Rmu_sc0012315.1_g000001

Purple acid phosphatase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0012315.1
Physical Location & Seq
Forward (+)
1 .. 1438
1438 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0012315.1_g000001.1.cds

Sequence Viewer

Length: 1359 bp
tttgttcacgacggcgtcatgaccaatctcaaaagcggtctcagatattattacaaggttgggagtgatgatggaggttggagcgaaacgcacagttttgtgtccagaaatggagattccgacgaagcagtagctttcatgttcggtgacatgggcactacaacgccgtatgccacgtttcttcgcgtccaggacgaaagcgtggccaccgtgaagtggattcttcgtgacattgaagctctcggtgacaagccggctttcgtgtcccacatcggagatataagctatgctagaggctattcatggctgtgggatcatttctttaatcagattgagccggttgcgacgaagctgccgtatcatgtttgcattgggaatcatgagtatgactggccgttgcagccgtggaagccggactggtctagttcgatttatgggaaagatggaggtggagaatgtggggtgccgtatagtgttaggttcaacatgcctgggaactcgtcggagccgactgggactagtgcaccggcgactaggaacctatactattcgtttgacatggggtcggttcattttgtgtacatttcgaccgagaccaattttgtgacgggaagcaagcagcgtgagtttataaagcgtgatttggagagtgtgaaccggaccaagactcctttcgtggtggttagtggacacaggccgatgtacactacgagcaatgagggaagggatgcgcctatgaggaggcaaatgctggagcatttggagcctttgtttgtgaagaacaatgtcactctagcattatggggacatgttcatagatacgagaggttttgtccgatgagtaactatacttgtgggagtagagggcctgttcatgttgtgattgggatgggaggacaggactggcaaccgatatgggaacctagagcggatcacccaactgatcccattttcccacagccactgaggtctatgtaccgcggtggtgaatttggctacactagattggttgcttcaaaagagaagcttacactttcttatgttggaaaccatgatggacaggtgcatgattcggtggagattctggcttcgggagaggttctaggtggtgaagccggtggtgatggtgttgaagctcttggtaacggggtcaaagctgctgtgaatggtagtgatggtgctggtttttctggaaatgggagcaaatcggattccaaacttactttgtttgtaaagggagcaagcgttttagtccttggggctttcataggctatgttattggttttgtttcacacgccaggaaaagggccatctcagaaaatagttggattccggtgaagagggaggaggattcatga

Protein Analysis

452

Amino Acids

50.0

Weight (kDa)

6.07

Isoelectric Point (pI)

