Rmu_sc0015167.1_g000004

UDP-arabinopyranose mutase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0015167.1
Physical Location & Seq
Forward (+)
12976 .. 14540
1565 bp
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UTR
Exon/CDS
Intron
Rmu_sc0015167.1_g000004.1.cds

Sequence Viewer

Length: 264 bp
atgagaactccgccttctctgctatctctatctattgactcagctctcctcaacatctccagtatctccgatctctctcctctccctgaccacataatctgcgatctcttcttgaaaactttgagtgctggaaagctgaatgagaaagtcttgaagctattcatagcaactggcaaggatgaagtcctttcactaattgaggcacttaatattcggcagatccatagtcctgtccttcctaccagatgttctgaaaagttctga

Protein Analysis

87

Amino Acids

9.54

Weight (kDa)

6.71

Isoelectric Point (pI)

54.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018723)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 11
AclWI GGATC 1 cut(s) 214
AgsI TTSAA 2 cut(s) 115, 154
AluBI AGCT 3 cut(s) 44, 136, 157
AluI AGCT 3 cut(s) 44, 136, 157
AlwI GGATC 1 cut(s) 214
Asp700I GAANNNNTTC 1 cut(s) 158
BpmI CTGGAG 1 cut(s) 43
Bse1I ACTGG 2 cut(s) 60, 175
BseGI GGATG 1 cut(s) 184
BseMII CTCAG 1 cut(s) 54
BseNI ACTGG 2 cut(s) 60, 175
BseRI GAGGAG 2 cut(s) 38, 69
Bsp143I GATC 3 cut(s) 70, 103, 219
BspACI CCGC 1 cut(s) 11
BspCNI CTCAG 1 cut(s) 53
BspPI GGATC 1 cut(s) 214
BsrI ACTGG 2 cut(s) 60, 175
BssMI GATC 3 cut(s) 70, 103, 219
Bst6I CTCTTC 1 cut(s) 113
BstDEI CTNAG 1 cut(s) 40
BstF5I GGATG 1 cut(s) 184
BstKTI GATC 3 cut(s) 73, 106, 222
BstMBI GATC 3 cut(s) 70, 103, 219
BstMWI GCNNNNNNNGC 1 cut(s) 19
BstX2I RGATCY 1 cut(s) 219
BstYI RGATCY 1 cut(s) 219
BtsCI GGATG 1 cut(s) 184
CviJI RGCY 3 cut(s) 44, 136, 157
CviKI_1 RGCY 3 cut(s) 44, 136, 157
DdeI CTNAG 1 cut(s) 40
DpnI GATC 3 cut(s) 72, 105, 221
DpnII GATC 3 cut(s) 70, 103, 219
Eam1104I CTCTTC 1 cut(s) 113
EarI CTCTTC 1 cut(s) 113
FaiI YATR 3 cut(s) 95, 164, 225
FokI GGATG 1 cut(s) 191
GsuI CTGGAG 1 cut(s) 43
HinfI GANTC 1 cut(s) 38
Hpy188I TCNGA 3 cut(s) 70, 253, 263
Hpy188III TCNNGA 2 cut(s) 112, 151
HpyAV CCTTC 2 cut(s) 24, 245
HpyF10VI GCNNNNNNNGC 1 cut(s) 19
HpyF3I CTNAG 1 cut(s) 40
Kzo9I GATC 3 cut(s) 70, 103, 219
LpnPI CCDG 6 cut(s) 73, 99, 114, 156, 243, 256
MalI GATC 3 cut(s) 72, 105, 221
MboI GATC 3 cut(s) 70, 103, 219
MboII GAAGA 1 cut(s) 100
MflI RGATCY 1 cut(s) 219
MluCI AATT 1 cut(s) 195
MlyI GAGTC 1 cut(s) 32
MnlI CCTC 3 cut(s) 59, 90, 193
MroXI GAANNNNTTC 1 cut(s) 158
MseI TTAA 1 cut(s) 207
MwoI GCNNNNNNNGC 1 cut(s) 19
NdeII GATC 3 cut(s) 70, 103, 219
PdmI GAANNNNTTC 1 cut(s) 158
PleI GAGTC 1 cut(s) 32
PpsI GAGTC 1 cut(s) 32
PsuI RGATCY 1 cut(s) 219
SaqAI TTAA 1 cut(s) 207
Sau3AI GATC 3 cut(s) 70, 103, 219
SchI GAGTC 1 cut(s) 32
SetI ASST 3 cut(s) 46, 138, 159
SgeI CNNG 9 cut(s) 72, 98, 124, 141, 163, 183, 187, 242, 255
Sse9I AATT 1 cut(s) 195
SsiI CCGC 1 cut(s) 11
SspI AATATT 1 cut(s) 211
TasI AATT 1 cut(s) 195
Tru1I TTAA 1 cut(s) 207
Tru9I TTAA 1 cut(s) 207
TspDTI ATGAA 2 cut(s) 151, 195
XmnI GAANNNNTTC 1 cut(s) 158
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.