Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000432.1

Orthogroup ID

OG0014368

Physical Location & Seq

Genomic Coordinates Reverse (-)

46461 .. 51069

Gene Structure 4609 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2985 bp

atgagacacccatggcagcgtctgcttcttctccgagctcacctccgttcctcgcctcacgtgttctcacagtcttcttactctcaggtaaactcccaatcgaatctccattcattttcgctcttccacactgacactctccacccaaagcttccaactttacagtccattttcaaatacccactaaaccctagaaaccccatttcacgaaacctctcgtcggagccagcacttgaaactaaagactccgatcatggggttatagctgaaattttctctaggcctagggatgaaattgatattaggaaagacttggaattgaacaatgtagagtttacccatgattttgttttgagtgttttgaagagcttagaatcgagccctgatgttgcgaggagggttttcgattgggttttgttatctgaaggtaagagattgagctcgaaatcgtataatcagatgctgtgtattttgggtgtcaatggggttgtgaaggagttctgggagttggtttacgttatgaagaagaaagggtatggcgtgtcgaaatgggttcatgatagggttttagagaaatttgaggaggatgggttggagaatgatgctgaggaattgagaggggtgtttgcatcagggtctactgacagttcagtggcgaaggtttgttccacggtgtgtaagattgttagaaatgaggtgtggagtgatgatattgagaggcaaatacgggagttgaatgttgcattttctagtgatgtggttaaaatggtggtggagcatcttaaaacagagccaacaaaagcactgatcttctttcggtgggtggaggaggctgggttgttgaagcacgatcaacagacgtataatgcagtggcaagggtattgggaaggatagactgtagggataggttttggaaagtagttgatgacatgagcagcaatgggtgtgaactggagttgaacacgtatgataaggttttagaaaggttttgtaagaggggggaactgaaggatgctgtggacttgtatgagtttgcaatggctggtaaaaaaaagcctccggtggcttgttgtactttccagctgaagaaaatagtggttggtaaggagctggacatgggtttattttcgagggttgtgaggatctatacagagagtgggaatgccttgacaaattcaatgctcaatgcagtcctcaagtctttgatcagtgttggtagacttggagagtgcaataaggttttcaaagtaatggagggaggtgggcttgtagctagtgctggtttacagggtataattgcattcaggcttggtagtgctggtaaagaggatgaggcaagtgacttcattaatattatgcaagcgtctggtactgatctgaattacaaggcatggtcgtccttgattgagggatattgtgtagctggtgatcttgagaaggcctcagattgtttccaaatgatgattgaaagggagggggttgcctctgcaggttctgcttttgaattggtagtcaatgcatattgcagaaagaacagggcaactgatgcatacaagtttctctctgatttggtcagtaaaaggcagctcaagccatggcagaccacatacaaactgttgattagcaagttattggctcagggtgaatttagaaacgctctgcatattctgggtctgatgaaaaatgatcgatttcctccttttatagatccattcattaagcatgtatcaaagtctggaactggtgatgacgctatagcttttctgaagatcatggcttcaaaggaatttccatccaccattgtgtttctcaaagtatttgaagcctattttaaggctggacggcgtagcgaagcacaagatttcctttcaaaatgcccgggctacattcgtaatcatgctgatgtactgaacctattctgtcctggtaaatctggagaagctcggctcggggctcgacggaggggtggggcttgcctgacggaggccaggggtcggactgaccggtctgcagttggtggagtctccggcgatgtagttgcagtgttgcccagaaacctgcaacctcgacctcctccgacctcaatagctgcccagaagttgtttgggatgcctccggcctccgcggcgacggtggctccgggcttggaggacagaggctggaggcttagcggacggttttgggcagcattcgaggtcggagttgcaggtttctgggcagcgacctcacctgcaactgcaggtttctgggctgagttgcaaccacgtcgccggcgactctaccgactgcagaccagtccgtcctacccctggcgtccgtccggcaagccccgcagctctgtcgctccccgagccgagctgcagcatcgatgtccgcactttaaatacagtgcggacgtcctcgacgtcctctttggaacccttatatatatatcaggcccgttccaaagaggacgtccgcactttgctaaagtgcgaacggcgatgcagcagcggcgttccaggcggcgacggtggctccgggcttggaggacagaggctggaggcttagcggacggttttgggcagcattcgaggtcggagttgcaggtttctgggcagcgacctcacctgcaactgcaggtttctgggctgagttgcaaccacgtcgccggcgactctaccgactgcagaccagtccgtcctacccctggcgtccgtccggcaagccccgcagctctgtcgctccccgagccgagctgcagcatcgatgtccgcactttaaatacagtgcggacgtcctctttggaaccgctccgtcggagttgcaggtttctgggcagcgacctcacctgcaactgcaggtttctgggcagagttgcaaccacgtcgccggcgactctaccgactgcagaccagtccgtcctacccctggcgtccgtccggcaagccccgcagctctgtggctccccgagccgagctgcagcatcgacgtccgcactttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR

