Ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0000355.1_g000026 Rmu_sc0004574.1_g000006 Rmu_sc0008676.1_g000025 Rmu_sc0021503.1_g000003 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 223 |
| AcsI | RAATTY | 2 cut(s) | 23, 550 |
| AcuI | CTGAAG | 1 cut(s) | 472 |
| AfaI | GTAC | 1 cut(s) | 168 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 475 |
| AgsI | TTSAA | 4 cut(s) | 130, 356, 451, 550 |
| AluBI | AGCT | 2 cut(s) | 70, 149 |
| AluI | AGCT | 2 cut(s) | 70, 149 |
| ApeKI | GCWGC | 3 cut(s) | 67, 86, 191 |
| ApoI | RAATTY | 2 cut(s) | 23, 550 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 507 |
| AspA2I | CCTAGG | 1 cut(s) | 170 |
| AspS9I | GGNCC | 1 cut(s) | 261 |
| AvaII | GGWCC | 1 cut(s) | 261 |
| AvrII | CCTAGG | 1 cut(s) | 170 |
| BaeGI | GKGCMC | 1 cut(s) | 82 |
| BanII | GRGCYC | 1 cut(s) | 178 |
| BbvI | GCAGC | 3 cut(s) | 73, 79, 178 |
| BccI | CCATC | 1 cut(s) | 478 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 481, 515 |
| BfaI | CTAG | 3 cut(s) | 159, 171, 324 |
| BfmI | CTRYAG | 1 cut(s) | 87 |
| BisI | GCNGC | 3 cut(s) | 68, 87, 192 |
| BlnI | CCTAGG | 1 cut(s) | 170 |
| BlsI | GCNGC | 3 cut(s) | 69, 88, 193 |
| Bme18I | GGWCC | 1 cut(s) | 261 |
| BmgT120I | GGNCC | 1 cut(s) | 261 |
| BmiI | GGNNCC | 1 cut(s) | 177 |
| BsaBI | GATNNNNATC | 1 cut(s) | 339 |
| BsaJI | CCNNGG | 2 cut(s) | 107, 170 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 475 |
| Bse1I | ACTGG | 2 cut(s) | 389, 480 |
| Bse3DI | GCAATG | 1 cut(s) | 62 |
| Bse8I | GATNNNNATC | 1 cut(s) | 339 |
| BseDI | CCNNGG | 2 cut(s) | 107, 170 |
| BseJI | GATNNNNATC | 1 cut(s) | 339 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 475 |
| BseMI | GCAATG | 1 cut(s) | 62 |
| BseNI | ACTGG | 2 cut(s) | 389, 480 |
| BseSI | GKGCMC | 1 cut(s) | 82 |
| BseXI | GCAGC | 3 cut(s) | 73, 79, 178 |
| BsgI | GTGCAG | 1 cut(s) | 84 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 475 |
| BsmI | GAATGC | 1 cut(s) | 439 |
| Bsp1286I | GDGCHC | 2 cut(s) | 82, 178 |
| Bsp143I | GATC | 3 cut(s) | 49, 72, 334 |
| BspLI | GGNNCC | 1 cut(s) | 177 |
| BspMAI | CTGCAG | 1 cut(s) | 91 |
| BsrDI | GCAATG | 1 cut(s) | 62 |
| BsrI | ACTGG | 2 cut(s) | 389, 480 |
| BssECI | CCNNGG | 2 cut(s) | 107, 170 |
| BssMI | GATC | 3 cut(s) | 49, 72, 334 |
| BssT1I | CCWWGG | 2 cut(s) | 107, 170 |
| BstDEI | CTNAG | 1 cut(s) | 359 |
| BstKTI | GATC | 3 cut(s) | 52, 75, 337 |
| BstMBI | GATC | 3 cut(s) | 49, 72, 334 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 86, 188, 537 |
| BstNSI | RCATGY | 2 cut(s) | 486, 544 |
| BstSFI | CTRYAG | 1 cut(s) | 87 |
| BstSLI | GKGCMC | 1 cut(s) | 82 |
| BstV1I | GCAGC | 3 cut(s) | 73, 79, 178 |
| BtsI | GCAGTG | 1 cut(s) | 101 |
| BtsIMutI | CAGTG | 3 cut(s) | 101, 396, 473 |
| Cfr13I | GGNCC | 1 cut(s) | 261 |
| Csp6I | GTAC | 1 cut(s) | 167 |
| CviAII | CATG | 5 cut(s) | 115, 227, 421, 483, 541 |
| CviJI | RGCY | 5 cut(s) | 70, 112, 149, 176, 191 |
| CviKI_1 | RGCY | 5 cut(s) | 70, 112, 149, 176, 191 |
| CviQI | GTAC | 1 cut(s) | 167 |
| DdeI | CTNAG | 1 cut(s) | 359 |
| DpnI | GATC | 3 cut(s) | 51, 74, 336 |
| DpnII | GATC | 3 cut(s) | 49, 72, 334 |
| Eco130I | CCWWGG | 2 cut(s) | 107, 170 |
| Eco24I | GRGCYC | 1 cut(s) | 178 |
| Eco47I | GGWCC | 1 cut(s) | 261 |
| Eco57I | CTGAAG | 1 cut(s) | 472 |
| EcoT14I | CCWWGG | 2 cut(s) | 107, 170 |
| EcoT38I | GRGCYC | 1 cut(s) | 178 |
