Rmu_sc0020823.1_g000008
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0020823.1
Physical Location & Seq
Reverse (-)
11661 .. 13046
1386 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0020823.1_g000008.1.cds

Sequence Viewer

Length: 1386 bp
atgatcttcatgaaagaagatctcaaaatcagtgatgtacaagtcggagtcctcgccgggatattaaacctatgcgccctagtcgggtccttagcggccggaagaacctccgattacattggtcgtcgttacaccatattcctatcctccacaattttcttggtgggggcaattctaatgggctacggcccaaactacgcggtcctaatgatcggtaggtgcacctctggcataggtgtgggctttgcactcatgatcgccccggtttatgcagcagagatttcatcccctacatcgcggggtatactaacctctctaccggagctttgcatcagtctcgggctcttattcggatacgtatcaaattacctttttgggaaactggctttgaaacttggctggagattgatgcttggggttgctggagtcccagcaattgctttgactattgggattcgcaaaatgccagagtccccaaggtggttagtgatgcaaagtcgtttaggggaggctaagaaagtgttggaactggtttctaataccaaacaagaagctcaagttcgttttcgtgacatcaaaattgcgattggtattgacgaaaataccgatgaggatgtcgtgaagcatagaactaacaatcgaggagaaggggtgtggaaacaattattcctgaggccgagtcctgctgtccggaggattttgctagcggcaatcggaatacatttcttcgaacatgcaacaggaatagaatccgtgattttgtttagtccgagaattttcaagaaagctggggttactagcaaagacacgctcttgcttgccacaatcgggattggggttacaaagattgtgtttatactgctggcaacatttctgattgacaaggttggtaggaggaagttattgttgatgagcactgcggggatgattatctctctcgtaggattagggtttggattgaccatggcagagaactccagaaaggagcttgcttggcctctaagtttcagcattgtggcagtgtatgtatttgtggctttcttctctattggacttgggccaattacatgggtttacagcactgagattttccctttgaagttgagagcacaagggactagtgttgtggtagctgtaaacagagttataaatgctgctgtttcaatgagtttcattccaatttataaggcaattacaataggaggggccttctttatgtttgcagggatatctgtgtcggcttgggttttcttctttttgttcttaccagagactaaaggaaggtctttggaagagatggaaatgctcttcagcaattataggagtactactggtgctgatcaatctagaaacagtgttggtgtgcaatctagaagtgatgcctag

Protein Analysis

461

Amino Acids

50.21

Weight (kDa)

9.85

Isoelectric Point (pI)

35.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014399)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G18480 AT4G36670
fragaria_vesca FvH4_1g13630
malus_domestica MD02G1151000.v1.1 MD15G1265500.v1.1
prunus_persica Prupe.7G152100_v2.0.a1
pyrus_communis pycom15g23120
rosa_chinensis RchiOBHm_Chr2g0101981
rosa_laevigata RLG00000017122
rosa_multiflora Rmu_sc0020823.1_g000008
