Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000078.1

Orthogroup ID

OG0007776

Physical Location & Seq

Genomic Coordinates Reverse (-)

49836 .. 57205

Gene Structure 7370 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000078.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2358 bp

atgacgggtctttggattctgcattggtttttcttgctgggttttgttttcttgattcatggaaatgcagacccagttgaagataagcaagctttgcttgactttgtgaacaaccatcctcactctcgctctctcaattgggatagcaacactcctgtctgcgactactggactggagtgacttgcagtgcagataagtcccatgttatagccgtcagattgcccggaatcggattgagcggcccgataccgcccaatactctcagtagggtttcagggcttcagattctgagccttagatccaatgtgattattggacacttcccttctgatttctccaatctaaagaacctgtctttattgtacctccagttcaacaacttttctgggccattgcctgacttctcagcttggaacaacctcaccattgtcaatctggccaacaatcacttcaatgggagcattcctgagtcgatttccaatctgactcagctttcggctttgaatcttgccaacaactcactttcgggtgaaattcctgacattgaagtgcccaagttgcagttgctgaatttgtccaacaataatctgagtggtattgtgcctaaatctctgcagaggttttcaagggcagtgtttgggggtaacaacaacctttcttttaccaattttccggctgaggttcctcctgttgctccaccctctaagcctaatcagaagtctgggaagcttggtgagactgcattgctaggaattattattgcagcggctgttttgggcattgtggcgtttgcatgtctgatacttgttgtctgcttaagaaggaaaagggaagatgggctttccgggaagttacagaagggggaaatgtcgccggagaaggtgatttcgaggagtcaagatgtgaataataggctggttttctttgagggatgtcattatgcatttgatctggaggatttgttgagggcttcagctgaggtactcggaaaggggacatttggtacagcgtataaggcaatattggaggatgcaacgattgtggtggtgaagaggttgaaggatgttaatgtggggaagaaggactttgagcagcatatggagattgttggcaatattaagcatgaaaatgtggttgaactcaaggcatattattattccaaagatgagaagctgatggtatatgactaccatactcaggggagcttctcagctatgttacacggtagaagaggagaggacagaattcctttagattgggatacccgactaagaatagctattggagcagcaagaggaatcgctcatatacatacagagaatggagggaagcttgtccatggaaacgtcaaagcctcaaatatctttctcaatccacaacagtatggctgtgtttctgatattggcctgacaactataatgagctcactggctccacccatctcccgtgcagctggttaccgagctccagaagtgacagacacccgaaaagcagcacagcctgctgatgtgtacagctttggggttgtgttactcgaactcctcactggaaaatcccccatccatactactgctggtgatgagattgtccacttggtcaggtgggttcattcagttgttcgtgaggagtggaccgcggaagtatttgacttagaactgatgaggtatccaggcatcgaggaagaaatggtggagatgttacagatagctatgtcttgcgtggtaagaatgccagatcagcgacctaagatgctggatgtagtgaagatgatagaaaacgtgcagcggatggataatgagaatcgtccatcttctggaaacagatcagaaagcacaacacccctcggatcaacaccgccgccagtagttggaacaccacaattgacctcacaagagagggtctttcaggtgatggcgtccaagcggatcttgaaggagctcaaggatctccagaaagatcctcctacctcttgcagcgctggcccagttgcagaagacatgtttcactggcaggcgacaatcatgggtcctgcagacagtccctacgcaggtggagtttttcttgtcaccatacactttcctccagactatccttttaagccaccaaaggttgcattcaggacaaaggtgtttcacccaaacattaatagcaatggcagcatttgccttgacattttgaaggaacagtggagtcctgcgctgaccatatcgaaggtattgctttcgatttgctccctgttgacagacccaaatcctgatgatcctttggtgccagagattgcccatatgtacaagaccgacaagaacaagtatgagaccactgcaaggagctggacccagaagtacgccatgggctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005886 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

785

Amino Acids

86.75

Weight (kDa)

6.63

Isoelectric Point (pI)

