BspLI GGNNCC 2 cut(s) 106, 115
BspT107I GGYRCC 1 cut(s) 113
BsrI ACTGG 1 cut(s) 30
BstDEI CTNAG 1 cut(s) 89
BstF5I GGATG 1 cut(s) 75
BstFNI CGCG 1 cut(s) 214
BstHHI GCGC 1 cut(s) 214
BstMWI GCNNNNNNNGC 1 cut(s) 111
BstUI CGCG 1 cut(s) 214
BtsCI GGATG 1 cut(s) 75
CciI TCATGA 2 cut(s) 9, 173
CfoI GCGC 1 cut(s) 214
CviAII CATG 2 cut(s) 10, 174
CviJI RGCY 4 cut(s) 105, 133, 158, 186
CviKI_1 RGCY 4 cut(s) 105, 133, 158, 186
DdeI CTNAG 1 cut(s) 89
FaeI CATG 2 cut(s) 13, 177
FaiI YATR 9 cut(s) 11, 65, 86, 119, 124, 152, 175, 200, 232
FatI CATG 2 cut(s) 9, 173
FokI GGATG 1 cut(s) 82
GlaI GCGC 1 cut(s) 213
GsaI CCCAGC 1 cut(s) 162
GsuI CTGGAG 1 cut(s) 47
HhaI GCGC 1 cut(s) 214
Hin1II CATG 2 cut(s) 13, 177
Hin6I GCGC 1 cut(s) 212
HinP1I GCGC 1 cut(s) 212
HphI GGTGA 1 cut(s) 174
Hpy188III TCNNGA 2 cut(s) 10, 174
HpyCH4V TGCA 1 cut(s) 3
HpyF10VI GCNNNNNNNGC 1 cut(s) 111
HpyF3I CTNAG 1 cut(s) 89
Hsp92II CATG 2 cut(s) 13, 177
HspAI GCGC 1 cut(s) 212
LmnI GCTCC 1 cut(s) 110
LpnPI CCDG 3 cut(s) 11, 76, 144
MaeIII GTNAC 1 cut(s) 162
MboII GAAGA 1 cut(s) 31
MluCI AATT 3 cut(s) 60, 167, 188
MmeI TCCRAC 1 cut(s) 132
MnlI CCTC 1 cut(s) 52
MseI TTAA 1 cut(s) 194
MvnI CGCG 1 cut(s) 214
MwoI GCNNNNNNNGC 1 cut(s) 111
NlaIII CATG 2 cut(s) 13, 177
NlaIV GGNNCC 2 cut(s) 106, 115
NmuCI GTSAC 1 cut(s) 162
PagI TCATGA 2 cut(s) 9, 173
PflMI CCANNNNNTGG 1 cut(s) 123
PsiI TTATAA 1 cut(s) 232
PspFI CCCAGC 1 cut(s) 158
PspN4I GGNNCC 2 cut(s) 106, 115
SaqAI TTAA 1 cut(s) 194
SetI ASST 2 cut(s) 8, 135
SgeI CNNG 8 cut(s) 16, 22, 38, 103, 171, 186, 225, 238
Sse9I AATT 3 cut(s) 60, 167, 188
TasI AATT 3 cut(s) 60, 167, 188
Tru1I TTAA 1 cut(s) 194
Tru9I TTAA 1 cut(s) 194
TseFI GTSAC 1 cut(s) 162
Tsp45I GTSAC 1 cut(s) 162
TspDTI ATGAA 1 cut(s) 26
Van91I CCANNNNNTGG 1 cut(s) 123
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.