Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0018515

Physical Location & Seq

Genomic Coordinates Forward (+)

27124695 .. 27127201

Gene Structure 2507 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G020580.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2118 bp

ATGGAGTTTCATCACTTCCTTATTCATCTCATGACGAGATTACACGTCTTCCTTCTATTAACCACTACTGCAACTCCATTAACTTTCAATTTCTTCCCCTTCATGCAAAGTGACACCGCCACTAAGTTAAGTACCGAGGGAGATGCTTCAATCGGCAATGACCAAATCCTACACCTCACCAATGCGGATCAATCACAAACAGAGAGCATCGGCCGAGTCTCTTACCGTGAACCCTTCCTCCTGCGGCAAAATTCCACAGGAAAACTGGCTGATTTCACCACAAATTTCACCTTTGTCATCAATCCTCCAGACAACGGTGGCTACGGGCTCGTGTTCTTCCTGGCGCCAAATGGGTCCTTACTCGACAGGGAACTAGGGAAAGGTGGTAGTATGGGACTCCCTGTCAACAGCACAATGGAAAACCCTATCCGGCCAACCAATGAGTATGCCTTTGTGGCGGTGGAGTTTGATACCTACCAGAATCAAGAGCCGACCGTCCAAGACCCCCTCGGCGAACATATAGGTATAGACGTCAACTCCTTAGATTCTATTGCTACCCAGCATTGGAGTAAACTTAATGGGGGTACTAGTACTATGATGGCTCAACAAAACAGTGCTACGATTAGTTATGATTCCATCTCAAAAAATCTTAGTGTTTCCTTAATTACTAGTTATTTACTTGAGGGTACACCTGCAGCTATGAAAACGAGCACTAATCTGTATCACATAGTTGATCTGGAAAAATACTTGCCGGGTAGGGTCATTGTTGGGTTCTCAGCTGCAACAGATATTAATACTTTCCATAATATAATCTCATGGAATTTTACTTCAACTTTACTTGTTGATCCTGAGCCTCTACCTCCTTCTAGTCCACAAGTACCGGTGAGTCCAAATAAGGCACCTGCATCTCTAACTACCTCTGGCCAAGCAAGCCAAAATCAATCTCAAATTCCTTCCCCAGGTCCTAGTTCTATAGCCAAGTCGAAAAAGCAAAGTATCCTGGTACTAATAGCAGCTGCAATTTTTAGTACTATAGGTGTATTTTTCTTGCTCGGAGGTTTCATTTGGTTCATTTTTTGGATCAAGAATAGAGCACCAGGAGAAAGTAATACTGATGAACATCCTATGATTCGAGACCCGACAGACGAGCAATTCGGAAGGGAGACTGGCCCCCGGCAGTTCTCCTATATGGAGTTGGAAGTGGCAACGGGTAACTTTTCTGATGAAAACAAGCTCGGAGGTGGAGGTTTCGGTGACGTTTACAAAGGCTTCTTAAATAGCTCGAACTGTGATGTTGCTGTTAAGAAGATATTGAAGAATTCTGACCAAGGGCCAAGGGAGTATGGAGCAGAAATAAGAATCCTCAGTTCGCTTAGGCATCGGAATCTTGTGCAACTCCTTGGTTGGTGCCACGAAAAAGAAATGCTTCTTGTTTACGAGTTCATGCCCAGTGGCAGTTTAGATTCTCATCTGTTCAAAGGAGGAAGCTTGTTAAGTTGGGAGATCAGATACAGAATTGCTCAAGGCTTGGCATCTGTGTTGATGTATATACAACACGAATGGGACCAATATGTGGTGCACAGGGATATCAAATCTAGTAACATTATGTTGGATTCAAAGTTCAGTCCAAAACTTGGAGATTTTGGGTTAGCTCGATTTGTTGACCACGACAAATCCTCGAAAACAACAATTGTTGCTGGAACTAGAGGGTATATGGCTCCAGAATATATTACTGAAAACAAGGCGAGTAAGCATACGGATATCTTCAGCTTCGGAGTTGTTGCCTTGGAAATAGCATGCGGGAGAAAACCCTTTGATCACAGGTTGGGACGTGATAAATTCAATATGGTGGAGTGGGTTTGGGAACTTTACAAAGGAGGGAACGTCATTGAAGCAGCTGATCCGAAACTGGGTGTGACTTATGATAGGAGGCAGATGGAGCGTTTGTTGATTGTTGGGTTGTGGTGTTCTCATCCAGATAAAAGTACACGGCCTGGAATAGAACAAGTGATTGATGTGCTTAACTTCAAAGACGTACACCCATTTCCTAATATTCCAGCACCTGCAGAGAGTTCTATTTATCTTACTAGTTCTGATGAATACCAGATCGAGTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002229 GO:0002239 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009893 GO:0010310 GO:0010726 GO:0010941 GO:0010942 GO:0016020 GO:0019222 GO:0031323 GO:0031325 GO:0043207 GO:0044464 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051193 GO:0051194 GO:0051704 GO:0051707 GO:0065007 GO:0071944 GO:0098542 GO:2000377 GO:2000379