43.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007776)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G23740 AT4G23740
fragaria_vesca	FvH4_5g03900 FvH4_5g03900 FvH4_5g03900 FvH4_5g03900
malus_domestica	MD06G1100200.v1.1 MD14G1119800.v1.1
prunus_persica	Prupe.5G113900_v2.0.a1 Prupe.5G113900_v2.0.a1
pyrus_communis	pycom06g09540
rosa_chinensis	RchiOBHm_Chr7g0195601
rosa_laevigata	RLG00000004106
rosa_multiflora	Rmu_ssc0000078.1_g000009
rosa_roxburghii	Rroxscaffold_3G00260310
rosa_rugosa	Rorug07G0024700 Rorug07G0024800 Rorug07G0024800 Rorug07G0024900
rosa_samantha	Rh7AG152400 Rh7BG154000 Rh7CG157600 Rh7DG153300
rosa_wichuraiana	Rw7G013030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2039
Acc36I	ACCTGC	1 cut(s)	2039
AccB1I	GGYRCC	1 cut(s)	2269
AccB7I	CCANNNNNTGG	2 cut(s)	1814, 1868
AccBSI	CCGCTC	1 cut(s)	240
AccII	CGCG	1 cut(s)	1637
AciI	CCGC	9 cut(s)	240, 251, 767, 1635, 1637, 1786, 1856, 1859, 1924
AclWI	GGATC	6 cut(s)	294, 1855, 1934, 1952, 1953, 2255
AcoI	YGGCCR	1 cut(s)	438
AcsI	RAATTY	3 cut(s)	534, 571, 1245
AcuI	CTGAAG	2 cut(s)	266, 957
AcyI	GRCGYC	1 cut(s)	1916
AfaI	GTAC	6 cut(s)	365, 984, 1006, 1514, 2291, 2345
AfeI	AGCGCT	1 cut(s)	1978
AfiI	CCNNNNNNNGG	6 cut(s)	230, 1198, 1814, 1868, 2048, 2325
AflII	CTTAAG	1 cut(s)	817
AflIII	ACRYGT	1 cut(s)	1998
AjnI	CCWGG	1 cut(s)	1669
AjuI	GAANNNNNNNTTGG	2 cut(s)	434, 466
Alw21I	GWGCWC	3 cut(s)	1427, 1468, 1941
Alw26I	GTCTC	2 cut(s)	731, 2309
AlwI	GGATC	6 cut(s)	294, 1855, 1934, 1952, 1953, 2255
AlwNI	CAGNNNCTG	3 cut(s)	289, 568, 770
Aor51HI	AGCGCT	1 cut(s)	1978
AoxI	GGCC	5 cut(s)	241, 389, 438, 1405, 1981
ApeKI	GCWGC	8 cut(s)	764, 1093, 1289, 1451, 1493, 1783, 1974, 2157
ApoI	RAATTY	3 cut(s)	534, 571, 1245
ArsI	GACNNNNNNTTYG	2 cut(s)	478, 510
AseI	ATTAAT	1 cut(s)	2145
AspLEI	GCGC	2 cut(s)	1979, 2200
AspS9I	GGNCC	6 cut(s)	242, 389, 1632, 1982, 2027, 2334
AsuC2I	CCSGG	2 cut(s)	225, 847
AsuHPI	GGTGA	9 cut(s)	415, 542, 746, 895, 1060, 1589, 1921, 2059, 2126
AvaII	GGWCC	3 cut(s)	1632, 2027, 2334
BaeGI	GKGCMC	1 cut(s)	555
BalI	TGGCCA	1 cut(s)	440
BanI	GGYRCC	1 cut(s)	2269
