Rorug07G0024900
NAC Family

inactive receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
1791995 .. 1794100
2106 bp
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UTR
Exon/CDS
Intron
Rorug07G0024900.1

Sequence Viewer

Length: 288 bp
ATGGCGTTCCTGCTCAAAAATTCCGTCGCTTCACATTTCCGTCAGACGACGAAGAACGATTCACTTTCCCTCACGCGCCGCCAGTTCCACGTCGAACCTGGGGCTCGCGAGAAAGCTCTCTTGGCACCGGACCCGTCTCTCCGACGATTCAAGTCGCATAAGGGAGGAGTGTTGGCGATCAAAAGGATTGGGGAGGTTCTCACAGTTGTTGTTATTGCTGGTTGCTGCTATGAAATATATGTAAAAGCAGTGATGCGGGAGGAGGCTAGGGCACAGACAAAGGCTTGA
Functional Annotation

Protein Analysis

95

Amino Acids

10.61

Weight (kDa)

10.17

Isoelectric Point (pI)

39.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 124
AccII CGCG 2 cut(s) 76, 108
AciI CCGC 2 cut(s) 79, 256
AcsI RAATTY 1 cut(s) 19
AgsI TTSAA 1 cut(s) 151
AjiI CACGTC 1 cut(s) 91
AjnI CCWGG 1 cut(s) 97
AjuI GAANNNNNNNTTGG 2 cut(s) 104, 136
AluBI AGCT 1 cut(s) 116
AluI AGCT 1 cut(s) 116
Alw26I GTCTC 1 cut(s) 141
ApeKI GCWGC 1 cut(s) 225
ApoI RAATTY 1 cut(s) 19
ArsI GACNNNNNNTTYG 2 cut(s) 9, 41
AspLEI GCGC 1 cut(s) 78
AspS9I GGNCC 1 cut(s) 130
AvaII GGWCC 1 cut(s) 130
BaeGI GKGCMC 1 cut(s) 274
BanI GGYRCC 1 cut(s) 124
BanII GRGCYC 1 cut(s) 106
BbvI GCAGC 1 cut(s) 212
BciT130I CCWGG 1 cut(s) 99
BcoDI GTCTC 1 cut(s) 141
BfaI CTAG 1 cut(s) 267
BisI GCNGC 2 cut(s) 79, 226
BlsI GCNGC 2 cut(s) 80, 227
Bme1390I CCNGG 1 cut(s) 99
Bme18I GGWCC 1 cut(s) 130
BmgBI CACGTC 1 cut(s) 91
BmgT120I GGNCC 1 cut(s) 130
BmiI GGNNCC 2 cut(s) 126, 132
BmrFI CCNGG 1 cut(s) 99
BmsI GCATC 1 cut(s) 243
BsaJI CCNNGG 1 cut(s) 98
BsaWI WCCGGW 1 cut(s) 127
Bse1I ACTGG 1 cut(s) 82
BseBI CCWGG 1 cut(s) 99
BseDI CCNNGG 1 cut(s) 98
BseNI ACTGG 1 cut(s) 82
BseRI GAGGAG 2 cut(s) 180, 275
BseSI GKGCMC 1 cut(s) 274
BseXI GCAGC 1 cut(s) 212
Bsh1236I CGCG 2 cut(s) 76, 108
BshNI GGYRCC 1 cut(s) 124
BsiSI CCGG 1 cut(s) 128
BsmAI GTCTC 1 cut(s) 141
BsmBI CGTCTC 1 cut(s) 141
Bsp1286I GDGCHC 2 cut(s) 106, 274
Bsp143I GATC 1 cut(s) 177
Bsp68I TCGCGA 1 cut(s) 108
BspACI CCGC 2 cut(s) 79, 256
BspFNI CGCG 2 cut(s) 76, 108
BspLI GGNNCC 2 cut(s) 126, 132
BspT107I GGYRCC 1 cut(s) 124
BsrI ACTGG 1 cut(s) 82
BssECI CCNNGG 1 cut(s) 98
BssMI GATC 1 cut(s) 177
Bst2UI CCWGG 1 cut(s) 99
Bst4CI ACNGT 1 cut(s) 205
BstC8I GCNNGC 1 cut(s) 106
BstFNI CGCG 2 cut(s) 76, 108
BstHHI GCGC 1 cut(s) 78
BstKTI GATC 1 cut(s) 180
BstMAI GTCTC 1 cut(s) 141
BstMBI GATC 1 cut(s) 177
BstMWI GCNNNNNNNGC 1 cut(s) 122
BstNI CCWGG 1 cut(s) 99
BstSCI CCNGG 1 cut(s) 97
BstSLI GKGCMC 1 cut(s) 274
BstUI CGCG 2 cut(s) 76, 108
BstV1I GCAGC 1 cut(s) 212