rosa_roxburghii Rroxscaffold_2G00140870
rosa_rugosa Rorug02G0103700
rosa_samantha Rh2AG151700 Rh2BG157100 Rh2CG157100 Rh2DG157200
rosa_wichuraiana Rw2G011840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1148, 1185
AccI GTMKAC 1 cut(s) 304
AccII CGCG 2 cut(s) 200, 298
AccIII TCCGGA 1 cut(s) 690
AciI CCGC 5 cut(s) 95, 200, 298, 707, 920
AcoI YGGCCR 1 cut(s) 96
AcsI RAATTY 1 cut(s) 774
AcuI CTGAAG 1 cut(s) 1294
AfaI GTAC 2 cut(s) 39, 1327
AfiI CCNNNNNNNGG 3 cut(s) 84, 480, 828
AgsI TTSAA 4 cut(s) 391, 781, 1099, 1164
AhlI ACTAGT 1 cut(s) 1118
AluBI AGCT 5 cut(s) 325, 554, 788, 988, 1133
AluI AGCT 5 cut(s) 325, 554, 788, 988, 1133
Alw21I GWGCWC 3 cut(s) 224, 917, 1111
Alw26I GTCTC 2 cut(s) 341, 1265
Alw44I GTGCAC 1 cut(s) 220
Ama87I CYCGRG 1 cut(s) 338
Aor13HI TCCGGA 1 cut(s) 690
AoxI GGCC 6 cut(s) 96, 187, 674, 995, 1058, 1206
ApaLI GTGCAC 1 cut(s) 220
ApeKI GCWGC 2 cut(s) 272, 1154
ApoI RAATTY 1 cut(s) 774
AspLEI GCGC 1 cut(s) 77
AspS9I GGNCC 5 cut(s) 87, 188, 202, 1058, 1206
AsuC2I CCSGG 2 cut(s) 58, 263
AsuII TTCGAA 1 cut(s) 729
AsuNHI GCTAGC 1 cut(s) 703
AvaI CYCGRG 1 cut(s) 338
AvaII GGWCC 2 cut(s) 87, 202
AxyI CCTNAGG 1 cut(s) 671
BaeGI GKGCMC 1 cut(s) 224
BanII GRGCYC 1 cut(s) 345
Bbv12I GWGCWC 3 cut(s) 224, 917, 1111
BbvI GCAGC 2 cut(s) 284, 1141
BccI CCATC 1 cut(s) 1291
BceAI ACGGC 1 cut(s) 202
BcgI CGANNNNNNTGC 2 cut(s) 319, 353
BciVI GTATCC 1 cut(s) 347
BclI TGATCA 1 cut(s) 1339
BcnI CCSGG 2 cut(s) 58, 263
BcoDI GTCTC 2 cut(s) 341, 1265
BcuI ACTAGT 1 cut(s) 1118
BfaI CTAG 7 cut(s) 80, 704, 798, 1119, 1347, 1371, 1384
BfuI GTATCC 1 cut(s) 347
BglII AGATCT 1 cut(s) 19
BisI GCNGC 4 cut(s) 96, 273, 708, 1155
BlsI GCNGC 4 cut(s) 97, 274, 709, 1156
BmcAI AGTACT 1 cut(s) 1327
Bme1390I CCNGG 2 cut(s) 58, 263
Bme18I GGWCC 2 cut(s) 87, 202
BmeT110I CYCGRG 1 cut(s) 338
BmgT120I GGNCC 5 cut(s) 87, 188, 202, 1058, 1206
BmiI GGNNCC 2 cut(s) 88, 1207
BmrFI CCNGG 2 cut(s) 58, 263
BmsI GCATC 4 cut(s) 339, 399, 480, 1369
BmtI GCTAGC 1 cut(s) 707
BpmI CTGGAG 3 cut(s) 421, 444, 961
Bpu10I CCTNAGC 1 cut(s) 91
Bpu14I TTCGAA 1 cut(s) 729
BpuEI CTTGAG 1 cut(s) 540
BpuMI CCSGG 2 cut(s) 58, 263