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Lectin_legB Pkinase Pkinase_Tyr

Protein Analysis

705

Amino Acids

78.38

Weight (kDa)

5.64

Isoelectric Point (pI)

36.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lectin_legB	PF00139	27 - 278	3.1e-55	Legume lectin domain
Lectin_L-type_dom	PF18483	37 - 262	1.6e-07	Legume lectin beta-barrel domain
Pkinase	PF00069	407 - 671	1.1e-48	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	409 - 616	1.9e-42	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0018515)

Species	Orthologous Gene IDs
malus_domestica	MD11G1254600.v1.1
pyrus_communis	pycom11g22540
rosa_multiflora	Rmu_ssc0000100.1_g000015
rosa_roxburghii	Rroxscaffold_1G00047530 Rroxscaffold_1G00047560 Rroxscaffold_1G00047710 Rroxscaffold_1G00047960
rosa_rugosa	Rorug05G0132300 Rorug05G0132500
rosa_wichuraiana	Rw5G020580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	3 cut(s)	700, 910, 2071
AatII	GACGTC	1 cut(s)	534
Acc36I	ACCTGC	3 cut(s)	700, 910, 2071
AccB1I	GGYRCC	3 cut(s)	343, 898, 1407
AccB7I	CCANNNNNTGG	2 cut(s)	1573, 1634
AciI	CCGC	5 cut(s)	117, 185, 244, 458, 1800
AclWI	GGATC	4 cut(s)	195, 839, 1088, 1895
AcoI	YGGCCR	3 cut(s)	211, 431, 922
AcsI	RAATTY	6 cut(s)	250, 283, 820, 948, 1318, 1838
AcuI	CTGAAG	1 cut(s)	1750
AcyI	GRCGYC	2 cut(s)	344, 531
AfaI	GTAC	9 cut(s)	133, 586, 592, 688, 879, 1005, 1030, 1987, 2037
AfiI	CCNNNNNNNGG	6 cut(s)	314, 564, 959, 1573, 1634, 1910
AflIII	ACRYGT	1 cut(s)	43
AgeI	ACCGGT	1 cut(s)	880
AgsI	TTSAA	9 cut(s)	88, 150, 831, 1315, 1477, 1617, 1843, 1892, 2029
AhdI	GACNNNNNGTC	1 cut(s)	401
AhlI	ACTAGT	3 cut(s)	587, 668, 2087
AjiI	CACGTC	2 cut(s)	46, 1832
AjnI	CCWGG	5 cut(s)	339, 958, 999, 1096, 1993
AloI	GAACNNNNNNTCC	4 cut(s)	222, 254, 1604, 1636
AluBI	AGCT	9 cut(s)	698, 779, 1016, 1234, 1281, 1488, 1652, 1770, 1898
AluI	AGCT	9 cut(s)	698, 779, 1016, 1234, 1281, 1488, 1652, 1770, 1898
Alw21I	GWGCWC	3 cut(s)	713, 1096, 1581
Alw26I	GTCTC	3 cut(s)	223, 1128, 1157
Alw44I	GTGCAC	1 cut(s)	1577
AlwI	GGATC	4 cut(s)	195, 839, 1088, 1895
AlwNI	CAGNNNCTG	1 cut(s)	2063
AoxI	GGCC	6 cut(s)	211, 431, 922, 1168, 1331, 1991