36.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 632
AccB1I GGYRCC 1 cut(s) 463
AccBSI CCGCTC 1 cut(s) 929
AccII CGCG 2 cut(s) 186, 981
AciI CCGC 4 cut(s) 36, 929, 979, 981
AclWI GGATC 3 cut(s) 321, 938, 939
AcoI YGGCCR 2 cut(s) 204, 392
AcsI RAATTY 1 cut(s) 989
AcyI GRCGYC 1 cut(s) 15
AfaI GTAC 3 cut(s) 581, 704, 977
AfiI CCNNNNNNNGG 2 cut(s) 216, 1305
AflIII ACRYGT 1 cut(s) 808
AgsI TTSAA 4 cut(s) 236, 484, 1017, 1133
AhdI GACNNNNNGTC 1 cut(s) 562
AhlI ACTAGT 1 cut(s) 518
AjnI CCWGG 3 cut(s) 189, 490, 1298
AjuI GAANNNNNNNTTGG 2 cut(s) 656, 688
AluBI AGCT 7 cut(s) 134, 239, 285, 352, 1027, 1136, 1157
AluI AGCT 7 cut(s) 134, 239, 285, 352, 1027, 1136, 1157
Alw21I GWGCWC 1 cut(s) 526
Alw26I GTCTC 2 cut(s) 44, 587
Alw44I GTGCAC 1 cut(s) 522
AlwI GGATC 3 cut(s) 321, 938, 939
AlwNI CAGNNNCTG 1 cut(s) 964
AoxI GGCC 5 cut(s) 204, 392, 695, 866, 1308
ApaLI GTGCAC 1 cut(s) 522
ApeKI GCWGC 4 cut(s) 352, 400, 619, 1157
ApoI RAATTY 1 cut(s) 989
AspLEI GCGC 1 cut(s) 733
AspS9I GGNCC 3 cut(s) 660, 866, 1308
AsuHPI GGTGA 7 cut(s) 158, 257, 926, 998, 1121, 1133, 1348
AvaII GGWCC 1 cut(s) 660
BaeGI GKGCMC 2 cut(s) 158, 526
BalI TGGCCA 1 cut(s) 206
BanI GGYRCC 1 cut(s) 463
Bbv12I GWGCWC 1 cut(s) 526
BbvI GCAGC 4 cut(s) 339, 412, 631, 1144
BccI CCATC 7 cut(s) 65, 437, 883, 1049, 1118, 1169, 1319
BceAI ACGGC 6 cut(s) 28, 151, 340, 379, 388, 451
BcgI CGANNNNNNTGC 2 cut(s) 334, 368
BciT130I CCWGG 3 cut(s) 191, 492, 1300
BcoDI GTCTC 2 cut(s) 44, 587
BcuI ACTAGT 1 cut(s) 518
BfaI CTAG 8 cut(s) 291, 423, 519, 534, 794, 924, 1002, 1103
BisI GCNGC 4 cut(s) 353, 401, 620, 1158
BlsI GCNGC 4 cut(s) 354, 402, 621, 1159
Bme1390I CCNGG 3 cut(s) 191, 492, 1300
Bme18I GGWCC 1 cut(s) 660
BmeRI GACNNNNNGTC 1 cut(s) 562
BmgT120I GGNCC 3 cut(s) 660, 866, 1308
BmiI GGNNCC 5 cut(s) 465, 507, 539, 765, 921
BmrFI CCNGG 3 cut(s) 191, 492, 1300
BmrI ACTGGG 1 cut(s) 522
BmsI GCATC 1 cut(s) 718
BmuI ACTGGG 1 cut(s) 522
BpmI CTGGAG 1 cut(s) 773
BsaHI GRCGYC 1 cut(s) 15
BsaI GGTCTC 2 cut(s) 44, 587
BsaJI CCNNGG 4 cut(s) 404, 491, 979, 1255
BsaWI WCCGGW 2 cut(s) 657, 1333
BsaXI ACNNNNNCTCC 6 cut(s) 652, 682, 755, 785, 1230, 1260
Bsc4I CCNNNNNNNGG 2 cut(s) 216, 1305
Bse118I RCCGGY 4 cut(s) 253, 337, 526, 1115
Bse1I ACTGG 4 cut(s) 395, 422, 517, 908
Bse3DI GCAATG 1 cut(s) 721
BseBI CCWGG 3 cut(s) 191, 492, 1300
BseDI CCNNGG 4 cut(s) 404, 491, 979, 1255
BseGI GGATG 2 cut(s) 733, 894
BseLI CCNNNNNNNGG 2 cut(s) 216, 1305
BseMI GCAATG 1 cut(s) 721
BseMII CTCAG 3 cut(s) 55, 956, 1329
BseNI ACTGG 4 cut(s) 395, 422, 517, 908
BseRI GAGGAG 1 cut(s) 754
