Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0009052

Physical Location & Seq

Genomic Coordinates Reverse (-)

20745255 .. 20749483

Gene Structure 4229 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G241300.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 543 bp

ATGGGATGGTTCGGGGAGACCATGGACTCCGTCAAGTCCATTCAGATCAGACAAGCTCTCTCCCAAGCCCTCACTCTCGGCTTGATTGTGACGTCGGCATTGATTATATGGAAAGGGTTAATATGTATGACTGGGAGCGAATCACCTGTGGTGGTTGTGCTCTCTGAAAGCATGGAGCCTGGCTTTGCAAGGGGTGACATTTTGTTCTTGCATATGAGCGAGGATCCTATTCGGGCAGGAGAAATTGTGGTGTTTAATGTGGATGGACGTGACATTCCAATCGTTCATAGAGTAATTAAGGTTCATGAGCGGAAAGATACTGGAGAAGTTTATGTCCTCACAAAAGGAGACAATAACGAAGAGGATGACAGGGCCCTGTATGCTCGGGGCCAGCATTGGTTGCAACGACGCCATATCATGGGGAGAGCTGTTGGGTTTTTGCCTTATGTTGGATGGGTGACAATTATCATGACAGAGAGGCCTATAATCAAGTACGTTCTGATAGGGGCGCTGGGATTGCTGGTCATAACCTCGAAGGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03060 map03060

Pfam Domains

Protein Families

Peptidase_S24

Protein Analysis

181

Amino Acids

20.11

Weight (kDa)

6.21

Isoelectric Point (pI)