ApaLI	GTGCAC	1 cut(s)	1577
ApeKI	GCWGC	5 cut(s)	695, 779, 1013, 1016, 1895
ApoI	RAATTY	6 cut(s)	250, 283, 820, 948, 1318, 1838
ArsI	GACNNNNNNTTYG	2 cut(s)	1136, 1168
AseI	ATTAAT	1 cut(s)	792
AsiGI	ACCGGT	1 cut(s)	880
Asp700I	GAANNNNTTC	1 cut(s)	1425
AspLEI	GCGC	1 cut(s)	346
AspS9I	GGNCC	5 cut(s)	354, 962, 1169, 1331, 1564
AsuC2I	CCSGG	2 cut(s)	753, 1174
AsuHPI	GGTGA	5 cut(s)	169, 268, 280, 895, 1265
AvaII	GGWCC	3 cut(s)	354, 962, 1564
BaeGI	GKGCMC	1 cut(s)	1581
BalI	TGGCCA	1 cut(s)	924
BanI	GGYRCC	3 cut(s)	343, 898, 1407
BanII	GRGCYC	1 cut(s)	330
BauI	CACGAG	1 cut(s)	329
BbsI	GAAGAC	1 cut(s)	40
Bbv12I	GWGCWC	3 cut(s)	713, 1096, 1581
BbvI	GCAGC	5 cut(s)	707, 766, 1003, 1025, 1907
BccI	CCATC	3 cut(s)	592, 644, 1930
BceAI	ACGGC	1 cut(s)	2006
BcgI	CGANNNNNNTGC	2 cut(s)	125, 159
BciT130I	CCWGG	5 cut(s)	341, 960, 1001, 1098, 1995
BciVI	GTATCC	1 cut(s)	1007
BclI	TGATCA	1 cut(s)	1816
BcnI	CCSGG	2 cut(s)	753, 1174
BcoDI	GTCTC	3 cut(s)	223, 1128, 1157
BcuI	ACTAGT	3 cut(s)	587, 668, 2087
BfaI	CTAG	8 cut(s)	374, 588, 669, 867, 966, 1596, 1704, 2088
BfmI	CTRYAG	4 cut(s)	693, 972, 1032, 2064
BfoI	RGCGCY	1 cut(s)	347
BfuAI	ACCTGC	3 cut(s)	700, 910, 2071
BfuI	GTATCC	1 cut(s)	1007
BglI	GCCNNNNNGGC	1 cut(s)	455
BisI	GCNGC	6 cut(s)	245, 696, 780, 1014, 1017, 1896
BlsI	GCNGC	6 cut(s)	246, 697, 781, 1015, 1018, 1897
BmcAI	AGTACT	2 cut(s)	592, 1030
Bme1390I	CCNGG	7 cut(s)	341, 753, 960, 1001, 1098, 1174, 1995
Bme18I	GGWCC	3 cut(s)	354, 962, 1564
BmeRI	GACNNNNNGTC	1 cut(s)	401
BmgBI	CACGTC	2 cut(s)	46, 1832
BmgT120I	GGNCC	5 cut(s)	354, 962, 1169, 1331, 1564
BmiI	GGNNCC	7 cut(s)	345, 355, 900, 1171, 1409, 1565, 1719
BmrFI	CCNGG	7 cut(s)	341, 753, 960, 1001, 1098, 1174, 1995
BmrI	ACTGGG	2 cut(s)	1443, 1919
BmsI	GCATC	5 cut(s)	133, 216, 914, 1387, 1541
BmuI	ACTGGG	2 cut(s)	1443, 1919
BpiI	GAAGAC	1 cut(s)	40
BpmI	CTGGAG	2 cut(s)	291, 1704
Bpu10I	CCTNAGC	2 cut(s)	849, 1373
BpuEI	CTTGAG	2 cut(s)	701, 1506
BpuMI	CCSGG	2 cut(s)	753, 1174
BsaBI	GATNNNNATC	2 cut(s)	1119, 1467
BsaHI	GRCGYC	2 cut(s)	344, 531
BsaI	GGTCTC	1 cut(s)	1128
BsaJI	CCNNGG	8 cut(s)	135, 508, 958, 1172, 1327, 1334, 1399, 1785