Protein Analysis

994

Amino Acids

110.53

Weight (kDa)

9.46

Isoelectric Point (pI)

48.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR	PF01535	464 - 491	3.9e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014368)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02490 AT5G15980
fragaria_vesca	FvH4_6g45820
malus_domestica	MD09G1079500.v1.1 MD17G1069900.v1.1
prunus_persica	Prupe.3G244800_v2.0.a1
pyrus_communis	pycom09g00630 pycom17g07000
rosa_chinensis	RchiOBHm_Chr2g0164021
rosa_laevigata	RLG00000021433
rosa_multiflora	Rmu_ssc0000432.1_g000010
rosa_rugosa	Rorug02G0506300
rosa_samantha	Rh2AG574400 Rh2BG585000 Rh2CG555900 Rh2DG594600
rosa_wichuraiana	Rw2G047510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	3 cut(s)	2239, 2619, 2840
AasI	GACNNNNNNGTC	4 cut(s)	2005, 2299, 2679, 2900
AatII	GACGTC	5 cut(s)	2400, 2409, 2458, 2780, 2975
AccBSI	CCGCTC	1 cut(s)	2794
AccI	GTMKAC	2 cut(s)	638, 1219
AccII	CGCG	1 cut(s)	2126
AclWI	GGATC	2 cut(s)	1151, 1703
AcsI	RAATTY	5 cut(s)	270, 575, 1174, 1646, 1787
AcuI	CTGAAG	4 cut(s)	444, 1028, 1106, 1787
AcvI	CACGTG	1 cut(s)	61
AcyI	GRCGYC	8 cut(s)	2314, 2397, 2406, 2455, 2694, 2777, 2915, 2972
AdeI	CACNNNGTG	1 cut(s)	675
AfaI	GTAC	3 cut(s)	1075, 1372, 1908
AfiI	CCNNNNNNNGG	7 cut(s)	220, 255, 1984, 1995, 2310, 2690, 2911
AflIII	ACRYGT	2 cut(s)	60, 963
AgeI	ACCGGT	1 cut(s)	2004
AjiI	CACGTC	3 cut(s)	2267, 2647, 2868
AjnI	CCWGG	6 cut(s)	1924, 1988, 2309, 2501, 2689, 2910
AleI	CACNNNNGTG	1 cut(s)	1802
Alw21I	GWGCWC	2 cut(s)	40, 443
Alw26I	GTCTC	1 cut(s)	2029
AlwI	GGATC	2 cut(s)	1151, 1703
AlwNI	CAGNNNCTG	5 cut(s)	22, 463, 1496, 2160, 2540
Ama87I	CYCGRG	5 cut(s)	1879, 1949, 2349, 2729, 2950
AoxI	GGCC	5 cut(s)	281, 1440, 1986, 2118, 2437
ApoI	RAATTY	5 cut(s)	270, 575, 1174, 1646, 1787
ArsI	GACNNNNNNTTYG	6 cut(s)	2396, 2428, 2440, 2472, 2767, 2799
AseI	ATTAAT	1 cut(s)	1350
AsiGI	ACCGGT	1 cut(s)	2004
Asp700I	GAANNNNTTC	2 cut(s)	497, 1916
AspA2I	CCTAGG	1 cut(s)	284
AspS9I	GGNCC	1 cut(s)	2438
AsuC2I	CCSGG	4 cut(s)	1880, 1881, 2142, 2522
AsuHPI	GGTGA	7 cut(s)	32, 1439, 1655, 1757, 2220, 2600, 2821
AvaI	CYCGRG	5 cut(s)	1879, 1949, 2349, 2729, 2950