BanII	GRGCYC	3 cut(s)	1427, 1468, 1941
BbsI	GAAGAC	1 cut(s)	2001
Bbv12I	GWGCWC	3 cut(s)	1427, 1468, 1941
BbvCI	CCTCAGC	2 cut(s)	678, 978
BbvI	GCAGC	8 cut(s)	776, 1105, 1301, 1463, 1505, 1795, 1986, 2169
BccI	CCATC	8 cut(s)	123, 830, 1171, 1448, 1568, 1783, 1816, 1906
BceAI	ACGGC	1 cut(s)	197
BcgI	CGANNNNNNTGC	2 cut(s)	2200, 2234
BciT130I	CCWGG	1 cut(s)	1671
BciVI	GTATCC	2 cut(s)	1255, 1677
BcnI	CCSGG	2 cut(s)	225, 847
BcoDI	GTCTC	2 cut(s)	731, 2309
BfaI	CTAG	2 cut(s)	749, 2356
BfmI	CTRYAG	2 cut(s)	614, 2031
BfoI	RGCGCY	1 cut(s)	1980
BfrI	CTTAAG	1 cut(s)	817
BfuAI	ACCTGC	1 cut(s)	2039
BfuI	GTATCC	2 cut(s)	1255, 1677
Bme1390I	CCNGG	3 cut(s)	225, 847, 1671
Bme18I	GGWCC	3 cut(s)	1632, 2027, 2334
BmgT120I	GGNCC	6 cut(s)	242, 389, 1632, 1982, 2027, 2334
BmiI	GGNNCC	5 cut(s)	684, 1434, 2028, 2271, 2336
BmrFI	CCNGG	3 cut(s)	225, 847, 1671
BmrI	ACTGGG	2 cut(s)	68, 1979
BmsI	GCATC	3 cut(s)	1021, 1683, 1740
BmuI	ACTGGG	2 cut(s)	68, 1979
BpiI	GAAGAC	1 cut(s)	2001
BpmI	CTGGAG	6 cut(s)	195, 353, 974, 1452, 1934, 2067
Bpu10I	CCTNAGC	2 cut(s)	678, 978
BpuEI	CTTGAG	2 cut(s)	1127, 1925
BpuMI	CCSGG	2 cut(s)	225, 847
BsaHI	GRCGYC	1 cut(s)	1916
BsaI	GGTCTC	1 cut(s)	2309
BsaJI	CCNNGG	4 cut(s)	1339, 1635, 1843, 2349
BsaXI	ACNNNNNCTCC	4 cut(s)	947, 977, 1524, 1554
Bsc4I	CCNNNNNNNGG	6 cut(s)	230, 1198, 1814, 1868, 2048, 2325
Bse1I	ACTGG	9 cut(s)	74, 173, 178, 370, 1434, 1552, 1862, 1985, 2012
Bse3DI	GCAATG	3 cut(s)	392, 743, 2158
BseBI	CCWGG	1 cut(s)	1671
BseDI	CCNNGG	4 cut(s)	1339, 1635, 1843, 2349
BseGI	GGATG	7 cut(s)	115, 938, 1036, 1069, 1560, 1762, 1794
BseLI	CCNNNNNNNGG	6 cut(s)	230, 1198, 1814, 1868, 2048, 2325
BseMI	GCAATG	3 cut(s)	392, 743, 2158
BseNI	ACTGG	9 cut(s)	74, 173, 178, 370, 1434, 1552, 1862, 1985, 2012
BseRI	GAGGAG	4 cut(s)	907, 1248, 1532, 1640
BseSI	GKGCMC	1 cut(s)	555
BseXI	GCAGC	8 cut(s)	776, 1105, 1301, 1463, 1505, 1795, 1986, 2169
BseYI	CCCAGC	1 cut(s)	37
BsgI	GTGCAG	3 cut(s)	210, 1470, 1802
Bsh1236I	CGCG	1 cut(s)	1637
BshFI	GGCC	5 cut(s)	243, 391, 440, 1407, 1983
BshNI	GGYRCC	1 cut(s)	2269
BsiHKAI	GWGCWC	3 cut(s)	1427, 1468, 1941