| ErhI | CCWWGG | 2 cut(s) | 107, 170 |
| FaeI | CATG | 5 cut(s) | 118, 230, 424, 486, 544 |
| FatI | CATG | 5 cut(s) | 114, 226, 420, 482, 540 |
| FblI | GTMKAC | 1 cut(s) | 223 |
| Fnu4HI | GCNGC | 3 cut(s) | 68, 87, 192 |
| FriOI | GRGCYC | 1 cut(s) | 178 |
| Fsp4HI | GCNGC | 3 cut(s) | 68, 87, 192 |
| FspBI | CTAG | 3 cut(s) | 159, 171, 324 |
| GluI | GCNGC | 3 cut(s) | 68, 87, 192 |
| Hin1II | CATG | 5 cut(s) | 118, 230, 424, 486, 544 |
| HinfI | GANTC | 1 cut(s) | 329 |
| Hpy166II | GTNNAC | 2 cut(s) | 224, 273 |
| Hpy188I | TCNGA | 2 cut(s) | 334, 557 |
| Hpy188III | TCNNGA | 2 cut(s) | 159, 274 |
| Hpy8I | GTNNAC | 2 cut(s) | 224, 273 |
| HpyAV | CCTTC | 1 cut(s) | 271 |
| HpyCH4V | TGCA | 6 cut(s) | 40, 67, 89, 101, 437, 514 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 86, 188, 537 |
| HpyF3I | CTNAG | 1 cut(s) | 359 |
| Hsp92II | CATG | 5 cut(s) | 118, 230, 424, 486, 544 |
| Kzo9I | GATC | 3 cut(s) | 49, 72, 334 |
| LmnI | GCTCC | 2 cut(s) | 181, 187 |
| LpnPI | CCDG | 5 cut(s) | 5, 184, 192, 402, 461 |
| Lsp1109I | GCAGC | 3 cut(s) | 73, 79, 178 |
| MaeI | CTAG | 3 cut(s) | 159, 171, 324 |
| MalI | GATC | 3 cut(s) | 51, 74, 336 |
| MboI | GATC | 3 cut(s) | 49, 72, 334 |
| MboII | GAAGA | 1 cut(s) | 130 |
| MhlI | GDGCHC | 2 cut(s) | 82, 178 |
| MluCI | AATT | 2 cut(s) | 23, 550 |
| MnlI | CCTC | 3 cut(s) | 47, 155, 387 |
| MroXI | GAANNNNTTC | 1 cut(s) | 507 |
| MseI | TTAA | 1 cut(s) | 533 |
| MslI | CAYNNNNRTG | 1 cut(s) | 425 |
| MspA1I | CMGCKG | 1 cut(s) | 70 |
| Mva1269I | GAATGC | 1 cut(s) | 439 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 86, 188, 537 |
| NdeII | GATC | 3 cut(s) | 49, 72, 334 |
| NlaIII | CATG | 5 cut(s) | 118, 230, 424, 486, 544 |
| NlaIV | GGNNCC | 1 cut(s) | 177 |
| NspI | RCATGY | 2 cut(s) | 486, 544 |
| PctI | GAATGC | 1 cut(s) | 439 |
| PdmI | GAANNNNTTC | 1 cut(s) | 507 |
| PfeI | GAWTC | 1 cut(s) | 329 |
| PkrI | GCNGC | 3 cut(s) | 69, 88, 193 |
| PspN4I | GGNNCC | 1 cut(s) | 177 |
| PspPI | GGNCC | 1 cut(s) | 261 |
| PstI | CTGCAG | 1 cut(s) | 91 |
| PvuII | CAGCTG | 1 cut(s) | 70 |
| RsaI | GTAC | 1 cut(s) | 168 |
| RsaNI | GTAC | 1 cut(s) | 167 |
| RseI | CAYNNNNRTG | 1 cut(s) | 425 |
| SaqAI | TTAA | 1 cut(s) | 533 |
| SatI | GCNGC | 3 cut(s) | 68, 87, 192 |
| Sau3AI | GATC | 3 cut(s) | 49, 72, 334 |
| Sau96I | GGNCC | 1 cut(s) | 261 |
| SduI | GDGCHC | 2 cut(s) | 82, 178 |
| SetI | ASST | 6 cut(s) | 58, 72, 151, 172, 325, 407 |
| SfcI | CTRYAG | 1 cut(s) | 87 |
| SinI | GGWCC | 1 cut(s) | 261 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 425 |
| Sse9I | AATT | 2 cut(s) | 23, 550 |
| SspMI | CTAG | 3 cut(s) | 159, 171, 324 |
| StyI | CCWWGG | 2 cut(s) | 107, 170 |
| TaqI | TCGA | 3 cut(s) | 52, 304, 501 |
| TasI | AATT | 2 cut(s) | 23, 550 |
| TfiI | GAWTC | 1 cut(s) | 329 |
| Tru1I | TTAA | 1 cut(s) | 533 |
| Tru9I | TTAA | 1 cut(s) | 533 |
| TscAI | CASTG | 3 cut(s) | 108, 396, 480 |
| TseI | GCWGC | 3 cut(s) | 67, 86, 191 |
| TspDTI | ATGAA | 3 cut(s) | 147, 224, 446 |
| TspRI | CASTG | 3 cut(s) | 108, 396, 480 |
| VpaK11BI | GGWCC | 1 cut(s) | 261 |
| XapI | RAATTY | 2 cut(s) | 23, 550 |
| XbaI | TCTAGA | 1 cut(s) | 158 |
| XceI | RCATGY | 2 cut(s) | 486, 544 |
| XmaJI | CCTAGG | 1 cut(s) | 170 |
| XmiI | GTMKAC | 1 cut(s) | 223 |
| XmnI | GAANNNNTTC | 1 cut(s) | 507 |
| XspI | CTAG | 3 cut(s) | 159, 171, 324 |