Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000100.1

Orthogroup ID

OG0018515

Physical Location & Seq

Genomic Coordinates Forward (+)

53113 .. 55122

Gene Structure 2010 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000100.1_g000015.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

atgcaaagtgacactgccactaagttaagtaccgagggagatgcttcaatcggcaacgaccaaatcctacacctcaccaatgcggatcaatcacaaacagagagcatcggccgagtctcttaccgtgaacccttcctcctgcggcaaaataccacaggaaaactggctgatttcaccacaaacttcacctttgtcatcaatcctccagacaacggtggctacgggctcgtgttcttcctggcgccaaatgggtccttactcgacagggaactagggaaaggtggcagtatgggactccctgtcaacagcacaatggaaaaccctatccgccctgagtatgcctttgtggcggtggagtttgatacctaccagaatcaagagccgaccgtccaagaccccctcggccaacatataggtatagacgtcaactccttagattctactgcttaccagaagtggaataaatttaatgggggtactaatactatgatggctcaacaaaacagtgctacgattagttatgattccgtctcaaaaaatcttagtgtttccttaattactagttatgtactcgagggtacacctgcatctatgaaaacgagctctaatctgtatctcatagttgatctggaaaaatacttgccgggtagggttattgttgggttctcagctgcaacagatagtaatactttccataacataatctcatggaattttacttcaactttacttgttgatcctgagcctctacctccttctagtccacaagtaccggtgagtccaaataaggcacctgcatctctaactacctctggccaagcaagccaaaatcaagctcaaattccttccccaggtcctagttctatagccaagtcgaaaaagcaaaataccctggtactaatagcagctgcaatttttagtactataggtgtatttttcttgctcggaggtttcatttggttcatcttttggatcaagaatagagcaccaggagaaagtaatactgatgaacatcctatgattcgagacccgacagacgagcaattcggaagggagactggtccccggcagttctcctatagggagttggaagtggcaacgggtaacttttctgatgaaaacaagctcggacatggaggtttcggtgacgtttacaaaggcttcttaaatagctcgaactgtgatgttgctgttaagaagatattgaagaattctgaccaagggccaagggagtatggagcagaaataagaatcctcagttcgcttaggcatcggaatcttgtgcaactccttggttggtgccacgaaaaagaaatgcttcttgtttacgagttcatgcccaatggcagtttagattctcatctgttcaaaggaggaagcttgttaagttgggagatcagatacagaattgctcaaggcttggcatctgtgttgatgtatatacaacacgaatgggaccaatttgtggtgcacagggatatcaaatctagtaacattatgttggattcaaagttcagtccaaaactcggagattttgggttagctcgatttgttgaccacgacaaatcctcgaaaacaacaattgttgctggaactagagggtatatggctccagaatatattactgaaaacaaggcgagtaagcatacggatatcttcagcttcggagttgttgccttggaaatagcatgtgggagaaaaccctttgatcacaggttgggacgtgataaattcaatatggtggagtgggtttgggaactttacaaaggagggaacgtcattgaagcagctgatccgaaactgggtgtgacttatgataggaggcagatggagcgtttgttgattgttgggttgtggtgttctcatccagaaaaaagtacacggcctggaatagaacaagtgattgatgtgcttaacttcaaagacgtacacccatttcctaatattccagcacctgcagagagttctatttatcttactagttctgatgaataccagatcgagtcttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002229 GO:0002239 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009893 GO:0010310 GO:0010726 GO:0010941 GO:0010942 GO:0016020 GO:0019222 GO:0031323 GO:0031325 GO:0043207 GO:0044464 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051193 GO:0051194 GO:0051704 GO:0051707 GO:0065007 GO:0071944 GO:0098542 GO:2000377 GO:2000379

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Lectin_legB Pkinase Pkinase_Tyr

Protein Analysis

669

Amino Acids

74.24

Weight (kDa)

5.6

Isoelectric Point (pI)