AvrII	CCTAGG	1 cut(s)	284
BanII	GRGCYC	4 cut(s)	40, 383, 443, 1957
BbrPI	CACGTG	1 cut(s)	61
BbsI	GAAGAC	1 cut(s)	66
Bbv12I	GWGCWC	2 cut(s)	40, 443
BbvCI	CCTCAGC	1 cut(s)	606
BccI	CCATC	2 cut(s)	581, 1801
BceAI	ACGGC	2 cut(s)	1859, 2496
BciT130I	CCWGG	6 cut(s)	1926, 1990, 2311, 2503, 2691, 2912
BclI	TGATCA	1 cut(s)	1206
BcnI	CCSGG	4 cut(s)	1880, 1881, 2142, 2522
BcoDI	GTCTC	1 cut(s)	2029
BfaI	CTAG	5 cut(s)	192, 279, 285, 750, 1275
BglI	GCCNNNNNGGC	1 cut(s)	2126
BlnI	CCTAGG	1 cut(s)	284
BlpI	GCTNAGC	2 cut(s)	2168, 2548
BmeT110I	CYCGRG	5 cut(s)	1879, 1949, 2349, 2729, 2950
BmgBI	CACGTC	3 cut(s)	2267, 2647, 2868
BmgT120I	GGNCC	1 cut(s)	2438
BmiI	GGNNCC	6 cut(s)	225, 2139, 2419, 2519, 2790, 2947
BpiI	GAAGAC	1 cut(s)	66
BplI	GAGNNNNNCTC	4 cut(s)	27, 59, 1427, 1459
BpmI	CTGGAG	4 cut(s)	974, 1956, 2182, 2562
Bpu10I	CCTNAGC	2 cut(s)	606, 1638
Bpu1102I	GCTNAGC	2 cut(s)	2168, 2548
BpuEI	CTTGAG	3 cut(s)	1181, 1454, 1574
BpuMI	CCSGG	4 cut(s)	1880, 1881, 2142, 2522
Bsa29I	ATCGAT	3 cut(s)	1690, 2368, 2748
BsaAI	YACGTR	2 cut(s)	61, 966
BsaHI	GRCGYC	8 cut(s)	2314, 2397, 2406, 2455, 2694, 2777, 2915, 2972
BsaWI	WCCGGW	2 cut(s)	1060, 2004
BsaXI	ACNNNNNCTCC	8 cut(s)	575, 605, 821, 851, 2122, 2152, 2502, 2532
Bsc4I	CCNNNNNNNGG	7 cut(s)	220, 255, 1984, 1995, 2310, 2690, 2911
Bse118I	RCCGGY	4 cut(s)	2004, 2271, 2651, 2872
Bse1I	ACTGG	5 cut(s)	957, 1747, 2295, 2675, 2896
Bse3DI	GCAATG	2 cut(s)	946, 1044
BseBI	CCWGG	6 cut(s)	1926, 1990, 2311, 2503, 2691, 2912
BseCI	ATCGAT	3 cut(s)	1690, 2368, 2748
BseGI	GGATG	6 cut(s)	295, 592, 1018, 1336, 1793, 2115
BseLI	CCNNNNNNNGG	7 cut(s)	220, 255, 1984, 1995, 2310, 2690, 2911
BseMI	GCAATG	2 cut(s)	946, 1044
BseMII	CTCAG	6 cut(s)	98, 597, 1458, 1652, 2244, 2624
BseNI	ACTGG	5 cut(s)	957, 1747, 2295, 2675, 2896
BseRI	GAGGAG	4 cut(s)	409, 596, 842, 2064
BseYI	CCCAGC	1 cut(s)	833
Bsh1236I	CGCG	1 cut(s)	2126
BshFI	GGCC	5 cut(s)	283, 1442, 1988, 2120, 2439
BshTI	ACCGGT	1 cut(s)	2004
BshVI	ATCGAT	3 cut(s)	1690, 2368, 2748
BsiHKAI	GWGCWC	2 cut(s)	40, 443
BsiHKCI	CYCGRG	5 cut(s)	1879, 1949, 2349, 2729, 2950
BslI	CCNNNNNNNGG	7 cut(s)	220, 255, 1984, 1995, 2310, 2690, 2911
BsmAI	GTCTC	1 cut(s)	2029