35.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009052)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G15710
fragaria_vesca	FvH4_1g03470
malus_domestica	MD02G1033800.v1.1 MD15G1174600.v1.1
prunus_persica	Prupe.7G241300_v2.0.a1 Prupe.7G241300_v2.0.a1 Prupe.7G241300_v2.0.a1 Prupe.7G241300_v2.0.a1 Prupe.7G241300_v2.0.a1
pyrus_communis	pycom02g02770
rosa_chinensis	RchiOBHm_Chr2g0088691
rosa_laevigata	RLG00000015976
rosa_multiflora	Rmu_sc0006835.1_g000010 Rmu_sc0015442.1_g000015
rosa_roxburghii	Rroxscaffold_2G00152400
rosa_rugosa	Rorug01G0485900 Rorug01G0485900
rosa_samantha	Rh2AG041400 Rh2BG040100 Rh2CG040900 Rh2DG040500
rosa_wichuraiana	Rw2G003300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	95
AccB7I	CCANNNNNTGG	1 cut(s)	418
AccBSI	CCGCTC	1 cut(s)	310
AciI	CCGC	1 cut(s)	310
AclWI	GGATC	2 cut(s)	218, 231
AcyI	GRCGYC	2 cut(s)	92, 409
AfaI	GTAC	1 cut(s)	494
AfiI	CCNNNNNNNGG	2 cut(s)	418, 449
AjiI	CACGTC	1 cut(s)	269
AjnI	CCWGG	1 cut(s)	178
AluBI	AGCT	2 cut(s)	56, 428
AluI	AGCT	2 cut(s)	56, 428
Alw21I	GWGCWC	1 cut(s)	162
Alw26I	GTCTC	2 cut(s)	11, 342
AlwI	GGATC	2 cut(s)	218, 231
Ama87I	CYCGRG	1 cut(s)	384
AoxI	GGCC	3 cut(s)	372, 388, 479
ApaI	GGGCCC	1 cut(s)	376
AspLEI	GCGC	1 cut(s)	511
AspS9I	GGNCC	3 cut(s)	372, 373, 388
AsuHPI	GGTGA	3 cut(s)	135, 206, 469
AvaI	CYCGRG	1 cut(s)	384
BaeGI	GKGCMC	1 cut(s)	376
BamHI	GGATCC	1 cut(s)	223
BanII	GRGCYC	1 cut(s)	376
Bbv12I	GWGCWC	1 cut(s)	162
BccI	CCATC	2 cut(s)	257, 447
BciT130I	CCWGG	1 cut(s)	180
BcoDI	GTCTC	2 cut(s)	11, 342
BfoI	RGCGCY	1 cut(s)	512
Bme1390I	CCNGG	1 cut(s)	180
BmeT110I	CYCGRG	1 cut(s)	384
BmgBI	CACGTC	1 cut(s)	269
BmgT120I	GGNCC	3 cut(s)	372, 373, 388
BmiI	GGNNCC	4 cut(s)	177, 225, 374, 389
BmrFI	CCNGG	1 cut(s)	180
BmrI	ACTGGG	1 cut(s)	141
BmuI	ACTGGG	1 cut(s)	141
BpmI	CTGGAG	1 cut(s)	342
BsaHI	GRCGYC	2 cut(s)	92, 409
BsaI	GGTCTC	1 cut(s)	11
BsaJI	CCNNGG	1 cut(s)	21
BsaXI	ACNNNNNCTCC	2 cut(s)	231, 261
Bsc4I	CCNNNNNNNGG	2 cut(s)	418, 449
Bse1I	ACTGG	2 cut(s)	136, 325
BseBI	CCWGG	1 cut(s)	180
BseDI	CCNNGG	1 cut(s)	21
BseGI	GGATG	4 cut(s)	11, 268, 370, 458
BseLI	CCNNNNNNNGG	2 cut(s)	418, 449
BseNI	ACTGG	2 cut(s)	136, 325
BseSI	GKGCMC	1 cut(s)	376
BseYI	CCCAGC	1 cut(s)	511
BshFI	GGCC	3 cut(s)	374, 390, 481
BsiHKAI	GWGCWC	1 cut(s)	162
BsiHKCI	CYCGRG	1 cut(s)	384
BslI	CCNNNNNNNGG	2 cut(s)	418, 449
BsmAI	GTCTC	2 cut(s)	11, 342
BsnI	GGCC	3 cut(s)	374, 390, 481
Bso31I	GGTCTC	1 cut(s)	11
BsoBI	CYCGRG	1 cut(s)	384
Bsp120I	GGGCCC	1 cut(s)	372