35.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0018515)

Species	Orthologous Gene IDs
malus_domestica	MD11G1254600.v1.1
pyrus_communis	pycom11g22540
rosa_multiflora	Rmu_ssc0000100.1_g000015
rosa_roxburghii	Rroxscaffold_1G00047530 Rroxscaffold_1G00047560 Rroxscaffold_1G00047710 Rroxscaffold_1G00047960
rosa_rugosa	Rorug05G0132300 Rorug05G0132500
rosa_wichuraiana	Rw5G020580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	3 cut(s)	592, 802, 1963
AatII	GACGTC	1 cut(s)	426
Acc36I	ACCTGC	3 cut(s)	592, 802, 1963
AccB1I	GGYRCC	3 cut(s)	241, 790, 1299
AccB7I	CCANNNNNTGG	1 cut(s)	1465
AciI	CCGC	4 cut(s)	83, 142, 328, 350
AclWI	GGATC	4 cut(s)	93, 731, 980, 1787
AcoI	YGGCCR	3 cut(s)	109, 403, 814
AcsI	RAATTY	5 cut(s)	464, 712, 840, 1210, 1730
AcuI	CTGAAG	1 cut(s)	1642
AcyI	GRCGYC	2 cut(s)	242, 423
AfaI	GTAC	9 cut(s)	31, 478, 570, 580, 771, 897, 922, 1879, 1929
AfiI	CCNNNNNNNGG	5 cut(s)	212, 851, 1465, 1526, 1802
AgeI	ACCGGT	1 cut(s)	772
AgsI	TTSAA	8 cut(s)	48, 723, 1207, 1369, 1509, 1735, 1784, 1921
AhdI	GACNNNNNGTC	1 cut(s)	299
AhlI	ACTAGT	2 cut(s)	560, 1979
AjiI	CACGTC	1 cut(s)	1724
AjnI	CCWGG	5 cut(s)	237, 850, 891, 988, 1885
AloI	GAACNNNNNNTCC	4 cut(s)	120, 152, 1496, 1528
Alw21I	GWGCWC	3 cut(s)	605, 988, 1473
Alw26I	GTCTC	4 cut(s)	121, 535, 1020, 1049
Alw44I	GTGCAC	1 cut(s)	1469
AlwI	GGATC	4 cut(s)	93, 731, 980, 1787
AlwNI	CAGNNNCTG	1 cut(s)	1955
Ama87I	CYCGRG	1 cut(s)	572
AoxI	GGCC	5 cut(s)	109, 403, 814, 1223, 1883
ApaLI	GTGCAC	1 cut(s)	1469
ApeKI	GCWGC	4 cut(s)	671, 905, 908, 1787
ApoI	RAATTY	5 cut(s)	464, 712, 840, 1210, 1730
ArsI	GACNNNNNNTTYG	2 cut(s)	1028, 1060
AsiGI	ACCGGT	1 cut(s)	772
Asp700I	GAANNNNTTC	1 cut(s)	1317
AspLEI	GCGC	1 cut(s)	244
AspS9I	GGNCC	5 cut(s)	252, 854, 1061, 1223, 1456
AsuC2I	CCSGG	2 cut(s)	645, 1066
AsuHPI	GGTGA	5 cut(s)	67, 166, 178, 787, 1157
AvaI	CYCGRG	1 cut(s)	572
AvaII	GGWCC	4 cut(s)	252, 854, 1061, 1456
BaeGI	GKGCMC	1 cut(s)	1473
BalI	TGGCCA	1 cut(s)	816
BanI	GGYRCC	3 cut(s)	241, 790, 1299
BanII	GRGCYC	2 cut(s)	228, 605