BsmI	GAATGC	4 cut(s)	1168, 1301, 2189, 2569
BsnI	GGCC	5 cut(s)	283, 1442, 1988, 2120, 2439
BsoBI	CYCGRG	5 cut(s)	1879, 1949, 2349, 2729, 2950
Bsp1286I	GDGCHC	4 cut(s)	40, 383, 443, 1957
Bsp1720I	GCTNAGC	2 cut(s)	2168, 2548
Bsp19I	CCATGG	2 cut(s)	11, 1595
BspANI	GGCC	5 cut(s)	283, 1442, 1988, 2120, 2439
BspCNI	CTCAG	6 cut(s)	97, 598, 1457, 1651, 2245, 2625
BspDI	ATCGAT	3 cut(s)	1690, 2368, 2748
BspFNI	CGCG	1 cut(s)	2126
BspHI	TCATGA	1 cut(s)	556
BspLI	GGNNCC	6 cut(s)	225, 2139, 2419, 2519, 2790, 2947
BspPI	GGATC	2 cut(s)	1151, 1703
BspQI	GCTCTTC	2 cut(s)	128, 359
BsrBI	CCGCTC	1 cut(s)	2794
BsrDI	GCAATG	2 cut(s)	946, 1044
BsrFI	RCCGGY	4 cut(s)	2004, 2271, 2651, 2872
BsrI	ACTGG	5 cut(s)	957, 1747, 2295, 2675, 2896
BssAI	RCCGGY	4 cut(s)	2004, 2271, 2651, 2872
BssNI	GRCGYC	8 cut(s)	2314, 2397, 2406, 2455, 2694, 2777, 2915, 2972
BssT1I	CCWWGG	3 cut(s)	11, 284, 1595
Bst2UI	CCWGG	6 cut(s)	1926, 1990, 2311, 2503, 2691, 2912
Bst6I	CTCTTC	2 cut(s)	128, 359
BstACI	GRCGYC	8 cut(s)	2314, 2397, 2406, 2455, 2694, 2777, 2915, 2972
BstAPI	GCANNNNNTGC	3 cut(s)	22, 1496, 1547
BstBAI	YACGTR	2 cut(s)	61, 966
BstC8I	GCNNGC	9 cut(s)	228, 1362, 1975, 2273, 2327, 2653, 2707, 2874, 2928
BstDEI	CTNAG	9 cut(s)	84, 370, 606, 1444, 1638, 2168, 2253, 2548, 2633
BstDSI	CCRYGG	4 cut(s)	11, 669, 1595, 2124
BstENI	CCTNNNNNAGG	1 cut(s)	1982
BstF5I	GGATG	6 cut(s)	295, 592, 1018, 1336, 1793, 2115
BstFNI	CGCG	1 cut(s)	2126
BstMAI	GTCTC	1 cut(s)	2029
BstNI	CCWGG	6 cut(s)	1926, 1990, 2311, 2503, 2691, 2912
BstNSI	RCATGY	1 cut(s)	1727
BstUI	CGCG	1 cut(s)	2126
BstV2I	GAAGAC	1 cut(s)	66
BstX2I	RGATCY	2 cut(s)	1143, 1708
BstYI	RGATCY	2 cut(s)	1143, 1708
Bsu15I	ATCGAT	3 cut(s)	1690, 2368, 2748
BsuRI	GGCC	5 cut(s)	283, 1442, 1988, 2120, 2439
BsuTUI	ATCGAT	3 cut(s)	1690, 2368, 2748
BtgI	CCRYGG	4 cut(s)	11, 669, 1595, 2124
BtgZI	GCGATG	2 cut(s)	2046, 2498
BtrI	CACGTC	3 cut(s)	2267, 2647, 2868
BtsCI	GGATG	6 cut(s)	295, 592, 1018, 1336, 1793, 2115
BtsI	GCAGTG	2 cut(s)	876, 2049
BtsIMutI	CAGTG	8 cut(s)	129, 657, 803, 876, 1216, 2049, 2395, 2775
Cac8I	GCNNGC	9 cut(s)	228, 1362, 1975, 2273, 2327, 2653, 2707, 2874, 2928
CaiI	CAGNNNCTG	5 cut(s)	22, 463, 1496, 2160, 2540