BsiSI	CCGG	4 cut(s)	225, 674, 846, 875
BslFI	GGGAC	3 cut(s)	184, 1009, 2025
BslI	CCNNNNNNNGG	6 cut(s)	230, 1198, 1814, 1868, 2048, 2325
BsmAI	GTCTC	2 cut(s)	731, 2309
BsmFI	GGGAC	3 cut(s)	184, 1009, 2025
BsmI	GAATGC	3 cut(s)	462, 1734, 2114
BsnI	GGCC	5 cut(s)	243, 391, 440, 1407, 1983
Bso31I	GGTCTC	1 cut(s)	2309
Bsp1286I	GDGCHC	4 cut(s)	555, 1427, 1468, 1941
Bsp1407I	TGTACA	2 cut(s)	1512, 2289
Bsp143I	GATC	9 cut(s)	299, 949, 1735, 1823, 1847, 1926, 1945, 1957, 2260
Bsp19I	CCATGG	2 cut(s)	1339, 2349
BspACI	CCGC	9 cut(s)	240, 251, 767, 1635, 1637, 1786, 1856, 1859, 1924
BspANI	GGCC	5 cut(s)	243, 391, 440, 1407, 1983
BspFNI	CGCG	1 cut(s)	1637
BspLI	GGNNCC	5 cut(s)	684, 1434, 2028, 2271, 2336
BspMAI	CTGCAG	2 cut(s)	618, 2035
BspMI	ACCTGC	1 cut(s)	2039
BspPI	GGATC	6 cut(s)	294, 1855, 1934, 1952, 1953, 2255
BspT107I	GGYRCC	1 cut(s)	2269
BspTI	CTTAAG	1 cut(s)	817
BspTNI	GGTCTC	1 cut(s)	2309
BsrBI	CCGCTC	1 cut(s)	240
BsrDI	GCAATG	3 cut(s)	392, 743, 2158
BsrGI	TGTACA	2 cut(s)	1512, 2289
BsrI	ACTGG	9 cut(s)	74, 173, 178, 370, 1434, 1552, 1862, 1985, 2012
BssECI	CCNNGG	4 cut(s)	1339, 1635, 1843, 2349
BssMI	GATC	9 cut(s)	299, 949, 1735, 1823, 1847, 1926, 1945, 1957, 2260
BssNI	GRCGYC	1 cut(s)	1916
BssT1I	CCWWGG	2 cut(s)	1339, 2349
Bst2UI	CCWGG	1 cut(s)	1671
Bst4CI	ACNGT	4 cut(s)	1226, 1383, 2039, 2187
Bst6I	CTCTTC	2 cut(s)	1046, 1225
BstACI	GRCGYC	1 cut(s)	1916
BstAFI	CTTAAG	1 cut(s)	817
BstAPI	GCANNNNNTGC	3 cut(s)	94, 1502, 2163
BstAUI	TGTACA	2 cut(s)	1512, 2289
BstC8I	GCNNGC	4 cut(s)	90, 1503, 1981, 2013
BstDSI	CCRYGG	3 cut(s)	1339, 1635, 2349
BstEII	GGTNACC	1 cut(s)	1457
BstF5I	GGATG	7 cut(s)	115, 938, 1036, 1069, 1560, 1762, 1794
BstFNI	CGCG	1 cut(s)	1637
BstH2I	RGCGCY	1 cut(s)	1980
BstHHI	GCGC	2 cut(s)	1979, 2200
BstKTI	GATC	9 cut(s)	302, 952, 1738, 1826, 1850, 1929, 1948, 1960, 2263
BstMAI	GTCTC	2 cut(s)	731, 2309
BstMBI	GATC	9 cut(s)	299, 949, 1735, 1823, 1847, 1926, 1945, 1957, 2260
BstMWI	GCNNNNNNNGC	9 cut(s)	94, 559, 1016, 1286, 1502, 1738, 1980, 2157, 2163
BstNI	CCWGG	1 cut(s)	1671
BstNSI	RCATGY	2 cut(s)	798, 2002
BstPI	GGTNACC	1 cut(s)	1457