BsaAI YACGTR 1 cut(s) 358
BsaBI GATNNNNATC 2 cut(s) 358, 929
BsaJI CCNNGG 3 cut(s) 261, 476, 963
BsaWI WCCGGW 2 cut(s) 319, 690
BsaXI ACNNNNNCTCC 2 cut(s) 636, 666
Bsc4I CCNNNNNNNGG 3 cut(s) 84, 480, 828
Bse1I ACTGG 3 cut(s) 387, 534, 1336
Bse21I CCTNAGG 1 cut(s) 671
Bse8I GATNNNNATC 2 cut(s) 358, 929
BseAI TCCGGA 1 cut(s) 690
BseDI CCNNGG 3 cut(s) 261, 476, 963
BseGI GGATG 3 cut(s) 284, 619, 930
BseJI GATNNNNATC 2 cut(s) 358, 929
BseLI CCNNNNNNNGG 3 cut(s) 84, 480, 828
BseMII CTCAG 2 cut(s) 662, 1074
BseNI ACTGG 3 cut(s) 387, 534, 1336
BseRI GAGGAG 1 cut(s) 657
BseSI GKGCMC 1 cut(s) 224
BseX3I CGGCCG 1 cut(s) 96
BseXI GCAGC 2 cut(s) 284, 1141
BseYI CCCAGC 2 cut(s) 430, 788
Bsh1236I CGCG 2 cut(s) 200, 298
Bsh1285I CGRYCG 1 cut(s) 99
BshFI GGCC 6 cut(s) 98, 189, 676, 997, 1060, 1208
BsiEI CGRYCG 1 cut(s) 99
BsiHKAI GWGCWC 3 cut(s) 224, 917, 1111
BsiHKCI CYCGRG 1 cut(s) 338
BsiSI CCGG 5 cut(s) 57, 99, 263, 320, 691
BslFI GGGAC 3 cut(s) 413, 457, 1129
BslI CCNNNNNNNGG 3 cut(s) 84, 480, 828
BsmAI GTCTC 2 cut(s) 341, 1265
BsmFI GGGAC 3 cut(s) 413, 457, 1129
BsnI GGCC 6 cut(s) 98, 189, 676, 997, 1060, 1208
BsoBI CYCGRG 1 cut(s) 338
Bsp119I TTCGAA 1 cut(s) 729
Bsp1286I GDGCHC 4 cut(s) 224, 345, 917, 1111
Bsp13I TCCGGA 1 cut(s) 690
Bsp1407I TGTACA 1 cut(s) 37
Bsp143I GATC 5 cut(s) 3, 19, 210, 255, 1339
Bsp19I CCATGG 1 cut(s) 963
BspACI CCGC 5 cut(s) 95, 200, 298, 707, 920
BspANI GGCC 6 cut(s) 98, 189, 676, 997, 1060, 1208
BspCNI CTCAG 2 cut(s) 663, 1075
BspEI TCCGGA 1 cut(s) 690
BspFNI CGCG 2 cut(s) 200, 298
BspHI TCATGA 2 cut(s) 9, 252
BspLI GGNNCC 2 cut(s) 88, 1207
BspOI GCTAGC 1 cut(s) 707
BspQI GCTCTTC 1 cut(s) 1313
BspT104I TTCGAA 1 cut(s) 729
BsrGI TGTACA 1 cut(s) 37
BsrI ACTGG 3 cut(s) 387, 534, 1336
BssECI CCNNGG 3 cut(s) 261, 476, 963
BssMI GATC 5 cut(s) 3, 19, 210, 255, 1339
BssNAI GTATAC 1 cut(s) 305
BssT1I CCWWGG 2 cut(s) 476, 963
Bst1107I GTATAC 1 cut(s) 305
Bst4CI ACNGT 1 cut(s) 1355
Bst6I CTCTTC 2 cut(s) 1287, 1313
BstAUI TGTACA 1 cut(s) 37
BstBAI YACGTR 1 cut(s) 358
BstBI TTCGAA 1 cut(s) 729
BstC8I GCNNGC 4 cut(s) 705, 819, 864, 990
BstDEI CTNAG 5 cut(s) 91, 513, 671, 1001, 1083