CciI	TCATGA	1 cut(s)	556
Cfr10I	RCCGGY	4 cut(s)	2004, 2271, 2651, 2872
Cfr13I	GGNCC	1 cut(s)	2438
Cfr42I	CCGCGG	1 cut(s)	2127
Cfr9I	CCCGGG	1 cut(s)	1879
ClaI	ATCGAT	3 cut(s)	1690, 2368, 2748
CseI	GACGC	6 cut(s)	8, 1353, 1760, 2303, 2683, 2904
Csp6I	GTAC	3 cut(s)	1074, 1371, 1907
CspAI	ACCGGT	1 cut(s)	2004
CviQI	GTAC	3 cut(s)	1074, 1371, 1907
DdeI	CTNAG	9 cut(s)	84, 370, 606, 1444, 1638, 2168, 2253, 2548, 2633
DraI	TTTAAA	2 cut(s)	2383, 2763
DraIII	CACNNNGTG	1 cut(s)	675
DrdI	GACNNNNNNGTC	4 cut(s)	2005, 2299, 2679, 2900
DseDI	GACNNNNNNGTC	4 cut(s)	2005, 2299, 2679, 2900
Eam1104I	CTCTTC	2 cut(s)	128, 359
EarI	CTCTTC	2 cut(s)	128, 359
Ecl136II	GAGCTC	2 cut(s)	38, 441
Eco130I	CCWWGG	3 cut(s)	11, 284, 1595
Eco147I	AGGCCT	2 cut(s)	283, 1442
Eco24I	GRGCYC	4 cut(s)	40, 383, 443, 1957
Eco53kI	GAGCTC	2 cut(s)	38, 441
Eco57I	CTGAAG	4 cut(s)	444, 1028, 1106, 1787
Eco72I	CACGTG	1 cut(s)	61
Eco88I	CYCGRG	5 cut(s)	1879, 1949, 2349, 2729, 2950
EcoICRI	GAGCTC	2 cut(s)	38, 441
EcoNI	CCTNNNNNAGG	1 cut(s)	1982
EcoRII	CCWGG	6 cut(s)	1924, 1988, 2309, 2501, 2689, 2910
EcoT14I	CCWWGG	3 cut(s)	11, 284, 1595
EcoT22I	ATGCAT	2 cut(s)	1522, 1552
EcoT38I	GRGCYC	4 cut(s)	40, 383, 443, 1957
ErhI	CCWWGG	3 cut(s)	11, 284, 1595
FalI	AAGNNNNNCTT	2 cut(s)	1851, 1883
FauI	CCCGC	3 cut(s)	2339, 2719, 2940
FbaI	TGATCA	1 cut(s)	1206
FblI	GTMKAC	2 cut(s)	638, 1219
FokI	GGATG	6 cut(s)	302, 599, 1025, 1343, 1780, 2122
FriOI	GRGCYC	4 cut(s)	40, 383, 443, 1957
FspBI	CTAG	5 cut(s)	192, 279, 285, 750, 1275
GsaI	CCCAGC	1 cut(s)	837
GsuI	CTGGAG	4 cut(s)	974, 1956, 2182, 2562
HaeIII	GGCC	5 cut(s)	283, 1442, 1988, 2120, 2439
HgaI	GACGC	6 cut(s)	8, 1353, 1760, 2303, 2683, 2904
Hin1I	GRCGYC	8 cut(s)	2314, 2397, 2406, 2455, 2694, 2777, 2915, 2972
HindIII	AAGCTT	1 cut(s)	149
HinfI	GANTC	7 cut(s)	103, 245, 374, 2022, 2277, 2657, 2878
HphI	GGTGA	7 cut(s)	32, 1439, 1655, 1757, 2220, 2600, 2821
Hpy166II	GTNNAC	8 cut(s)	91, 336, 514, 639, 950, 1021, 1220, 1286
Hpy188III	TCNNGA	5 cut(s)	207, 557, 1433, 1737, 1935
Hpy8I	GTNNAC	8 cut(s)	91, 336, 514, 639, 950, 1021, 1220, 1286
HpyAV	CCTTC	6 cut(s)	419, 487, 652, 882, 1003, 1432