BsaWI	WCCGGW	1 cut(s)	880
Bsc4I	CCNNNNNNNGG	6 cut(s)	314, 564, 959, 1573, 1634, 1910
Bse118I	RCCGGY	1 cut(s)	880
Bse1I	ACTGG	4 cut(s)	270, 1171, 1449, 1914
Bse3DI	GCAATG	1 cut(s)	163
Bse8I	GATNNNNATC	2 cut(s)	1119, 1467
BseBI	CCWGG	5 cut(s)	341, 960, 1001, 1098, 1995
BseDI	CCNNGG	8 cut(s)	135, 508, 958, 1172, 1327, 1334, 1399, 1785
BseGI	GGATG	2 cut(s)	1120, 1972
BseJI	GATNNNNATC	2 cut(s)	1119, 1467
BseLI	CCNNNNNNNGG	6 cut(s)	314, 564, 959, 1573, 1634, 1910
BseMI	GCAATG	1 cut(s)	163
BseMII	CTCAG	3 cut(s)	789, 840, 1378
BseNI	ACTGG	4 cut(s)	270, 1171, 1449, 1914
BseSI	GKGCMC	1 cut(s)	1581
BseX3I	CGGCCG	1 cut(s)	211
BseXI	GCAGC	5 cut(s)	707, 766, 1003, 1025, 1907
BseYI	CCCAGC	1 cut(s)	558
Bsh1285I	CGRYCG	2 cut(s)	214, 495
BshFI	GGCC	6 cut(s)	213, 433, 924, 1170, 1333, 1993
BshNI	GGYRCC	3 cut(s)	343, 898, 1407
BshTI	ACCGGT	1 cut(s)	880
BsiEI	CGRYCG	2 cut(s)	214, 495
BsiHKAI	GWGCWC	3 cut(s)	713, 1096, 1581
BsiSI	CCGG	4 cut(s)	430, 752, 881, 1174
BslFI	GGGAC	3 cut(s)	408, 1577, 1842
BslI	CCNNNNNNNGG	6 cut(s)	314, 564, 959, 1573, 1634, 1910
BsmAI	GTCTC	3 cut(s)	223, 1128, 1157
BsmFI	GGGAC	3 cut(s)	408, 1577, 1842
BsnI	GGCC	6 cut(s)	213, 433, 924, 1170, 1333, 1993
Bso31I	GGTCTC	1 cut(s)	1128
Bsp1286I	GDGCHC	4 cut(s)	330, 713, 1096, 1581
Bsp143I	GATC	8 cut(s)	187, 733, 844, 1080, 1503, 1816, 1900, 2106
BspACI	CCGC	5 cut(s)	117, 185, 244, 458, 1800
BspANI	GGCC	6 cut(s)	213, 433, 924, 1170, 1333, 1993
BspCNI	CTCAG	3 cut(s)	788, 841, 1377
BspHI	TCATGA	1 cut(s)	30
BspLI	GGNNCC	7 cut(s)	345, 355, 900, 1171, 1409, 1565, 1719
BspMAI	CTGCAG	2 cut(s)	697, 2068
BspMI	ACCTGC	3 cut(s)	700, 910, 2071
BspPI	GGATC	4 cut(s)	195, 839, 1088, 1895
BspT107I	GGYRCC	3 cut(s)	343, 898, 1407
BspTNI	GGTCTC	1 cut(s)	1128
BsrDI	GCAATG	1 cut(s)	163
BsrFI	RCCGGY	1 cut(s)	880
BsrI	ACTGG	4 cut(s)	270, 1171, 1449, 1914
BssAI	RCCGGY	1 cut(s)	880
BssECI	CCNNGG	8 cut(s)	135, 508, 958, 1172, 1327, 1334, 1399, 1785
BssMI	GATC	8 cut(s)	187, 733, 844, 1080, 1503, 1816, 1900, 2106
BssNI	GRCGYC	2 cut(s)	344, 531
BssSI	CACGAG	1 cut(s)	329
BssT1I	CCWWGG	4 cut(s)	1327, 1334, 1399, 1785