BstDSI CCRYGG 1 cut(s) 963
BstF5I GGATG 3 cut(s) 284, 619, 930
BstFNI CGCG 2 cut(s) 200, 298
BstHHI GCGC 1 cut(s) 77
BstKTI GATC 5 cut(s) 6, 22, 213, 258, 1342
BstMAI GTCTC 2 cut(s) 341, 1265
BstMBI GATC 5 cut(s) 3, 19, 210, 255, 1339
BstMCI CGRYCG 1 cut(s) 99
BstMWI GCNNNNNNNGC 2 cut(s) 228, 994
BstNSI RCATGY 1 cut(s) 737
BstSCI CCNGG 2 cut(s) 56, 261
BstSLI GKGCMC 1 cut(s) 224
BstSNI TACGTA 1 cut(s) 358
BstUI CGCG 2 cut(s) 200, 298
BstV1I GCAGC 2 cut(s) 284, 1141
BstX2I RGATCY 1 cut(s) 19
BstXI CCANNNNNNTGG 1 cut(s) 1068
BstYI RGATCY 1 cut(s) 19
BstZ17I GTATAC 1 cut(s) 305
BstZI CGGCCG 1 cut(s) 96
Bsu36I CCTNAGG 1 cut(s) 671
BsuI GTATCC 1 cut(s) 347
BsuRI GGCC 6 cut(s) 98, 189, 676, 997, 1060, 1208
BtgI CCRYGG 1 cut(s) 963
BtgZI GCGATG 1 cut(s) 279
BtsCI GGATG 3 cut(s) 284, 619, 930
BtsI GCAGTG 2 cut(s) 915, 1026
BtsIMutI CAGTG 5 cut(s) 37, 915, 1026, 1080, 1360
Cac8I GCNNGC 4 cut(s) 705, 819, 864, 990
CciI TCATGA 2 cut(s) 9, 252
CfoI GCGC 1 cut(s) 77
Cfr13I GGNCC 5 cut(s) 87, 188, 202, 1058, 1206
Csp6I GTAC 2 cut(s) 38, 1326
CviAII CATG 5 cut(s) 10, 253, 734, 964, 1068
CviQI GTAC 2 cut(s) 38, 1326
DdeI CTNAG 5 cut(s) 91, 513, 671, 1001, 1083
DpnI GATC 5 cut(s) 5, 21, 212, 257, 1341
DpnII GATC 5 cut(s) 3, 19, 210, 255, 1339
EaeI YGGCCR 1 cut(s) 96
EagI CGGCCG 1 cut(s) 96
Eam1104I CTCTTC 2 cut(s) 1287, 1313
EarI CTCTTC 2 cut(s) 1287, 1313
EclXI CGGCCG 1 cut(s) 96
Eco105I TACGTA 1 cut(s) 358
Eco130I CCWWGG 2 cut(s) 476, 963
Eco24I GRGCYC 1 cut(s) 345
Eco32I GATATC 1 cut(s) 1230
Eco47I GGWCC 2 cut(s) 87, 202
Eco52I CGGCCG 1 cut(s) 96
Eco57I CTGAAG 1 cut(s) 1294
Eco81I CCTNAGG 1 cut(s) 671
Eco88I CYCGRG 1 cut(s) 338
EcoO109I RGGNCCY 2 cut(s) 87, 1206
EcoRV GATATC 1 cut(s) 1230
EcoT14I CCWWGG 2 cut(s) 476, 963
EcoT38I GRGCYC 1 cut(s) 345
ErhI CCWWGG 2 cut(s) 476, 963
FaeI CATG 5 cut(s) 13, 256, 737, 967, 1071
FaqI GGGAC 3 cut(s) 413, 457, 1129
FatI CATG 5 cut(s) 9, 252, 733, 963, 1067
FauI CCCGC 2 cut(s) 291, 913
FbaI TGATCA 1 cut(s) 1339
FblI GTMKAC 1 cut(s) 304
Fnu4HI GCNGC 4 cut(s) 96, 273, 708, 1155
FokI GGATG 3 cut(s) 271, 626, 937
FriOI GRGCYC 1 cut(s) 345
Fsp4HI GCNGC 4 cut(s) 96, 273, 708, 1155