BauI	CACGAG	1 cut(s)	227
Bbv12I	GWGCWC	3 cut(s)	605, 988, 1473
BbvI	GCAGC	4 cut(s)	658, 895, 917, 1799
BccI	CCATC	2 cut(s)	484, 1822
BceAI	ACGGC	1 cut(s)	1898
BcgI	CGANNNNNNTGC	2 cut(s)	23, 57
BciT130I	CCWGG	5 cut(s)	239, 852, 893, 990, 1887
BclI	TGATCA	1 cut(s)	1708
BcnI	CCSGG	2 cut(s)	645, 1066
BcoDI	GTCTC	4 cut(s)	121, 535, 1020, 1049
BcuI	ACTAGT	2 cut(s)	560, 1979
BfaI	CTAG	7 cut(s)	272, 561, 759, 858, 1488, 1596, 1980
BfmI	CTRYAG	4 cut(s)	864, 924, 1078, 1956
BfoI	RGCGCY	1 cut(s)	245
BfuAI	ACCTGC	3 cut(s)	592, 802, 1963
BglI	GCCNNNNNGGC	1 cut(s)	347
BisI	GCNGC	5 cut(s)	143, 672, 906, 909, 1788
BlsI	GCNGC	5 cut(s)	144, 673, 907, 910, 1789
BmcAI	AGTACT	1 cut(s)	922
Bme1390I	CCNGG	7 cut(s)	239, 645, 852, 893, 990, 1066, 1887
Bme18I	GGWCC	4 cut(s)	252, 854, 1061, 1456
BmeRI	GACNNNNNGTC	1 cut(s)	299
BmeT110I	CYCGRG	1 cut(s)	572
BmgBI	CACGTC	1 cut(s)	1724
BmgT120I	GGNCC	5 cut(s)	252, 854, 1061, 1223, 1456
BmiI	GGNNCC	7 cut(s)	243, 253, 792, 1063, 1301, 1457, 1611
BmrFI	CCNGG	7 cut(s)	239, 645, 852, 893, 990, 1066, 1887
BmrI	ACTGGG	1 cut(s)	1811
BmsI	GCATC	6 cut(s)	31, 114, 596, 806, 1279, 1433
BmuI	ACTGGG	1 cut(s)	1811
BpmI	CTGGAG	2 cut(s)	189, 1596
Bpu10I	CCTNAGC	2 cut(s)	741, 1265
BpuEI	CTTGAG	1 cut(s)	1398
BpuMI	CCSGG	2 cut(s)	645, 1066
BsaBI	GATNNNNATC	2 cut(s)	1011, 1359
BsaHI	GRCGYC	2 cut(s)	242, 423
BsaI	GGTCTC	1 cut(s)	1020
BsaJI	CCNNGG	9 cut(s)	33, 400, 850, 891, 1064, 1219, 1226, 1291, 1677
BsaWI	WCCGGW	1 cut(s)	772
BsaXI	ACNNNNNCTCC	8 cut(s)	120, 150, 413, 443, 1761, 1791, 1823, 1853
Bsc4I	CCNNNNNNNGG	5 cut(s)	212, 851, 1465, 1526, 1802
Bse118I	RCCGGY	1 cut(s)	772
Bse1I	ACTGG	3 cut(s)	168, 1063, 1806
Bse8I	GATNNNNATC	2 cut(s)	1011, 1359
BseBI	CCWGG	5 cut(s)	239, 852, 893, 990, 1887
BseDI	CCNNGG	9 cut(s)	33, 400, 850, 891, 1064, 1219, 1226, 1291, 1677
BseGI	GGATG	2 cut(s)	1012, 1864
BseJI	GATNNNNATC	2 cut(s)	1011, 1359
BseLI	CCNNNNNNNGG	5 cut(s)	212, 851, 1465, 1526, 1802
BseMII	CTCAG	4 cut(s)	324, 681, 732, 1270
BseNI	ACTGG	3 cut(s)	168, 1063, 1806