BseSI GKGCMC 2 cut(s) 158, 526
BseXI GCAGC 4 cut(s) 339, 412, 631, 1144
Bsh1236I CGCG 2 cut(s) 186, 981
Bsh1285I CGRYCG 1 cut(s) 591
BshFI GGCC 5 cut(s) 206, 394, 697, 868, 1310
BshNI GGYRCC 1 cut(s) 463
BsiEI CGRYCG 1 cut(s) 591
BsiHKAI GWGCWC 1 cut(s) 526
BsiSI CCGG 7 cut(s) 254, 338, 413, 527, 658, 1116, 1334
BslFI GGGAC 3 cut(s) 250, 529, 819
BslI CCNNNNNNNGG 2 cut(s) 216, 1305
BsmAI GTCTC 2 cut(s) 44, 587
BsmFI GGGAC 3 cut(s) 250, 529, 819
BsnI GGCC 5 cut(s) 206, 394, 697, 868, 1310
Bso31I GGTCTC 2 cut(s) 44, 587
Bsp1286I GDGCHC 2 cut(s) 158, 526
Bsp1407I TGTACA 2 cut(s) 579, 702
Bsp143I GATC 3 cut(s) 313, 931, 943
BspACI CCGC 4 cut(s) 36, 929, 979, 981
BspANI GGCC 5 cut(s) 206, 394, 697, 868, 1310
BspCNI CTCAG 3 cut(s) 54, 957, 1328
BspFNI CGCG 2 cut(s) 186, 981
BspHI TCATGA 3 cut(s) 18, 379, 1355
BspLI GGNNCC 5 cut(s) 465, 507, 539, 765, 921
BspPI GGATC 3 cut(s) 321, 938, 939
BspT107I GGYRCC 1 cut(s) 463
BspTNI GGTCTC 2 cut(s) 44, 587
BsrBI CCGCTC 1 cut(s) 929
BsrDI GCAATG 1 cut(s) 721
BsrFI RCCGGY 4 cut(s) 253, 337, 526, 1115
BsrGI TGTACA 2 cut(s) 579, 702
BsrI ACTGG 4 cut(s) 395, 422, 517, 908
BssAI RCCGGY 4 cut(s) 253, 337, 526, 1115
BssECI CCNNGG 4 cut(s) 404, 491, 979, 1255
BssMI GATC 3 cut(s) 313, 931, 943
BssNI GRCGYC 1 cut(s) 15
BssT1I CCWWGG 1 cut(s) 1255
Bst2UI CCWGG 3 cut(s) 191, 492, 1300
Bst4CI ACNGT 2 cut(s) 95, 211
Bst6I CTCTTC 1 cut(s) 1334
BstACI GRCGYC 1 cut(s) 15
BstAUI TGTACA 2 cut(s) 579, 702
BstC8I GCNNGC 3 cut(s) 255, 617, 1243
BstDEI CTNAG 3 cut(s) 41, 965, 1315
BstDSI CCRYGG 2 cut(s) 404, 979
BstF5I GGATG 2 cut(s) 733, 894
BstFNI CGCG 2 cut(s) 186, 981
BstHHI GCGC 1 cut(s) 733
BstKTI GATC 3 cut(s) 316, 934, 946
BstMAI GTCTC 2 cut(s) 44, 587
BstMBI GATC 3 cut(s) 313, 931, 943
BstMCI CGRYCG 1 cut(s) 591
BstMWI GCNNNNNNNGC 3 cut(s) 400, 409, 763
BstNI CCWGG 3 cut(s) 191, 492, 1300
BstNSI RCATGY 2 cut(s) 490, 812
BstSCI CCNGG 3 cut(s) 189, 490, 1298
BstSLI GKGCMC 2 cut(s) 158, 526
BstUI CGCG 2 cut(s) 186, 981
BstV1I GCAGC 4 cut(s) 339, 412, 631, 1144
BsuRI GGCC 5 cut(s) 206, 394, 697, 868, 1310
BtgI CCRYGG 2 cut(s) 404, 979
BtsCI GGATG 2 cut(s) 733, 894
BtsIMutI CAGTG 1 cut(s) 962
Cac8I GCNNGC 3 cut(s) 255, 617, 1243
CaiI CAGNNNCTG 1 cut(s) 964
CciI TCATGA 3 cut(s) 18, 379, 1355
CfoI GCGC 1 cut(s) 733
Cfr10I RCCGGY 4 cut(s) 253, 337, 526, 1115
Cfr13I GGNCC 3 cut(s) 660, 866, 1308
Cfr42I CCGCGG 1 cut(s) 982
CseI GACGC 2 cut(s) 4, 175
Csp6I GTAC 3 cut(s) 580, 703, 976
CviQI GTAC 3 cut(s) 580, 703, 976
DdeI CTNAG 3 cut(s) 41, 965, 1315
DpnI GATC 3 cut(s) 315, 933, 945