Bst2BI	CACGAG	1 cut(s)	329
Bst2UI	CCWGG	5 cut(s)	341, 960, 1001, 1098, 1995
Bst4CI	ACNGT	5 cut(s)	227, 317, 496, 614, 1289
BstACI	GRCGYC	2 cut(s)	344, 531
BstC8I	GCNNGC	2 cut(s)	931, 1798
BstDEI	CTNAG	7 cut(s)	123, 541, 650, 775, 849, 1364, 1373
BstENI	CCTNNNNNAGG	1 cut(s)	957
BstF5I	GGATG	2 cut(s)	1120, 1972
BstH2I	RGCGCY	1 cut(s)	347
BstHHI	GCGC	1 cut(s)	346
BstKTI	GATC	8 cut(s)	190, 736, 847, 1083, 1506, 1819, 1903, 2109
BstMAI	GTCTC	3 cut(s)	223, 1128, 1157
BstMBI	GATC	8 cut(s)	187, 733, 844, 1080, 1503, 1816, 1900, 2106
BstMCI	CGRYCG	2 cut(s)	214, 495
BstMWI	GCNNNNNNNGC	3 cut(s)	455, 930, 1939
BstNI	CCWGG	5 cut(s)	341, 960, 1001, 1098, 1995
BstNSI	RCATGY	1 cut(s)	1800
BstSCI	CCNGG	7 cut(s)	339, 751, 958, 999, 1096, 1172, 1993
BstSFI	CTRYAG	4 cut(s)	693, 972, 1032, 2064
BstSLI	GKGCMC	1 cut(s)	1581
BstV1I	GCAGC	5 cut(s)	707, 766, 1003, 1025, 1907
BstV2I	GAAGAC	1 cut(s)	40
BstZI	CGGCCG	1 cut(s)	211
BsuI	GTATCC	1 cut(s)	1007
BsuRI	GGCC	6 cut(s)	213, 433, 924, 1170, 1333, 1993
BtrI	CACGTC	2 cut(s)	46, 1832
BtsCI	GGATG	2 cut(s)	1120, 1972
BtsIMutI	CAGTG	2 cut(s)	619, 1456
BveI	ACCTGC	3 cut(s)	700, 910, 2071
Cac8I	GCNNGC	2 cut(s)	931, 1798
CaiI	CAGNNNCTG	1 cut(s)	2063
CciI	TCATGA	1 cut(s)	30
CfoI	GCGC	1 cut(s)	346
Cfr10I	RCCGGY	1 cut(s)	880
Cfr13I	GGNCC	5 cut(s)	354, 962, 1169, 1331, 1564
Csp6I	GTAC	9 cut(s)	132, 585, 591, 687, 878, 1004, 1029, 1986, 2036
CspAI	ACCGGT	1 cut(s)	880
CviAII	CATG	5 cut(s)	31, 103, 816, 1444, 1797
CviQI	GTAC	9 cut(s)	132, 585, 591, 687, 878, 1004, 1029, 1986, 2036
DdeI	CTNAG	7 cut(s)	123, 541, 650, 775, 849, 1364, 1373
DinI	GGCGCC	1 cut(s)	345
DpnI	GATC	8 cut(s)	189, 735, 846, 1082, 1505, 1818, 1902, 2108
DpnII	GATC	8 cut(s)	187, 733, 844, 1080, 1503, 1816, 1900, 2106
DriI	GACNNNNNGTC	1 cut(s)	401
EaeI	YGGCCR	3 cut(s)	211, 431, 922
EagI	CGGCCG	1 cut(s)	211
Eam1105I	GACNNNNNGTC	1 cut(s)	401
EclXI	CGGCCG	1 cut(s)	211
Eco130I	CCWWGG	4 cut(s)	1327, 1334, 1399, 1785
Eco24I	GRGCYC	1 cut(s)	330
Eco31I	GGTCTC	1 cut(s)	1128
Eco32I	GATATC	2 cut(s)	1588, 1762
Eco47I	GGWCC	3 cut(s)	354, 962, 1564
Eco52I	CGGCCG	1 cut(s)	211