BseSI	GKGCMC	1 cut(s)	1473
BseX3I	CGGCCG	1 cut(s)	109
BseXI	GCAGC	4 cut(s)	658, 895, 917, 1799
Bsh1285I	CGRYCG	2 cut(s)	112, 387
BshFI	GGCC	5 cut(s)	111, 405, 816, 1225, 1885
BshNI	GGYRCC	3 cut(s)	241, 790, 1299
BshTI	ACCGGT	1 cut(s)	772
BsiEI	CGRYCG	2 cut(s)	112, 387
BsiHKAI	GWGCWC	3 cut(s)	605, 988, 1473
BsiHKCI	CYCGRG	1 cut(s)	572
BsiSI	CCGG	3 cut(s)	644, 773, 1066
BslFI	GGGAC	4 cut(s)	306, 1047, 1469, 1734
BslI	CCNNNNNNNGG	5 cut(s)	212, 851, 1465, 1526, 1802
BsmAI	GTCTC	4 cut(s)	121, 535, 1020, 1049
BsmBI	CGTCTC	1 cut(s)	535
BsmFI	GGGAC	4 cut(s)	306, 1047, 1469, 1734
BsnI	GGCC	5 cut(s)	111, 405, 816, 1225, 1885
Bso31I	GGTCTC	1 cut(s)	1020
BsoBI	CYCGRG	1 cut(s)	572
Bsp1286I	GDGCHC	4 cut(s)	228, 605, 988, 1473
Bsp143I	GATC	8 cut(s)	85, 625, 736, 972, 1395, 1708, 1792, 1998
BspACI	CCGC	4 cut(s)	83, 142, 328, 350
BspANI	GGCC	5 cut(s)	111, 405, 816, 1225, 1885
BspCNI	CTCAG	4 cut(s)	325, 680, 733, 1269
BspLI	GGNNCC	7 cut(s)	243, 253, 792, 1063, 1301, 1457, 1611
BspMAI	CTGCAG	1 cut(s)	1960
BspMI	ACCTGC	3 cut(s)	592, 802, 1963
BspPI	GGATC	4 cut(s)	93, 731, 980, 1787
BspT107I	GGYRCC	3 cut(s)	241, 790, 1299
BspTNI	GGTCTC	1 cut(s)	1020
BsrFI	RCCGGY	1 cut(s)	772
BsrI	ACTGG	3 cut(s)	168, 1063, 1806
BssAI	RCCGGY	1 cut(s)	772
BssECI	CCNNGG	9 cut(s)	33, 400, 850, 891, 1064, 1219, 1226, 1291, 1677
BssMI	GATC	8 cut(s)	85, 625, 736, 972, 1395, 1708, 1792, 1998
BssNI	GRCGYC	2 cut(s)	242, 423
BssSI	CACGAG	1 cut(s)	227
BssT1I	CCWWGG	4 cut(s)	1219, 1226, 1291, 1677
Bst2BI	CACGAG	1 cut(s)	227
Bst2UI	CCWGG	5 cut(s)	239, 852, 893, 990, 1887
Bst4CI	ACNGT	5 cut(s)	125, 215, 388, 506, 1181
BstACI	GRCGYC	2 cut(s)	242, 423
BstC8I	GCNNGC	1 cut(s)	823
BstDEI	CTNAG	8 cut(s)	21, 333, 433, 542, 667, 741, 1256, 1265
BstENI	CCTNNNNNAGG	1 cut(s)	849
BstF5I	GGATG	2 cut(s)	1012, 1864
BstH2I	RGCGCY	1 cut(s)	245
BstHHI	GCGC	1 cut(s)	244
BstKTI	GATC	8 cut(s)	88, 628, 739, 975, 1398, 1711, 1795, 2001
BstMAI	GTCTC	4 cut(s)	121, 535, 1020, 1049
BstMBI	GATC	8 cut(s)	85, 625, 736, 972, 1395, 1708, 1792, 1998