DpnII GATC 3 cut(s) 313, 931, 943
DriI GACNNNNNGTC 1 cut(s) 562
EaeI YGGCCR 2 cut(s) 204, 392
Eam1104I CTCTTC 1 cut(s) 1334
Eam1105I GACNNNNNGTC 1 cut(s) 562
EarI CTCTTC 1 cut(s) 1334
Eco130I CCWWGG 1 cut(s) 1255
Eco31I GGTCTC 2 cut(s) 44, 587
Eco47I GGWCC 1 cut(s) 660
EcoO109I RGGNCCY 1 cut(s) 866
EcoRII CCWGG 3 cut(s) 189, 490, 1298
EcoT14I CCWWGG 1 cut(s) 1255
ErhI CCWWGG 1 cut(s) 1255
FalI AAGNNNNNCTT 2 cut(s) 1011, 1043
FaqI GGGAC 3 cut(s) 250, 529, 819
Fnu4HI GCNGC 4 cut(s) 353, 401, 620, 1158
FokI GGATG 2 cut(s) 740, 901
Fsp4HI GCNGC 4 cut(s) 353, 401, 620, 1158
FspBI CTAG 8 cut(s) 291, 423, 519, 534, 794, 924, 1002, 1103
GlaI GCGC 1 cut(s) 732
GluI GCNGC 4 cut(s) 353, 401, 620, 1158
GsuI CTGGAG 1 cut(s) 773
HaeIII GGCC 5 cut(s) 206, 394, 697, 868, 1310
HapII CCGG 7 cut(s) 254, 338, 413, 527, 658, 1116, 1334
HgaI GACGC 2 cut(s) 4, 175
HhaI GCGC 1 cut(s) 733
Hin1I GRCGYC 1 cut(s) 15
Hin6I GCGC 1 cut(s) 731
HinP1I GCGC 1 cut(s) 731
HindIII AAGCTT 1 cut(s) 1025
HinfI GANTC 9 cut(s) 116, 220, 376, 667, 1070, 1081, 1211, 1330, 1352
HpaII CCGG 7 cut(s) 254, 338, 413, 527, 658, 1116, 1334
HphI GGTGA 7 cut(s) 158, 257, 926, 998, 1121, 1133, 1348
Hpy166II GTNNAC 6 cut(s) 7, 524, 580, 655, 689, 705
Hpy188I TCNGA 8 cut(s) 44, 121, 275, 330, 505, 837, 1210, 1318
Hpy188III TCNNGA 8 cut(s) 8, 19, 105, 227, 380, 1092, 1191, 1356
Hpy8I GTNNAC 6 cut(s) 7, 524, 580, 655, 689, 705
Hpy99I CGWCG 4 cut(s) 14, 125, 349, 505
HpyAV CCTTC 1 cut(s) 717
HpyCH4III ACNGT 2 cut(s) 95, 211
HpyCH4IV ACGT 1 cut(s) 176
HpyCH4V TGCA 4 cut(s) 369, 400, 524, 1066
HpyF10VI GCNNNNNNNGC 3 cut(s) 400, 409, 763
HpyF3I CTNAG 3 cut(s) 41, 965, 1315
HpySE526I ACGT 1 cut(s) 176
Hsp92I GRCGYC 1 cut(s) 15
HspAI GCGC 1 cut(s) 731
KroI GCCGGC 1 cut(s) 253
KroNI GCCGGC 1 cut(s) 255
KspI CCGCGG 1 cut(s) 982
Kzo9I GATC 3 cut(s) 313, 931, 943
LmnI GCTCC 6 cut(s) 81, 505, 754, 763, 1200, 1238
Lsp1109I GCAGC 4 cut(s) 339, 412, 631, 1144
LweI GCATC 1 cut(s) 718
MaeI CTAG 8 cut(s) 291, 423, 519, 534, 794, 924, 1002, 1103
MaeII ACGT 1 cut(s) 176
MaeIII GTNAC 7 cut(s) 146, 227, 245, 604, 787, 842, 1142
MalI GATC 3 cut(s) 315, 933, 945
MbiI CCGCTC 1 cut(s) 929
MboI GATC 3 cut(s) 313, 931, 943
MboII GAAGA 4 cut(s) 173, 215, 790, 1351
MhlI GDGCHC 2 cut(s) 158, 526
MlsI TGGCCA 1 cut(s) 206
MluCI AATT 2 cut(s) 598, 989
MluNI TGGCCA 1 cut(s) 206
MlyI GAGTC 1 cut(s) 661
MmeI TCCRAC 5 cut(s) 59, 144, 483, 1024, 1307
Mox20I TGGCCA 1 cut(s) 206
MroNI GCCGGC 1 cut(s) 253
MscI TGGCCA 1 cut(s) 206
MseI TTAA 1 cut(s) 324
MslI CAYNNNNRTG 2 cut(s) 307, 384