HpyF3I	CTNAG	9 cut(s)	84, 370, 606, 1444, 1638, 2168, 2253, 2548, 2633
Hsp92I	GRCGYC	8 cut(s)	2314, 2397, 2406, 2455, 2694, 2777, 2915, 2972
KroI	GCCGGC	3 cut(s)	2271, 2651, 2872
KroNI	GCCGGC	3 cut(s)	2273, 2653, 2874
Ksp22I	TGATCA	1 cut(s)	1206
KspI	CCGCGG	1 cut(s)	2127
LguI	GCTCTTC	2 cut(s)	128, 359
LmnI	GCTCC	9 cut(s)	223, 775, 1108, 2143, 2350, 2523, 2730, 2799, 2951
MaeI	CTAG	5 cut(s)	192, 279, 285, 750, 1275
MaeIII	GTNAC	1 cut(s)	1340
MbiI	CCGCTC	1 cut(s)	2794
MboII	GAAGA	9 cut(s)	20, 66, 115, 376, 535, 538, 802, 1099, 1780
MflI	RGATCY	2 cut(s)	1143, 1708
MhlI	GDGCHC	4 cut(s)	40, 383, 443, 1957
MlyI	GAGTC	5 cut(s)	239, 2031, 2271, 2651, 2872
MmeI	TCCRAC	8 cut(s)	179, 201, 573, 1976, 2102, 2179, 2559, 2780
Mph1103I	ATGCAT	2 cut(s)	1522, 1552
MreI	CGCCGGCG	3 cut(s)	2271, 2651, 2872
MroNI	GCCGGC	3 cut(s)	2271, 2651, 2872
MroXI	GAANNNNTTC	2 cut(s)	497, 1916
MseI	TTAA	8 cut(s)	762, 783, 1350, 1719, 1833, 2382, 2762, 2983
MslI	CAYNNNNRTG	2 cut(s)	1802, 1902
MspA1I	CMGCKG	3 cut(s)	1084, 2126, 2494
Mva1269I	GAATGC	4 cut(s)	1168, 1301, 2189, 2569
MvaI	CCWGG	6 cut(s)	1926, 1990, 2311, 2503, 2691, 2912
MvnI	CGCG	1 cut(s)	2126
NaeI	GCCGGC	3 cut(s)	2273, 2653, 2874
NciI	CCSGG	4 cut(s)	1880, 1881, 2142, 2522
NcoI	CCATGG	2 cut(s)	11, 1595
NgoMIV	GCCGGC	3 cut(s)	2271, 2651, 2872
NlaIV	GGNNCC	6 cut(s)	225, 2139, 2419, 2519, 2790, 2947
NmeAIII	GCCGAG	4 cut(s)	1924, 2380, 2760, 2981
NmuCI	GTSAC	1 cut(s)	1340
NsiI	ATGCAT	2 cut(s)	1522, 1552
NspI	RCATGY	1 cut(s)	1727
OliI	CACNNNNGTG	1 cut(s)	1802
PagI	TCATGA	1 cut(s)	556
PaqCI	CACCTGC	3 cut(s)	2239, 2619, 2840
PceI	AGGCCT	2 cut(s)	283, 1442
PciSI	GCTCTTC	2 cut(s)	128, 359
PcsI	WCGNNNNNNNCGW	4 cut(s)	2272, 2403, 2652, 2873
PctI	GAATGC	4 cut(s)	1168, 1301, 2189, 2569
PdiI	GCCGGC	3 cut(s)	2273, 2653, 2874
PdmI	GAANNNNTTC	2 cut(s)	497, 1916
PfeI	GAWTC	2 cut(s)	103, 374
PinAI	ACCGGT	1 cut(s)	2004
PleI	GAGTC	5 cut(s)	239, 2030, 2271, 2651, 2872
PmaCI	CACGTG	1 cut(s)	61
PmlI	CACGTG	1 cut(s)	61
PpsI	GAGTC	5 cut(s)	239, 2030, 2271, 2651, 2872
Ppu21I	YACGTR	2 cut(s)	61, 966
PshBI	ATTAAT	1 cut(s)	1350
Psp124BI	GAGCTC	2 cut(s)	40, 443
Psp6I	CCWGG	6 cut(s)	1924, 1988, 2309, 2501, 2689, 2910