BtrI CACGTC 1 cut(s) 91
BtsI GCAGTG 1 cut(s) 255
BtsIMutI CAGTG 1 cut(s) 255
BtuMI TCGCGA 1 cut(s) 108
Cac8I GCNNGC 1 cut(s) 106
CfoI GCGC 1 cut(s) 78
Cfr13I GGNCC 1 cut(s) 130
CviJI RGCY 4 cut(s) 104, 116, 266, 284
CviKI_1 RGCY 4 cut(s) 104, 116, 266, 284
DpnI GATC 1 cut(s) 179
DpnII GATC 1 cut(s) 177
Eco24I GRGCYC 1 cut(s) 106
Eco47I GGWCC 1 cut(s) 130
EcoRII CCWGG 1 cut(s) 97
EcoT38I GRGCYC 1 cut(s) 106
Esp3I CGTCTC 1 cut(s) 141
FaiI YATR 4 cut(s) 159, 231, 238, 240
FauI CCCGC 1 cut(s) 249
Fnu4HI GCNGC 2 cut(s) 79, 226
FriOI GRGCYC 1 cut(s) 106
Fsp4HI GCNGC 2 cut(s) 79, 226
FspBI CTAG 1 cut(s) 267
GlaI GCGC 1 cut(s) 77
GluI GCNGC 2 cut(s) 79, 226
HapII CCGG 1 cut(s) 128
HhaI GCGC 1 cut(s) 78
Hin6I GCGC 1 cut(s) 76
HinP1I GCGC 1 cut(s) 76
HinfI GANTC 2 cut(s) 59, 147
HpaII CCGG 1 cut(s) 128
Hpy188I TCNGA 2 cut(s) 45, 143
Hpy188III TCNNGA 1 cut(s) 107
Hpy99I CGWCG 4 cut(s) 29, 52, 95, 147
HpyCH4III ACNGT 1 cut(s) 205
HpyCH4IV ACGT 1 cut(s) 90
HpyF10VI GCNNNNNNNGC 1 cut(s) 122
HpySE526I ACGT 1 cut(s) 90
HspAI GCGC 1 cut(s) 76
Kzo9I GATC 1 cut(s) 177
LpnPI CCDG 6 cut(s) 23, 84, 95, 111, 141, 204
Lsp1109I GCAGC 1 cut(s) 212
LweI GCATC 1 cut(s) 243
MaeI CTAG 1 cut(s) 267
MaeII ACGT 1 cut(s) 90
MalI GATC 1 cut(s) 179
MboI GATC 1 cut(s) 177
MboII GAAGA 1 cut(s) 64
MhlI GDGCHC 2 cut(s) 106, 274
MluCI AATT 1 cut(s) 19
MmeI TCCRAC 1 cut(s) 166
MnlI CCTC 5 cut(s) 80, 158, 187, 253, 256
MspI CCGG 1 cut(s) 128
MspR9I CCNGG 1 cut(s) 99
MvaI CCWGG 1 cut(s) 99
MvnI CGCG 2 cut(s) 76, 108
MwoI GCNNNNNNNGC 1 cut(s) 122
NdeII GATC 1 cut(s) 177
NlaIV GGNNCC 2 cut(s) 126, 132
NruI TCGCGA 1 cut(s) 108
PfeI GAWTC 2 cut(s) 59, 147
PkrI GCNGC 2 cut(s) 80, 227
Psp6I CCWGG 1 cut(s) 97
PspGI CCWGG 1 cut(s) 97
PspN4I GGNNCC 2 cut(s) 126, 132
PspPI GGNCC 1 cut(s) 130
RruI TCGCGA 1 cut(s) 108
SatI GCNGC 2 cut(s) 79, 226
Sau3AI GATC 1 cut(s) 177
Sau96I GGNCC 1 cut(s) 130
ScrFI CCNGG 1 cut(s) 99
SduI GDGCHC 2 cut(s) 106, 274
SetI ASST 4 cut(s) 93, 100, 118, 198
SfaNI GCATC 1 cut(s) 243
SinI GGWCC 1 cut(s) 130
Sse9I AATT 1 cut(s) 19
SsiI CCGC 2 cut(s) 79, 256
SspMI CTAG 1 cut(s) 267
StyD4I CCNGG 1 cut(s) 97
TaaI ACNGT 1 cut(s) 205
TaiI ACGT 1 cut(s) 93
TaqI TCGA 1 cut(s) 93
TasI AATT 1 cut(s) 19
TauI GCSGC 1 cut(s) 81
TfiI GAWTC 2 cut(s) 59, 147
TscAI CASTG 1 cut(s) 255
TseI GCWGC 1 cut(s) 225
TspDTI ATGAA 1 cut(s) 246
TspGWI ACGGA 2 cut(s) 13, 29
TspRI CASTG 1 cut(s) 255
VpaK11BI GGWCC 1 cut(s) 130
XapI RAATTY 1 cut(s) 19
XcmI CCANNNNNNNNNTGG 1 cut(s) 95
XspI CTAG 1 cut(s) 267
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.