Eco57I	CTGAAG	1 cut(s)	1750
EcoNI	CCTNNNNNAGG	1 cut(s)	957
EcoO109I	RGGNCCY	2 cut(s)	354, 962
EcoRI	GAATTC	1 cut(s)	1318
EcoRII	CCWGG	5 cut(s)	339, 958, 999, 1096, 1993
EcoRV	GATATC	2 cut(s)	1588, 1762
EcoT14I	CCWWGG	4 cut(s)	1327, 1334, 1399, 1785
EcoT38I	GRGCYC	1 cut(s)	330
EgeI	GGCGCC	1 cut(s)	345
EheI	GGCGCC	1 cut(s)	345
ErhI	CCWWGG	4 cut(s)	1327, 1334, 1399, 1785
FaeI	CATG	5 cut(s)	34, 106, 819, 1447, 1800
FalI	AAGNNNNNCTT	2 cut(s)	1410, 1442
FaqI	GGGAC	3 cut(s)	408, 1577, 1842
FatI	CATG	5 cut(s)	30, 102, 815, 1443, 1796
FauI	CCCGC	1 cut(s)	1793
FbaI	TGATCA	1 cut(s)	1816
Fnu4HI	GCNGC	6 cut(s)	245, 696, 780, 1014, 1017, 1896
FokI	GGATG	2 cut(s)	1107, 1959
FriOI	GRGCYC	1 cut(s)	330
Fsp4HI	GCNGC	6 cut(s)	245, 696, 780, 1014, 1017, 1896
FspBI	CTAG	8 cut(s)	374, 588, 669, 867, 966, 1596, 1704, 2088
GlaI	GCGC	1 cut(s)	345
GluI	GCNGC	6 cut(s)	245, 696, 780, 1014, 1017, 1896
GsaI	CCCAGC	1 cut(s)	562
GsuI	CTGGAG	2 cut(s)	291, 1704
HaeII	RGCGCY	1 cut(s)	347
HaeIII	GGCC	6 cut(s)	213, 433, 924, 1170, 1333, 1993
HapII	CCGG	4 cut(s)	430, 752, 881, 1174
HhaI	GCGC	1 cut(s)	346
Hin1I	GRCGYC	2 cut(s)	344, 531
Hin1II	CATG	5 cut(s)	34, 106, 819, 1447, 1800
Hin6I	GCGC	1 cut(s)	344
HinP1I	GCGC	1 cut(s)	344
HincII	GTYRAC	3 cut(s)	406, 535, 1663
HindII	GTYRAC	3 cut(s)	406, 535, 1663
HindIII	AAGCTT	1 cut(s)	1486
HpaII	CCGG	4 cut(s)	430, 752, 881, 1174
HphI	GGTGA	5 cut(s)	169, 268, 280, 895, 1265
HpyAV	CCTTC	6 cut(s)	62, 109, 244, 873, 963, 1152
HpyCH4III	ACNGT	5 cut(s)	227, 317, 496, 614, 1289
HpyCH4IV	ACGT	6 cut(s)	45, 531, 1257, 1831, 1884, 2034
HpyCH4V	TGCA	9 cut(s)	71, 106, 695, 782, 905, 1019, 1393, 1579, 2066
HpyF10VI	GCNNNNNNNGC	3 cut(s)	455, 930, 1939
HpyF3I	CTNAG	7 cut(s)	123, 541, 650, 775, 849, 1364, 1373
HpySE526I	ACGT	6 cut(s)	45, 531, 1257, 1831, 1884, 2034
Hsp92I	GRCGYC	2 cut(s)	344, 531
Hsp92II	CATG	5 cut(s)	34, 106, 819, 1447, 1800
HspAI	GCGC	1 cut(s)	344
KasI	GGCGCC	1 cut(s)	343
Ksp22I	TGATCA	1 cut(s)	1816
Kzo9I	GATC	8 cut(s)	187, 733, 844, 1080, 1503, 1816, 1900, 2106
LmnI	GCTCC	3 cut(s)	1346, 1723, 1939
Lsp1109I	GCAGC	5 cut(s)	707, 766, 1003, 1025, 1907