Bsp1286I	GDGCHC	2 cut(s)	162, 376
Bsp143I	GATC	2 cut(s)	45, 223
Bsp19I	CCATGG	1 cut(s)	21
BspACI	CCGC	1 cut(s)	310
BspANI	GGCC	3 cut(s)	374, 390, 481
BspHI	TCATGA	2 cut(s)	304, 468
BspLI	GGNNCC	4 cut(s)	177, 225, 374, 389
BspPI	GGATC	2 cut(s)	218, 231
BspTNI	GGTCTC	1 cut(s)	11
BsrBI	CCGCTC	1 cut(s)	310
BsrI	ACTGG	2 cut(s)	136, 325
BssECI	CCNNGG	1 cut(s)	21
BssMI	GATC	2 cut(s)	45, 223
BssNI	GRCGYC	2 cut(s)	92, 409
BssT1I	CCWWGG	1 cut(s)	21
Bst2UI	CCWGG	1 cut(s)	180
Bst6I	CTCTTC	1 cut(s)	354
BstACI	GRCGYC	2 cut(s)	92, 409
BstAPI	GCANNNNNTGC	1 cut(s)	400
BstC8I	GCNNGC	1 cut(s)	392
BstDSI	CCRYGG	1 cut(s)	21
BstF5I	GGATG	4 cut(s)	11, 268, 370, 458
BstH2I	RGCGCY	1 cut(s)	512
BstHHI	GCGC	1 cut(s)	511
BstKTI	GATC	2 cut(s)	48, 226
BstMAI	GTCTC	2 cut(s)	11, 342
BstMBI	GATC	2 cut(s)	45, 223
BstMWI	GCNNNNNNNGC	3 cut(s)	380, 400, 517
BstNI	CCWGG	1 cut(s)	180
BstSCI	CCNGG	1 cut(s)	178
BstSLI	GKGCMC	1 cut(s)	376
BstX2I	RGATCY	1 cut(s)	223
BstYI	RGATCY	1 cut(s)	223
BsuRI	GGCC	3 cut(s)	374, 390, 481
BtgI	CCRYGG	1 cut(s)	21
BtrI	CACGTC	1 cut(s)	269
BtsCI	GGATG	4 cut(s)	11, 268, 370, 458
Cac8I	GCNNGC	1 cut(s)	392
CciI	TCATGA	2 cut(s)	304, 468
CfoI	GCGC	1 cut(s)	511
Cfr13I	GGNCC	3 cut(s)	372, 373, 388
CseI	GACGC	1 cut(s)	417
Csp6I	GTAC	1 cut(s)	493
CviAII	CATG	5 cut(s)	22, 172, 305, 418, 469
CviJI	RGCY	9 cut(s)	56, 68, 81, 178, 183, 374, 390, 428, 481
CviKI_1	RGCY	9 cut(s)	56, 68, 81, 178, 183, 374, 390, 428, 481
CviQI	GTAC	1 cut(s)	493
DpnI	GATC	2 cut(s)	47, 225
DpnII	GATC	2 cut(s)	45, 223
Eam1104I	CTCTTC	1 cut(s)	354
EarI	CTCTTC	1 cut(s)	354
Eco130I	CCWWGG	1 cut(s)	21
Eco147I	AGGCCT	1 cut(s)	481
Eco24I	GRGCYC	1 cut(s)	376
Eco31I	GGTCTC	1 cut(s)	11
Eco88I	CYCGRG	1 cut(s)	384
EcoO109I	RGGNCCY	2 cut(s)	372, 373
EcoRII	CCWGG	1 cut(s)	178
EcoT14I	CCWWGG	1 cut(s)	21
EcoT38I	GRGCYC	1 cut(s)	376
ErhI	CCWWGG	1 cut(s)	21
FaeI	CATG	5 cut(s)	25, 175, 308, 421, 472
FatI	CATG	5 cut(s)	21, 171, 304, 417, 468
FauNDI	CATATG	1 cut(s)	213
FokI	GGATG	4 cut(s)	18, 275, 377, 465
FriOI	GRGCYC	1 cut(s)	376
GlaI	GCGC	1 cut(s)	510
GsaI	CCCAGC	1 cut(s)	515
GsuI	CTGGAG	1 cut(s)	342
HaeII	RGCGCY	1 cut(s)	512
HaeIII	GGCC	3 cut(s)	374, 390, 481
HgaI	GACGC	1 cut(s)	417
HhaI	GCGC	1 cut(s)	511
Hin1I	GRCGYC	2 cut(s)	92, 409
Hin1II	CATG	5 cut(s)	25, 175, 308, 421, 472
Hin6I	GCGC	1 cut(s)	509
HinP1I	GCGC	1 cut(s)	509
HinfI	GANTC	2 cut(s)	26, 140
HphI	GGTGA	3 cut(s)	135, 206, 469
Hpy188I	TCNGA	4 cut(s)	45, 50, 166, 501
Hpy188III	TCNNGA	2 cut(s)	305, 469