PspCI	CACGTG	1 cut(s)	61
PspFI	CCCAGC	1 cut(s)	833
PspGI	CCWGG	6 cut(s)	1924, 1988, 2309, 2501, 2689, 2910
PspN4I	GGNNCC	6 cut(s)	225, 2139, 2419, 2519, 2790, 2947
PspPI	GGNCC	1 cut(s)	2438
PstNI	CAGNNNCTG	5 cut(s)	22, 463, 1496, 2160, 2540
PsuI	RGATCY	2 cut(s)	1143, 1708
PvuII	CAGCTG	1 cut(s)	1084
RsaI	GTAC	3 cut(s)	1075, 1372, 1908
RsaNI	GTAC	3 cut(s)	1074, 1371, 1907
RseI	CAYNNNNRTG	2 cut(s)	1802, 1902
SacI	GAGCTC	2 cut(s)	40, 443
SacII	CCGCGG	1 cut(s)	2127
SapI	GCTCTTC	2 cut(s)	128, 359
SaqAI	TTAA	8 cut(s)	762, 783, 1350, 1719, 1833, 2382, 2762, 2983
Sau96I	GGNCC	1 cut(s)	2438
SchI	GAGTC	5 cut(s)	239, 2031, 2271, 2651, 2872
SduI	GDGCHC	4 cut(s)	40, 383, 443, 1957
Sfr303I	CCGCGG	1 cut(s)	2127
SgrAI	CRCCGGYG	3 cut(s)	2271, 2651, 2872
SgrBI	CCGCGG	1 cut(s)	2127
SmaI	CCCGGG	1 cut(s)	1881
SmiMI	CAYNNNNRTG	2 cut(s)	1802, 1902
SmlI	CTYRAG	3 cut(s)	1196, 1433, 1589
SmoI	CTYRAG	3 cut(s)	1196, 1433, 1589
SrfI	GCCCGGGC	1 cut(s)	1881
SseBI	AGGCCT	2 cut(s)	283, 1442
SspI	AATATT	1 cut(s)	1354
SspMI	CTAG	5 cut(s)	192, 279, 285, 750, 1275
SstI	GAGCTC	2 cut(s)	40, 443
StuI	AGGCCT	2 cut(s)	283, 1442
StyI	CCWWGG	3 cut(s)	11, 284, 1595
TatI	WGTACW	2 cut(s)	1073, 1906
TauI	GCSGC	3 cut(s)	2129, 2497, 2509
TfiI	GAWTC	2 cut(s)	103, 374
Tru1I	TTAA	8 cut(s)	762, 783, 1350, 1719, 1833, 2382, 2762, 2983
Tru9I	TTAA	8 cut(s)	762, 783, 1350, 1719, 1833, 2382, 2762, 2983
TscAI	CASTG	8 cut(s)	136, 657, 810, 876, 1216, 2049, 2395, 2775
TseFI	GTSAC	1 cut(s)	1340
Tsp45I	GTSAC	1 cut(s)	1340
TspDTI	ATGAA	7 cut(s)	102, 306, 536, 545, 1336, 1694, 1705
TspMI	CCCGGG	1 cut(s)	1879
TspRI	CASTG	8 cut(s)	136, 657, 810, 876, 1216, 2049, 2395, 2775
VspI	ATTAAT	1 cut(s)	1350
XagI	CCTNNNNNAGG	1 cut(s)	1982
XapI	RAATTY	5 cut(s)	270, 575, 1174, 1646, 1787
XceI	RCATGY	1 cut(s)	1727
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2102
XmaI	CCCGGG	1 cut(s)	1879
XmaJI	CCTAGG	1 cut(s)	284
XmiI	GTMKAC	2 cut(s)	638, 1219
XmnI	GAANNNNTTC	2 cut(s)	497, 1916
XspI	CTAG	5 cut(s)	192, 279, 285, 750, 1275
ZraI	GACGTC	5 cut(s)	2398, 2407, 2456, 2778, 2973
Zsp2I	ATGCAT	2 cut(s)	1522, 1552

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.