LweI	GCATC	5 cut(s)	133, 216, 914, 1387, 1541
MaeI	CTAG	8 cut(s)	374, 588, 669, 867, 966, 1596, 1704, 2088
MaeII	ACGT	6 cut(s)	45, 531, 1257, 1831, 1884, 2034
MaeIII	GTNAC	5 cut(s)	110, 1211, 1253, 1598, 1915
MalI	GATC	8 cut(s)	189, 735, 846, 1082, 1505, 1818, 1902, 2108
MboI	GATC	8 cut(s)	187, 733, 844, 1080, 1503, 1816, 1900, 2106
MboII	GAAGA	6 cut(s)	40, 85, 328, 1318, 1327, 1756
MfeI	CAATTG	1 cut(s)	1689
MhlI	GDGCHC	4 cut(s)	330, 713, 1096, 1581
MlsI	TGGCCA	1 cut(s)	924
MluNI	TGGCCA	1 cut(s)	924
Mly113I	GGCGCC	1 cut(s)	344
MlyI	GAGTC	3 cut(s)	225, 390, 895
MmeI	TCCRAC	2 cut(s)	1176, 1590
Mox20I	TGGCCA	1 cut(s)	924
MroXI	GAANNNNTTC	1 cut(s)	1425
MscI	TGGCCA	1 cut(s)	924
Msp20I	TGGCCA	1 cut(s)	924
MspA1I	CMGCKG	3 cut(s)	779, 1016, 1898
MspI	CCGG	4 cut(s)	430, 752, 881, 1174
MspR9I	CCNGG	7 cut(s)	341, 753, 960, 1001, 1098, 1174, 1995
MunI	CAATTG	1 cut(s)	1689
MvaI	CCWGG	5 cut(s)	341, 960, 1001, 1098, 1995
MwoI	GCNNNNNNNGC	3 cut(s)	455, 930, 1939
NarI	GGCGCC	1 cut(s)	344
NciI	CCSGG	2 cut(s)	753, 1174
NdeII	GATC	8 cut(s)	187, 733, 844, 1080, 1503, 1816, 1900, 2106
NlaIII	CATG	5 cut(s)	34, 106, 819, 1447, 1800
NlaIV	GGNNCC	7 cut(s)	345, 355, 900, 1171, 1409, 1565, 1719
NmeAIII	GCCGAG	2 cut(s)	239, 489
NmuCI	GTSAC	3 cut(s)	110, 1253, 1915
NspI	RCATGY	1 cut(s)	1800
PaeI	GCATGC	1 cut(s)	1800
PagI	TCATGA	1 cut(s)	30
PaqCI	CACCTGC	3 cut(s)	700, 910, 2071
PdmI	GAANNNNTTC	1 cut(s)	1425
PfeI	GAWTC	8 cut(s)	481, 545, 632, 1129, 1359, 1384, 1463, 1613
PflMI	CCANNNNNTGG	2 cut(s)	1573, 1634
PinAI	ACCGGT	1 cut(s)	880
PkrI	GCNGC	6 cut(s)	246, 697, 781, 1015, 1018, 1897
PleI	GAGTC	3 cut(s)	224, 390, 894
PluTI	GGCGCC	1 cut(s)	347
PpsI	GAGTC	3 cut(s)	224, 390, 894
PpuMI	RGGWCCY	2 cut(s)	354, 962
PshBI	ATTAAT	1 cut(s)	792
Psp5II	RGGWCCY	2 cut(s)	354, 962
Psp6I	CCWGG	5 cut(s)	339, 958, 999, 1096, 1993
PspFI	CCCAGC	1 cut(s)	558
PspGI	CCWGG	5 cut(s)	339, 958, 999, 1096, 1993
PspN4I	GGNNCC	7 cut(s)	345, 355, 900, 1171, 1409, 1565, 1719
PspPI	GGNCC	5 cut(s)	354, 962, 1169, 1331, 1564
PspPPI	RGGWCCY	2 cut(s)	354, 962
PstI	CTGCAG	2 cut(s)	697, 2068
PstNI	CAGNNNCTG	1 cut(s)	2063