Hpy99I	CGWCG	2 cut(s)	97, 411
HpyAV	CCTTC	1 cut(s)	529
HpyCH4IV	ACGT	3 cut(s)	92, 268, 495
HpyCH4V	TGCA	3 cut(s)	188, 211, 403
HpyF10VI	GCNNNNNNNGC	3 cut(s)	380, 400, 517
HpySE526I	ACGT	3 cut(s)	92, 268, 495
Hsp92I	GRCGYC	2 cut(s)	92, 409
Hsp92II	CATG	5 cut(s)	25, 175, 308, 421, 472
HspAI	GCGC	1 cut(s)	509
Kzo9I	GATC	2 cut(s)	45, 223
LmnI	GCTCC	2 cut(s)	135, 175
MaeII	ACGT	3 cut(s)	92, 268, 495
MaeIII	GTNAC	4 cut(s)	88, 194, 269, 457
MalI	GATC	2 cut(s)	47, 225
MbiI	CCGCTC	1 cut(s)	310
MboI	GATC	2 cut(s)	45, 223
MboII	GAAGA	1 cut(s)	371
MflI	RGATCY	1 cut(s)	223
MhlI	GDGCHC	2 cut(s)	162, 376
MluCI	AATT	3 cut(s)	243, 294, 462
MlyI	GAGTC	1 cut(s)	20
MmeI	TCCRAC	1 cut(s)	430
MnlI	CCTC	6 cut(s)	80, 214, 347, 355, 471, 541
MseI	TTAA	3 cut(s)	119, 255, 297
MspR9I	CCNGG	1 cut(s)	180
MvaI	CCWGG	1 cut(s)	180
MwoI	GCNNNNNNNGC	3 cut(s)	380, 400, 517
NcoI	CCATGG	1 cut(s)	21
NdeI	CATATG	1 cut(s)	213
NdeII	GATC	2 cut(s)	45, 223
NlaIII	CATG	5 cut(s)	25, 175, 308, 421, 472
NlaIV	GGNNCC	4 cut(s)	177, 225, 374, 389
NmeAIII	GCCGAG	1 cut(s)	57
NmuCI	GTSAC	4 cut(s)	88, 194, 269, 457
PagI	TCATGA	2 cut(s)	304, 468
PceI	AGGCCT	1 cut(s)	481
PfeI	GAWTC	1 cut(s)	140
PflFI	GACNNNGTC	1 cut(s)	29
PflMI	CCANNNNNTGG	1 cut(s)	418
PleI	GAGTC	1 cut(s)	20
PpsI	GAGTC	1 cut(s)	20
Psp6I	CCWGG	1 cut(s)	178
PspFI	CCCAGC	1 cut(s)	511
PspGI	CCWGG	1 cut(s)	178
PspN4I	GGNNCC	4 cut(s)	177, 225, 374, 389
PspOMI	GGGCCC	1 cut(s)	372
PspPI	GGNCC	3 cut(s)	372, 373, 388
PsrI	GAACNNNNNNTAC	2 cut(s)	285, 317
PsuI	RGATCY	1 cut(s)	223
PsyI	GACNNNGTC	1 cut(s)	29
RsaI	GTAC	1 cut(s)	494
RsaNI	GTAC	1 cut(s)	493
SaqAI	TTAA	3 cut(s)	119, 255, 297
Sau3AI	GATC	2 cut(s)	45, 223
Sau96I	GGNCC	3 cut(s)	372, 373, 388
SchI	GAGTC	1 cut(s)	20
ScrFI	CCNGG	1 cut(s)	180
SduI	GDGCHC	2 cut(s)	162, 376
SetI	ASST	8 cut(s)	58, 95, 148, 271, 303, 430, 498, 533
Sse9I	AATT	3 cut(s)	243, 294, 462
SseBI	AGGCCT	1 cut(s)	481
SsiI	CCGC	1 cut(s)	310
StuI	AGGCCT	1 cut(s)	481
StyD4I	CCNGG	1 cut(s)	178
StyI	CCWWGG	1 cut(s)	21
TaiI	ACGT	3 cut(s)	95, 271, 498
TaqI	TCGA	1 cut(s)	533
TasI	AATT	3 cut(s)	243, 294, 462
TfiI	GAWTC	1 cut(s)	140
Tru1I	TTAA	3 cut(s)	119, 255, 297
Tru9I	TTAA	3 cut(s)	119, 255, 297
TseFI	GTSAC	4 cut(s)	88, 194, 269, 457
Tsp45I	GTSAC	4 cut(s)	88, 194, 269, 457
TspDTI	ATGAA	2 cut(s)	275, 293
TspGWI	ACGGA	1 cut(s)	19
Tth111I	GACNNNGTC	1 cut(s)	29
Van91I	CCANNNNNTGG	1 cut(s)	418
ZraI	GACGTC	1 cut(s)	93

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.