BstSCI	CCNGG	3 cut(s)	223, 845, 1669
BstSFI	CTRYAG	2 cut(s)	614, 2031
BstSLI	GKGCMC	1 cut(s)	555
BstUI	CGCG	1 cut(s)	1637
BstV1I	GCAGC	8 cut(s)	776, 1105, 1301, 1463, 1505, 1795, 1986, 2169
BstV2I	GAAGAC	1 cut(s)	2001
BstX2I	RGATCY	4 cut(s)	299, 1926, 1945, 1957
BstYI	RGATCY	4 cut(s)	299, 1926, 1945, 1957
BsuI	GTATCC	2 cut(s)	1255, 1677
BsuRI	GGCC	5 cut(s)	243, 391, 440, 1407, 1983
BtgI	CCRYGG	3 cut(s)	1339, 1635, 2349
BtsCI	GGATG	7 cut(s)	115, 938, 1036, 1069, 1560, 1762, 1794
BtsI	GCAGTG	3 cut(s)	193, 639, 2319
BtsIMutI	CAGTG	7 cut(s)	193, 639, 1427, 1545, 2005, 2192, 2319
BveI	ACCTGC	1 cut(s)	2039
Cac8I	GCNNGC	4 cut(s)	90, 1503, 1981, 2013
CaiI	CAGNNNCTG	3 cut(s)	289, 568, 770
CfoI	GCGC	2 cut(s)	1979, 2200
Cfr13I	GGNCC	6 cut(s)	242, 389, 1632, 1982, 2027, 2334
Cfr42I	CCGCGG	1 cut(s)	1638
CseI	GACGC	1 cut(s)	1905
Csp6I	GTAC	6 cut(s)	364, 983, 1005, 1513, 2290, 2344
CspCI	CAANNNNNGTGG	2 cut(s)	1023, 1058
CviAII	CATG	8 cut(s)	59, 203, 795, 1124, 1340, 1999, 2023, 2350
CviQI	GTAC	6 cut(s)	364, 983, 1005, 1513, 2290, 2344
DpnI	GATC	9 cut(s)	301, 951, 1737, 1825, 1849, 1928, 1947, 1959, 2262
DpnII	GATC	9 cut(s)	299, 949, 1735, 1823, 1847, 1926, 1945, 1957, 2260
EaeI	YGGCCR	1 cut(s)	438
Eam1104I	CTCTTC	2 cut(s)	1046, 1225
EarI	CTCTTC	2 cut(s)	1046, 1225
Ecl136II	GAGCTC	3 cut(s)	1425, 1466, 1939
Eco130I	CCWWGG	2 cut(s)	1339, 2349
Eco24I	GRGCYC	3 cut(s)	1427, 1468, 1941
Eco31I	GGTCTC	1 cut(s)	2309
Eco47I	GGWCC	3 cut(s)	1632, 2027, 2334
Eco47III	AGCGCT	1 cut(s)	1978
Eco53kI	GAGCTC	3 cut(s)	1425, 1466, 1939
Eco57I	CTGAAG	2 cut(s)	266, 957
Eco91I	GGTNACC	1 cut(s)	1457
EcoICRI	GAGCTC	3 cut(s)	1425, 1466, 1939
EcoO109I	RGGNCCY	1 cut(s)	2027
EcoO65I	GGTNACC	1 cut(s)	1457
EcoRI	GAATTC	1 cut(s)	1245
EcoRII	CCWGG	1 cut(s)	1669
EcoT14I	CCWWGG	2 cut(s)	1339, 2349
EcoT22I	ATGCAT	1 cut(s)	946
EcoT38I	GRGCYC	3 cut(s)	1427, 1468, 1941
ErhI	CCWWGG	2 cut(s)	1339, 2349
FaeI	CATG	8 cut(s)	62, 206, 798, 1127, 1343, 2002, 2026, 2353
FalI	AAGNNNNNCTT	8 cut(s)	81, 113, 825, 857, 1070, 1102, 1913, 1945
FaqI	GGGAC	3 cut(s)	184, 1009, 2025