PvuII	CAGCTG	3 cut(s)	779, 1016, 1898
RsaI	GTAC	9 cut(s)	133, 586, 592, 688, 879, 1005, 1030, 1987, 2037
RsaNI	GTAC	9 cut(s)	132, 585, 591, 687, 878, 1004, 1029, 1986, 2036
SatI	GCNGC	6 cut(s)	245, 696, 780, 1014, 1017, 1896
Sau3AI	GATC	8 cut(s)	187, 733, 844, 1080, 1503, 1816, 1900, 2106
Sau96I	GGNCC	5 cut(s)	354, 962, 1169, 1331, 1564
ScaI	AGTACT	2 cut(s)	592, 1030
SchI	GAGTC	3 cut(s)	225, 390, 895
ScrFI	CCNGG	7 cut(s)	341, 753, 960, 1001, 1098, 1174, 1995
SduI	GDGCHC	4 cut(s)	330, 713, 1096, 1581
SfaNI	GCATC	5 cut(s)	133, 216, 914, 1387, 1541
SfcI	CTRYAG	4 cut(s)	693, 972, 1032, 2064
SfoI	GGCGCC	1 cut(s)	345
SinI	GGWCC	3 cut(s)	354, 962, 1564
SmlI	CTYRAG	2 cut(s)	680, 1521
SmoI	CTYRAG	2 cut(s)	680, 1521
SpeI	ACTAGT	3 cut(s)	587, 668, 2087
SphI	GCATGC	1 cut(s)	1800
SsiI	CCGC	5 cut(s)	117, 185, 244, 458, 1800
SspDI	GGCGCC	1 cut(s)	343
SspI	AATATT	1 cut(s)	2053
SspMI	CTAG	8 cut(s)	374, 588, 669, 867, 966, 1596, 1704, 2088
StyD4I	CCNGG	7 cut(s)	339, 751, 958, 999, 1096, 1172, 1993
StyI	CCWWGG	4 cut(s)	1327, 1334, 1399, 1785
TaaI	ACNGT	5 cut(s)	227, 317, 496, 614, 1289
TaiI	ACGT	6 cut(s)	48, 534, 1260, 1834, 1887, 2037
TaqI	TCGA	7 cut(s)	363, 983, 1132, 1283, 1654, 1679, 2109
TatI	WGTACW	3 cut(s)	590, 1028, 1985
TauI	GCSGC	1 cut(s)	247
TfiI	GAWTC	8 cut(s)	481, 545, 632, 1129, 1359, 1384, 1463, 1613
TscAI	CASTG	2 cut(s)	619, 1456
TseFI	GTSAC	3 cut(s)	110, 1253, 1915
TseI	GCWGC	5 cut(s)	695, 779, 1013, 1016, 1895
Tsp45I	GTSAC	3 cut(s)	110, 1253, 1915
TspDTI	ATGAA	9 cut(s)	14, 91, 716, 1051, 1060, 1131, 1239, 1432, 2112
TspGWI	ACGGA	1 cut(s)	1772
TspRI	CASTG	2 cut(s)	619, 1456
Van91I	CCANNNNNTGG	2 cut(s)	1573, 1634
VneI	GTGCAC	1 cut(s)	1577
VpaK11BI	GGWCC	3 cut(s)	354, 962, 1564
VspI	ATTAAT	1 cut(s)	792
XagI	CCTNNNNNAGG	1 cut(s)	957
XapI	RAATTY	6 cut(s)	250, 283, 820, 948, 1318, 1838
XceI	RCATGY	1 cut(s)	1800
XcmI	CCANNNNNNNNNTGG	1 cut(s)	262
XmnI	GAANNNNTTC	1 cut(s)	1425
XspI	CTAG	8 cut(s)	374, 588, 669, 867, 966, 1596, 1704, 2088
ZraI	GACGTC	1 cut(s)	532
ZrmI	AGTACT	2 cut(s)	592, 1030

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.