FspBI CTAG 7 cut(s) 80, 704, 798, 1119, 1347, 1371, 1384
GlaI GCGC 1 cut(s) 76
GluI GCNGC 4 cut(s) 96, 273, 708, 1155
GsaI CCCAGC 2 cut(s) 434, 792
GsuI CTGGAG 3 cut(s) 421, 444, 961
HaeIII GGCC 6 cut(s) 98, 189, 676, 997, 1060, 1208
HapII CCGG 5 cut(s) 57, 99, 263, 320, 691
HhaI GCGC 1 cut(s) 77
Hin1II CATG 5 cut(s) 13, 256, 737, 967, 1071
Hin6I GCGC 1 cut(s) 75
HinP1I GCGC 1 cut(s) 75
HinfI GANTC 6 cut(s) 48, 426, 454, 470, 679, 749
HpaII CCGG 5 cut(s) 57, 99, 263, 320, 691
Hpy166II GTNNAC 4 cut(s) 222, 305, 1075, 1138
Hpy188I TCNGA 6 cut(s) 47, 112, 353, 716, 771, 876
Hpy8I GTNNAC 4 cut(s) 222, 305, 1075, 1138
Hpy99I CGWCG 1 cut(s) 129
HpyAV CCTTC 3 cut(s) 641, 1219, 1275
HpyCH4III ACNGT 1 cut(s) 1355
HpyCH4IV ACGT 1 cut(s) 357
HpyCH4V TGCA 8 cut(s) 222, 248, 272, 330, 493, 737, 1223, 1366
HpyF10VI GCNNNNNNNGC 2 cut(s) 228, 994
HpyF3I CTNAG 5 cut(s) 91, 513, 671, 1001, 1083
HpySE526I ACGT 1 cut(s) 357
Hsp92II CATG 5 cut(s) 13, 256, 737, 967, 1071
HspAI GCGC 1 cut(s) 75
Kpn2I TCCGGA 1 cut(s) 690
Ksp22I TGATCA 1 cut(s) 1339
Kzo9I GATC 5 cut(s) 3, 19, 210, 255, 1339
LguI GCTCTTC 1 cut(s) 1313
LmnI GCTCC 2 cut(s) 322, 985
Lsp1109I GCAGC 2 cut(s) 284, 1141
LweI GCATC 4 cut(s) 339, 399, 480, 1369
MaeI CTAG 7 cut(s) 80, 704, 798, 1119, 1347, 1371, 1384
MaeII ACGT 1 cut(s) 357
MaeIII GTNAC 4 cut(s) 128, 569, 793, 838
MalI GATC 5 cut(s) 5, 21, 212, 257, 1341
MboI GATC 5 cut(s) 3, 19, 210, 255, 1339
MboII GAAGA 7 cut(s) 29, 114, 718, 1033, 1243, 1300, 1304
MfeI CAATTG 1 cut(s) 435
MflI RGATCY 1 cut(s) 19
MhlI GDGCHC 4 cut(s) 224, 345, 917, 1111
MlyI GAGTC 4 cut(s) 57, 435, 479, 688
MmeI TCCRAC 2 cut(s) 25, 504
MroI TCCGGA 1 cut(s) 690
MseI TTAA 1 cut(s) 65
MslI CAYNNNNRTG 1 cut(s) 236
MspI CCGG 5 cut(s) 57, 99, 263, 320, 691
MspR9I CCNGG 2 cut(s) 58, 263
MunI CAATTG 1 cut(s) 435
MvnI CGCG 2 cut(s) 200, 298
MwoI GCNNNNNNNGC 2 cut(s) 228, 994
NciI CCSGG 2 cut(s) 58, 263
NcoI CCATGG 1 cut(s) 963
NdeII GATC 5 cut(s) 3, 19, 210, 255, 1339
NheI GCTAGC 1 cut(s) 703
NlaIII CATG 5 cut(s) 13, 256, 737, 967, 1071
NlaIV GGNNCC 2 cut(s) 88, 1207
NmeAIII GCCGAG 1 cut(s) 702
NmuCI GTSAC 1 cut(s) 569