FatI	CATG	8 cut(s)	58, 202, 794, 1123, 1339, 1998, 2022, 2349
FauNDI	CATATG	2 cut(s)	1098, 2286
FokI	GGATG	7 cut(s)	102, 945, 1043, 1076, 1547, 1769, 1801
FriOI	GRGCYC	3 cut(s)	1427, 1468, 1941
FspBI	CTAG	2 cut(s)	749, 2356
GlaI	GCGC	2 cut(s)	1978, 2199
GsaI	CCCAGC	1 cut(s)	41
GsuI	CTGGAG	6 cut(s)	195, 353, 974, 1452, 1934, 2067
HaeII	RGCGCY	1 cut(s)	1980
HaeIII	GGCC	5 cut(s)	243, 391, 440, 1407, 1983
HapII	CCGG	4 cut(s)	225, 674, 846, 875
HgaI	GACGC	1 cut(s)	1905
HhaI	GCGC	2 cut(s)	1979, 2200
Hin1I	GRCGYC	1 cut(s)	1916
Hin1II	CATG	8 cut(s)	62, 206, 798, 1127, 1343, 2002, 2026, 2353
Hin6I	GCGC	2 cut(s)	1977, 2198
HinP1I	GCGC	2 cut(s)	1977, 2198
HincII	GTYRAC	1 cut(s)	2241
HindII	GTYRAC	1 cut(s)	2241
HindIII	AAGCTT	3 cut(s)	90, 728, 1331
HpaII	CCGG	4 cut(s)	225, 674, 846, 875
HphI	GGTGA	9 cut(s)	415, 542, 746, 895, 1060, 1589, 1921, 2059, 2126
Hpy166II	GTNNAC	5 cut(s)	109, 1513, 1591, 1632, 2241
Hpy8I	GTNNAC	5 cut(s)	109, 1513, 1591, 1632, 2241
HpyAV	CCTTC	9 cut(s)	336, 816, 853, 874, 1054, 1075, 1927, 2173, 2206
HpyCH4III	ACNGT	4 cut(s)	1226, 1383, 2039, 2187
HpyCH4IV	ACGT	2 cut(s)	1347, 1779
HpyF10VI	GCNNNNNNNGC	9 cut(s)	94, 559, 1016, 1286, 1502, 1738, 1980, 2157, 2163
HpySE526I	ACGT	2 cut(s)	1347, 1779
Hsp92I	GRCGYC	1 cut(s)	1916
Hsp92II	CATG	8 cut(s)	62, 206, 798, 1127, 1343, 2002, 2026, 2353
HspAI	GCGC	2 cut(s)	1977, 2198
KspI	CCGCGG	1 cut(s)	1638
Kzo9I	GATC	9 cut(s)	299, 949, 1735, 1823, 1847, 1926, 1945, 1957, 2260
LmnI	GCTCC	9 cut(s)	459, 700, 1203, 1286, 1438, 1471, 1936, 2237, 2328
Lsp1109I	GCAGC	8 cut(s)	776, 1105, 1301, 1463, 1505, 1795, 1986, 2169
LweI	GCATC	3 cut(s)	1021, 1683, 1740
MaeI	CTAG	2 cut(s)	749, 2356
MaeII	ACGT	2 cut(s)	1347, 1779
MaeIII	GTNAC	9 cut(s)	178, 644, 852, 1218, 1457, 1474, 1530, 1698, 2065
MalI	GATC	9 cut(s)	301, 951, 1737, 1825, 1849, 1928, 1947, 1959, 2262
MbiI	CCGCTC	1 cut(s)	240
MboI	GATC	9 cut(s)	299, 949, 1735, 1823, 1847, 1926, 1945, 1957, 2260
MboII	GAAGA	9 cut(s)	92, 845, 1063, 1090, 1242, 1694, 1777, 1803, 2006
MfeI	CAATTG	2 cut(s)	136, 1880
MflI	RGATCY	4 cut(s)	299, 1926, 1945, 1957