BstMCI	CGRYCG	2 cut(s)	112, 387
BstMWI	GCNNNNNNNGC	3 cut(s)	347, 822, 1831
BstNI	CCWGG	5 cut(s)	239, 852, 893, 990, 1887
BstNSI	RCATGY	1 cut(s)	1692
BstSCI	CCNGG	7 cut(s)	237, 643, 850, 891, 988, 1064, 1885
BstSFI	CTRYAG	4 cut(s)	864, 924, 1078, 1956
BstSLI	GKGCMC	1 cut(s)	1473
BstV1I	GCAGC	4 cut(s)	658, 895, 917, 1799
BstZI	CGGCCG	1 cut(s)	109
BsuRI	GGCC	5 cut(s)	111, 405, 816, 1225, 1885
BtrI	CACGTC	1 cut(s)	1724
BtsCI	GGATG	2 cut(s)	1012, 1864
BtsI	GCAGTG	1 cut(s)	12
BtsIMutI	CAGTG	2 cut(s)	12, 511
BveI	ACCTGC	3 cut(s)	592, 802, 1963
Cac8I	GCNNGC	1 cut(s)	823
CaiI	CAGNNNCTG	1 cut(s)	1955
CfoI	GCGC	1 cut(s)	244
Cfr10I	RCCGGY	1 cut(s)	772
Cfr13I	GGNCC	5 cut(s)	252, 854, 1061, 1223, 1456
Csp6I	GTAC	9 cut(s)	30, 477, 569, 579, 770, 896, 921, 1878, 1928
CspAI	ACCGGT	1 cut(s)	772
CviAII	CATG	4 cut(s)	708, 1133, 1336, 1689
CviQI	GTAC	9 cut(s)	30, 477, 569, 579, 770, 896, 921, 1878, 1928
DdeI	CTNAG	8 cut(s)	21, 333, 433, 542, 667, 741, 1256, 1265
DinI	GGCGCC	1 cut(s)	243
DpnI	GATC	8 cut(s)	87, 627, 738, 974, 1397, 1710, 1794, 2000
DpnII	GATC	8 cut(s)	85, 625, 736, 972, 1395, 1708, 1792, 1998
DriI	GACNNNNNGTC	1 cut(s)	299
EaeI	YGGCCR	3 cut(s)	109, 403, 814
EagI	CGGCCG	1 cut(s)	109
Eam1105I	GACNNNNNGTC	1 cut(s)	299
EciI	GGCGGA	1 cut(s)	317
Ecl136II	GAGCTC	1 cut(s)	603
EclXI	CGGCCG	1 cut(s)	109
Eco130I	CCWWGG	4 cut(s)	1219, 1226, 1291, 1677
Eco24I	GRGCYC	2 cut(s)	228, 605
Eco31I	GGTCTC	1 cut(s)	1020
Eco32I	GATATC	2 cut(s)	1480, 1654
Eco47I	GGWCC	4 cut(s)	252, 854, 1061, 1456
Eco52I	CGGCCG	1 cut(s)	109
Eco53kI	GAGCTC	1 cut(s)	603
Eco57I	CTGAAG	1 cut(s)	1642
Eco88I	CYCGRG	1 cut(s)	572
EcoICRI	GAGCTC	1 cut(s)	603
EcoNI	CCTNNNNNAGG	1 cut(s)	849
EcoO109I	RGGNCCY	2 cut(s)	252, 854
EcoRI	GAATTC	1 cut(s)	1210
EcoRII	CCWGG	5 cut(s)	237, 850, 891, 988, 1885
EcoRV	GATATC	2 cut(s)	1480, 1654
EcoT14I	CCWWGG	4 cut(s)	1219, 1226, 1291, 1677
EcoT38I	GRGCYC	2 cut(s)	228, 605
EgeI	GGCGCC	1 cut(s)	243
EheI	GGCGCC	1 cut(s)	243
ErhI	CCWWGG	4 cut(s)	1219, 1226, 1291, 1677
Esp3I	CGTCTC	1 cut(s)	535