NspI RCATGY 1 cut(s) 737
NspV TTCGAA 1 cut(s) 729
PagI TCATGA 2 cut(s) 9, 252
PciSI GCTCTTC 1 cut(s) 1313
PcsI WCGNNNNNNNCGW 1 cut(s) 603
PfeI GAWTC 2 cut(s) 454, 749
PkrI GCNGC 4 cut(s) 97, 274, 709, 1156
PleI GAGTC 4 cut(s) 56, 434, 478, 687
PpsI GAGTC 4 cut(s) 56, 434, 478, 687
Ppu21I YACGTR 1 cut(s) 358
PpuMI RGGWCCY 1 cut(s) 87
PsiI TTATAA 2 cut(s) 1148, 1185
Psp5II RGGWCCY 1 cut(s) 87
PspFI CCCAGC 2 cut(s) 430, 788
PspN4I GGNNCC 2 cut(s) 88, 1207
PspPI GGNCC 5 cut(s) 87, 188, 202, 1058, 1206
PspPPI RGGWCCY 1 cut(s) 87
PsuI RGATCY 1 cut(s) 19
RsaI GTAC 2 cut(s) 39, 1327
RsaNI GTAC 2 cut(s) 38, 1326
RseI CAYNNNNRTG 1 cut(s) 236
SapI GCTCTTC 1 cut(s) 1313
SaqAI TTAA 1 cut(s) 65
SatI GCNGC 4 cut(s) 96, 273, 708, 1155
Sau3AI GATC 5 cut(s) 3, 19, 210, 255, 1339
Sau96I GGNCC 5 cut(s) 87, 188, 202, 1058, 1206
ScaI AGTACT 1 cut(s) 1327
SchI GAGTC 4 cut(s) 57, 435, 479, 688
ScrFI CCNGG 2 cut(s) 58, 263
SduI GDGCHC 4 cut(s) 224, 345, 917, 1111
SfaNI GCATC 4 cut(s) 339, 399, 480, 1369
SfuI TTCGAA 1 cut(s) 729
SinI GGWCC 2 cut(s) 87, 202
SmiMI CAYNNNNRTG 1 cut(s) 236
SmlI CTYRAG 1 cut(s) 555
SmoI CTYRAG 1 cut(s) 555
SnaBI TACGTA 1 cut(s) 358
SpeI ACTAGT 1 cut(s) 1118
SsiI CCGC 5 cut(s) 95, 200, 298, 707, 920
SspMI CTAG 7 cut(s) 80, 704, 798, 1119, 1347, 1371, 1384
StyD4I CCNGG 2 cut(s) 56, 261
StyI CCWWGG 2 cut(s) 476, 963
TaaI ACNGT 1 cut(s) 1355
TaiI ACGT 1 cut(s) 360
TaqI TCGA 2 cut(s) 640, 729
TatI WGTACW 2 cut(s) 37, 1325
TauI GCSGC 2 cut(s) 98, 710
TfiI GAWTC 2 cut(s) 454, 749
Tru1I TTAA 1 cut(s) 65
Tru9I TTAA 1 cut(s) 65
TscAI CASTG 5 cut(s) 37, 922, 1026, 1087, 1360
TseFI GTSAC 1 cut(s) 569
TseI GCWGC 2 cut(s) 272, 1154
Tsp45I GTSAC 1 cut(s) 569
TspDTI ATGAA 3 cut(s) 26, 273, 1162
TspGWI ACGGA 1 cut(s) 742
TspRI CASTG 5 cut(s) 37, 922, 1026, 1087, 1360
VneI GTGCAC 1 cut(s) 220
VpaK11BI GGWCC 2 cut(s) 87, 202
XapI RAATTY 1 cut(s) 774
XbaI TCTAGA 2 cut(s) 1346, 1370
XceI RCATGY 1 cut(s) 737
XcmI CCANNNNNNNNNTGG 1 cut(s) 157
XmiI GTMKAC 1 cut(s) 304
XspI CTAG 7 cut(s) 80, 704, 798, 1119, 1347, 1371, 1384
ZrmI AGTACT 1 cut(s) 1327
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.