MhlI	GDGCHC	4 cut(s)	555, 1427, 1468, 1941
MlsI	TGGCCA	1 cut(s)	440
MluCI	AATT	7 cut(s)	136, 534, 571, 667, 753, 1245, 1880
MluNI	TGGCCA	1 cut(s)	440
MlyI	GAGTC	4 cut(s)	479, 481, 904, 2200
MmeI	TCCRAC	2 cut(s)	603, 1849
Mox20I	TGGCCA	1 cut(s)	440
Mph1103I	ATGCAT	1 cut(s)	946
MscI	TGGCCA	1 cut(s)	440
MseI	TTAA	5 cut(s)	818, 1068, 1119, 2097, 2145
MslI	CAYNNNNRTG	4 cut(s)	63, 453, 548, 1128
Msp20I	TGGCCA	1 cut(s)	440
MspA1I	CMGCKG	5 cut(s)	767, 977, 1454, 1637, 1786
MspCI	CTTAAG	1 cut(s)	817
MspI	CCGG	4 cut(s)	225, 674, 846, 875
MspR9I	CCNGG	3 cut(s)	225, 847, 1671
MunI	CAATTG	2 cut(s)	136, 1880
Mva1269I	GAATGC	3 cut(s)	462, 1734, 2114
MvaI	CCWGG	1 cut(s)	1671
MvnI	CGCG	1 cut(s)	1637
MwoI	GCNNNNNNNGC	9 cut(s)	94, 559, 1016, 1286, 1502, 1738, 1980, 2157, 2163
NciI	CCSGG	2 cut(s)	225, 847
NcoI	CCATGG	2 cut(s)	1339, 2349
NdeI	CATATG	2 cut(s)	1098, 2286
NdeII	GATC	9 cut(s)	299, 949, 1735, 1823, 1847, 1926, 1945, 1957, 2260
NlaIII	CATG	8 cut(s)	62, 206, 798, 1127, 1343, 2002, 2026, 2353
NlaIV	GGNNCC	5 cut(s)	684, 1434, 2028, 2271, 2336
NmuCI	GTSAC	3 cut(s)	178, 1474, 2065
NsiI	ATGCAT	1 cut(s)	946
NspI	RCATGY	2 cut(s)	798, 2002
PaqCI	CACCTGC	1 cut(s)	2039
PciI	ACATGT	1 cut(s)	1998
PctI	GAATGC	3 cut(s)	462, 1734, 2114
PfeI	GAWTC	7 cut(s)	16, 55, 228, 286, 505, 1299, 1801
PflMI	CCANNNNNTGG	2 cut(s)	1814, 1868
PfoI	TCCNGGA	1 cut(s)	845
PleI	GAGTC	4 cut(s)	478, 481, 903, 2199
PpsI	GAGTC	4 cut(s)	478, 481, 903, 2199
PpuMI	RGGWCCY	1 cut(s)	2027
PscI	ACATGT	1 cut(s)	1998
PshBI	ATTAAT	1 cut(s)	2145
Psp124BI	GAGCTC	3 cut(s)	1427, 1468, 1941
Psp5II	RGGWCCY	1 cut(s)	2027
Psp6I	CCWGG	1 cut(s)	1669
PspEI	GGTNACC	1 cut(s)	1457
PspFI	CCCAGC	1 cut(s)	37
PspGI	CCWGG	1 cut(s)	1669
PspN4I	GGNNCC	5 cut(s)	684, 1434, 2028, 2271, 2336
PspPI	GGNCC	6 cut(s)	242, 389, 1632, 1982, 2027, 2334
PspPPI	RGGWCCY	1 cut(s)	2027
PsrI	GAACNNNNNNTAC	2 cut(s)	356, 388
PstI	CTGCAG	2 cut(s)	618, 2035
PstNI	CAGNNNCTG	3 cut(s)	289, 568, 770
PsuI	RGATCY	4 cut(s)	299, 1926, 1945, 1957
PvuII	CAGCTG	2 cut(s)	977, 1454
RsaI	GTAC	6 cut(s)	365, 984, 1006, 1514, 2291, 2345
RsaNI	GTAC	6 cut(s)	364, 983, 1005, 1513, 2290, 2344