FaeI	CATG	4 cut(s)	711, 1136, 1339, 1692
FalI	AAGNNNNNCTT	2 cut(s)	1302, 1334
FaqI	GGGAC	4 cut(s)	306, 1047, 1469, 1734
FatI	CATG	4 cut(s)	707, 1132, 1335, 1688
FbaI	TGATCA	1 cut(s)	1708
Fnu4HI	GCNGC	5 cut(s)	143, 672, 906, 909, 1788
FokI	GGATG	2 cut(s)	999, 1851
FriOI	GRGCYC	2 cut(s)	228, 605
Fsp4HI	GCNGC	5 cut(s)	143, 672, 906, 909, 1788
FspBI	CTAG	7 cut(s)	272, 561, 759, 858, 1488, 1596, 1980
GlaI	GCGC	1 cut(s)	243
GluI	GCNGC	5 cut(s)	143, 672, 906, 909, 1788
GsuI	CTGGAG	2 cut(s)	189, 1596
HaeII	RGCGCY	1 cut(s)	245
HaeIII	GGCC	5 cut(s)	111, 405, 816, 1225, 1885
HapII	CCGG	3 cut(s)	644, 773, 1066
HhaI	GCGC	1 cut(s)	244
Hin1I	GRCGYC	2 cut(s)	242, 423
Hin1II	CATG	4 cut(s)	711, 1136, 1339, 1692
Hin6I	GCGC	1 cut(s)	242
HinP1I	GCGC	1 cut(s)	242
HincII	GTYRAC	3 cut(s)	304, 427, 1555
HindII	GTYRAC	3 cut(s)	304, 427, 1555
HindIII	AAGCTT	1 cut(s)	1378
HpaII	CCGG	3 cut(s)	644, 773, 1066
HphI	GGTGA	5 cut(s)	67, 166, 178, 787, 1157
Hpy188III	TCNNGA	9 cut(s)	206, 377, 629, 740, 976, 1025, 1613, 1868, 2007
HpyAV	CCTTC	4 cut(s)	142, 765, 855, 1044
HpyCH4III	ACNGT	5 cut(s)	125, 215, 388, 506, 1181
HpyCH4IV	ACGT	5 cut(s)	423, 1149, 1723, 1776, 1926
HpyCH4V	TGCA	8 cut(s)	4, 587, 674, 797, 911, 1285, 1471, 1958
HpyF10VI	GCNNNNNNNGC	3 cut(s)	347, 822, 1831
HpyF3I	CTNAG	8 cut(s)	21, 333, 433, 542, 667, 741, 1256, 1265
HpySE526I	ACGT	5 cut(s)	423, 1149, 1723, 1776, 1926
Hsp92I	GRCGYC	2 cut(s)	242, 423
Hsp92II	CATG	4 cut(s)	711, 1136, 1339, 1692
HspAI	GCGC	1 cut(s)	242
KasI	GGCGCC	1 cut(s)	241
Ksp22I	TGATCA	1 cut(s)	1708
Kzo9I	GATC	8 cut(s)	85, 625, 736, 972, 1395, 1708, 1792, 1998
LmnI	GCTCC	3 cut(s)	1238, 1615, 1831
Lsp1109I	GCAGC	4 cut(s)	658, 895, 917, 1799
LweI	GCATC	6 cut(s)	31, 114, 596, 806, 1279, 1433
MaeI	CTAG	7 cut(s)	272, 561, 759, 858, 1488, 1596, 1980
MaeII	ACGT	5 cut(s)	423, 1149, 1723, 1776, 1926
MaeIII	GTNAC	5 cut(s)	8, 1103, 1145, 1490, 1807
MalI	GATC	8 cut(s)	87, 627, 738, 974, 1397, 1710, 1794, 2000
MboI	GATC	8 cut(s)	85, 625, 736, 972, 1395, 1708, 1792, 1998