Msp20I TGGCCA 1 cut(s) 206
MspA1I CMGCKG 1 cut(s) 981
MspI CCGG 7 cut(s) 254, 338, 413, 527, 658, 1116, 1334
MspR9I CCNGG 3 cut(s) 191, 492, 1300
MvaI CCWGG 3 cut(s) 191, 492, 1300
MvnI CGCG 2 cut(s) 186, 981
MwoI GCNNNNNNNGC 3 cut(s) 400, 409, 763
NaeI GCCGGC 1 cut(s) 255
NdeII GATC 3 cut(s) 313, 931, 943
NgoMIV GCCGGC 1 cut(s) 253
NlaIV GGNNCC 5 cut(s) 465, 507, 539, 765, 921
NmuCI GTSAC 5 cut(s) 146, 227, 245, 604, 787
NspI RCATGY 2 cut(s) 490, 812
PagI TCATGA 3 cut(s) 18, 379, 1355
PciI ACATGT 1 cut(s) 808
PcsI WCGNNNNNNNCGW 2 cut(s) 353, 506
PdiI GCCGGC 1 cut(s) 255
PfeI GAWTC 8 cut(s) 116, 220, 376, 1070, 1081, 1211, 1330, 1352
PflFI GACNNNGTC 1 cut(s) 14
PfoI TCCNGGA 1 cut(s) 189
PkrI GCNGC 4 cut(s) 354, 402, 621, 1159
PleI GAGTC 1 cut(s) 661
PpsI GAGTC 1 cut(s) 661
PscI ACATGT 1 cut(s) 808
PsiI TTATAA 1 cut(s) 632
Psp6I CCWGG 3 cut(s) 189, 490, 1298
PspGI CCWGG 3 cut(s) 189, 490, 1298
PspN4I GGNNCC 5 cut(s) 465, 507, 539, 765, 921
PspPI GGNCC 3 cut(s) 660, 866, 1308
PstNI CAGNNNCTG 1 cut(s) 964
PsyI GACNNNGTC 1 cut(s) 14
RsaI GTAC 3 cut(s) 581, 704, 977
RsaNI GTAC 3 cut(s) 580, 703, 976
RseI CAYNNNNRTG 2 cut(s) 307, 384
SacII CCGCGG 1 cut(s) 982
SaqAI TTAA 1 cut(s) 324
SatI GCNGC 4 cut(s) 353, 401, 620, 1158
Sau3AI GATC 3 cut(s) 313, 931, 943
Sau96I GGNCC 3 cut(s) 660, 866, 1308
SchI GAGTC 1 cut(s) 661
ScrFI CCNGG 3 cut(s) 191, 492, 1300
SduI GDGCHC 2 cut(s) 158, 526
SfaNI GCATC 1 cut(s) 718
Sfr303I CCGCGG 1 cut(s) 982
SgrAI CRCCGGYG 1 cut(s) 526
SgrBI CCGCGG 1 cut(s) 982
SinI GGWCC 1 cut(s) 660
SmiMI CAYNNNNRTG 2 cut(s) 307, 384
SpeI ACTAGT 1 cut(s) 518
Sse9I AATT 2 cut(s) 598, 989
SsiI CCGC 4 cut(s) 36, 929, 979, 981
SspMI CTAG 8 cut(s) 291, 423, 519, 534, 794, 924, 1002, 1103
StyD4I CCNGG 3 cut(s) 189, 490, 1298
StyI CCWWGG 1 cut(s) 1255
TaaI ACNGT 2 cut(s) 95, 211
TaiI ACGT 1 cut(s) 179
TaqI TCGA 2 cut(s) 428, 587
TaqII GACCGA 1 cut(s) 605
TasI AATT 2 cut(s) 598, 989
TatI WGTACW 2 cut(s) 579, 702
TfiI GAWTC 8 cut(s) 116, 220, 376, 1070, 1081, 1211, 1330, 1352
Tru1I TTAA 1 cut(s) 324
Tru9I TTAA 1 cut(s) 324
TscAI CASTG 1 cut(s) 969
TseFI GTSAC 5 cut(s) 146, 227, 245, 604, 787
TseI GCWGC 4 cut(s) 352, 400, 619, 1157
Tsp45I GTSAC 5 cut(s) 146, 227, 245, 604, 787
TspDTI ATGAA 7 cut(s) 127, 291, 560, 803, 863, 1255, 1344
TspRI CASTG 1 cut(s) 969
Tth111I GACNNNGTC 1 cut(s) 14
VneI GTGCAC 1 cut(s) 522
VpaK11BI GGWCC 1 cut(s) 660
XapI RAATTY 1 cut(s) 989
XceI RCATGY 2 cut(s) 490, 812
XspI CTAG 8 cut(s) 291, 423, 519, 534, 794, 924, 1002, 1103
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.