RseI	CAYNNNNRTG	4 cut(s)	63, 453, 548, 1128
SacI	GAGCTC	3 cut(s)	1427, 1468, 1941
SacII	CCGCGG	1 cut(s)	1638
SaqAI	TTAA	5 cut(s)	818, 1068, 1119, 2097, 2145
Sau3AI	GATC	9 cut(s)	299, 949, 1735, 1823, 1847, 1926, 1945, 1957, 2260
Sau96I	GGNCC	6 cut(s)	242, 389, 1632, 1982, 2027, 2334
SchI	GAGTC	4 cut(s)	479, 481, 904, 2200
ScrFI	CCNGG	3 cut(s)	225, 847, 1671
SduI	GDGCHC	4 cut(s)	555, 1427, 1468, 1941
SfaNI	GCATC	3 cut(s)	1021, 1683, 1740
SfcI	CTRYAG	2 cut(s)	614, 2031
Sfr303I	CCGCGG	1 cut(s)	1638
SgrBI	CCGCGG	1 cut(s)	1638
SinI	GGWCC	3 cut(s)	1632, 2027, 2334
SmiMI	CAYNNNNRTG	4 cut(s)	63, 453, 548, 1128
SmlI	CTYRAG	3 cut(s)	817, 1142, 1940
SmoI	CTYRAG	3 cut(s)	817, 1142, 1940
Sse9I	AATT	7 cut(s)	136, 534, 571, 667, 753, 1245, 1880
SsiI	CCGC	9 cut(s)	240, 251, 767, 1635, 1637, 1786, 1856, 1859, 1924
SspI	AATATT	2 cut(s)	1023, 1117
SspMI	CTAG	2 cut(s)	749, 2356
SstI	GAGCTC	3 cut(s)	1427, 1468, 1941
StyD4I	CCNGG	3 cut(s)	223, 845, 1669
StyI	CCWWGG	2 cut(s)	1339, 2349
TaaI	ACNGT	4 cut(s)	1226, 1383, 2039, 2187
TaiI	ACGT	2 cut(s)	1350, 1782
TaqI	TCGA	6 cut(s)	473, 890, 1536, 1677, 2210, 2225
TaqII	GACCGA	1 cut(s)	2312
TasI	AATT	7 cut(s)	136, 534, 571, 667, 753, 1245, 1880
TatI	WGTACW	2 cut(s)	1512, 2289
TauI	GCSGC	3 cut(s)	243, 770, 1861
TfiI	GAWTC	7 cut(s)	16, 55, 228, 286, 505, 1299, 1801
Tru1I	TTAA	5 cut(s)	818, 1068, 1119, 2097, 2145
Tru9I	TTAA	5 cut(s)	818, 1068, 1119, 2097, 2145
TscAI	CASTG	7 cut(s)	193, 639, 1434, 1552, 2012, 2192, 2326
TseFI	GTSAC	3 cut(s)	178, 1474, 2065
TseI	GCWGC	8 cut(s)	764, 1093, 1289, 1451, 1493, 1783, 1974, 2157
Tsp45I	GTSAC	3 cut(s)	178, 1474, 2065
TspDTI	ATGAA	3 cut(s)	47, 1140, 1598
TspRI	CASTG	7 cut(s)	193, 639, 1434, 1552, 2012, 2192, 2326
Van91I	CCANNNNNTGG	2 cut(s)	1814, 1868
Vha464I	CTTAAG	1 cut(s)	817
VpaK11BI	GGWCC	3 cut(s)	1632, 2027, 2334
VspI	ATTAAT	1 cut(s)	2145
XapI	RAATTY	3 cut(s)	534, 571, 1245
XceI	RCATGY	2 cut(s)	798, 2002
XcmI	CCANNNNNNNNNTGG	2 cut(s)	433, 1571
XspI	CTAG	2 cut(s)	749, 2356
Zsp2I	ATGCAT	1 cut(s)	946

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.