MboII	GAAGA	4 cut(s)	226, 1210, 1219, 1648
MfeI	CAATTG	1 cut(s)	1581
MhlI	GDGCHC	4 cut(s)	228, 605, 988, 1473
MlsI	TGGCCA	1 cut(s)	816
MluNI	TGGCCA	1 cut(s)	816
Mly113I	GGCGCC	1 cut(s)	242
MlyI	GAGTC	3 cut(s)	123, 288, 787
MmeI	TCCRAC	2 cut(s)	1068, 1482
Mox20I	TGGCCA	1 cut(s)	816
MroXI	GAANNNNTTC	1 cut(s)	1317
MscI	TGGCCA	1 cut(s)	816
MseI	TTAA	7 cut(s)	26, 468, 554, 1166, 1194, 1385, 1914
Msp20I	TGGCCA	1 cut(s)	816
MspA1I	CMGCKG	3 cut(s)	671, 908, 1790
MspI	CCGG	3 cut(s)	644, 773, 1066
MspR9I	CCNGG	7 cut(s)	239, 645, 852, 893, 990, 1066, 1887
MunI	CAATTG	1 cut(s)	1581
MvaI	CCWGG	5 cut(s)	239, 852, 893, 990, 1887
MwoI	GCNNNNNNNGC	3 cut(s)	347, 822, 1831
NarI	GGCGCC	1 cut(s)	242
NciI	CCSGG	2 cut(s)	645, 1066
NdeII	GATC	8 cut(s)	85, 625, 736, 972, 1395, 1708, 1792, 1998
NlaIII	CATG	4 cut(s)	711, 1136, 1339, 1692
NlaIV	GGNNCC	7 cut(s)	243, 253, 792, 1063, 1301, 1457, 1611
NmeAIII	GCCGAG	2 cut(s)	137, 381
NmuCI	GTSAC	3 cut(s)	8, 1145, 1807
NspI	RCATGY	1 cut(s)	1692
PaeR7I	CTCGAG	1 cut(s)	572
PaqCI	CACCTGC	3 cut(s)	592, 802, 1963
PdmI	GAANNNNTTC	1 cut(s)	1317
PfeI	GAWTC	8 cut(s)	373, 437, 524, 1021, 1251, 1276, 1355, 1505
PflMI	CCANNNNNTGG	1 cut(s)	1465
PinAI	ACCGGT	1 cut(s)	772
PkrI	GCNGC	5 cut(s)	144, 673, 907, 910, 1789
PleI	GAGTC	3 cut(s)	122, 288, 786
PluTI	GGCGCC	1 cut(s)	245
PpsI	GAGTC	3 cut(s)	122, 288, 786
PpuMI	RGGWCCY	2 cut(s)	252, 854
Psp124BI	GAGCTC	1 cut(s)	605
Psp5II	RGGWCCY	2 cut(s)	252, 854
Psp6I	CCWGG	5 cut(s)	237, 850, 891, 988, 1885
PspGI	CCWGG	5 cut(s)	237, 850, 891, 988, 1885
PspN4I	GGNNCC	7 cut(s)	243, 253, 792, 1063, 1301, 1457, 1611
PspPI	GGNCC	5 cut(s)	252, 854, 1061, 1223, 1456
PspPPI	RGGWCCY	2 cut(s)	252, 854
PspXI	VCTCGAGB	1 cut(s)	572
PstI	CTGCAG	1 cut(s)	1960
PstNI	CAGNNNCTG	1 cut(s)	1955
PvuII	CAGCTG	3 cut(s)	671, 908, 1790
RsaI	GTAC	9 cut(s)	31, 478, 570, 580, 771, 897, 922, 1879, 1929
RsaNI	GTAC	9 cut(s)	30, 477, 569, 579, 770, 896, 921, 1878, 1928
SacI	GAGCTC	1 cut(s)	605
SaqAI	TTAA	7 cut(s)	26, 468, 554, 1166, 1194, 1385, 1914
SatI	GCNGC	5 cut(s)	143, 672, 906, 909, 1788
Sau3AI	GATC	8 cut(s)	85, 625, 736, 972, 1395, 1708, 1792, 1998
Sau96I	GGNCC	5 cut(s)	252, 854, 1061, 1223, 1456
ScaI	AGTACT	1 cut(s)	922
SchI	GAGTC	3 cut(s)	123, 288, 787
ScrFI	CCNGG	7 cut(s)	239, 645, 852, 893, 990, 1066, 1887
SduI	GDGCHC	4 cut(s)	228, 605, 988, 1473
SfaNI	GCATC	6 cut(s)	31, 114, 596, 806, 1279, 1433
SfcI	CTRYAG	4 cut(s)	864, 924, 1078, 1956
SfoI	GGCGCC	1 cut(s)	243
Sfr274I	CTCGAG	1 cut(s)	572
SinI	GGWCC	4 cut(s)	252, 854, 1061, 1456
SlaI	CTCGAG	1 cut(s)	572
SmlI	CTYRAG	2 cut(s)	572, 1413
SmoI	CTYRAG	2 cut(s)	572, 1413
SpeI	ACTAGT	2 cut(s)	560, 1979
SsiI	CCGC	4 cut(s)	83, 142, 328, 350
SspDI	GGCGCC	1 cut(s)	241
SspI	AATATT	1 cut(s)	1945
SspMI	CTAG	7 cut(s)	272, 561, 759, 858, 1488, 1596, 1980
SstI	GAGCTC	1 cut(s)	605
StyD4I	CCNGG	7 cut(s)	237, 643, 850, 891, 988, 1064, 1885
StyI	CCWWGG	4 cut(s)	1219, 1226, 1291, 1677
TaaI	ACNGT	5 cut(s)	125, 215, 388, 506, 1181
TaiI	ACGT	5 cut(s)	426, 1152, 1726, 1779, 1929
TaqI	TCGA	8 cut(s)	261, 573, 875, 1024, 1175, 1546, 1571, 2001
TatI	WGTACW	3 cut(s)	568, 920, 1877
TauI	GCSGC	1 cut(s)	145
TfiI	GAWTC	8 cut(s)	373, 437, 524, 1021, 1251, 1276, 1355, 1505
Tru1I	TTAA	7 cut(s)	26, 468, 554, 1166, 1194, 1385, 1914
Tru9I	TTAA	7 cut(s)	26, 468, 554, 1166, 1194, 1385, 1914
TscAI	CASTG	2 cut(s)	19, 511
TseFI	GTSAC	3 cut(s)	8, 1145, 1807
TseI	GCWGC	4 cut(s)	671, 905, 908, 1787
Tsp45I	GTSAC	3 cut(s)	8, 1145, 1807
TspDTI	ATGAA	7 cut(s)	608, 943, 952, 1023, 1131, 1324, 2004
TspGWI	ACGGA	2 cut(s)	517, 1664
TspRI	CASTG	2 cut(s)	19, 511
Van91I	CCANNNNNTGG	1 cut(s)	1465
VneI	GTGCAC	1 cut(s)	1469
VpaK11BI	GGWCC	4 cut(s)	252, 854, 1061, 1456
XagI	CCTNNNNNAGG	1 cut(s)	849
XapI	RAATTY	5 cut(s)	464, 712, 840, 1210, 1730
XceI	RCATGY	1 cut(s)	1692
XcmI	CCANNNNNNNNNTGG	1 cut(s)	160
XhoI	CTCGAG	1 cut(s)	572
XmnI	GAANNNNTTC	1 cut(s)	1317
XspI	CTAG	7 cut(s)	272, 561, 759, 858, 1488, 1596, 1980
ZraI	GACGTC	1 cut(s)	424
ZrmI	AGTACT	1 cut(s)	922

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.