Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000174

Orthogroup ID

OG0009128

Physical Location & Seq

Genomic Coordinates Reverse (-)

113959 .. 120007

Gene Structure 6049 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_174G00435160.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1917 bp

ATGGCTACCCAGAAACACTCGCCTGCTATAAAGGGCGCCAAAGTTCTCATGGTTGGAGCAGGAGGTATCGGCTGCGAGCTACTCAAGACTCTCGCTCTTTCTGGCTTCCAAGACATTCATATTATTGACATGGACACTATAGAAGTCAGTAACCTCAACAGGCAATTCCTCTTTCGACAATCGCATGTTGGGCAATCCAAGGCCAAAGTTGCTCGGGATGCTGTCTTAAAATTTAGGCCTCACATAAGCATTACTCCATACCATGCAAATGTTAAGGACCCTGACTTCAACGTGGATTTCTTTAAACAGTTTAACGTTGTTTTGAATGGACTTGACAACTTGGATGCCAGGCGACATGTGAATCGCCTATGCCTGGCAGCTGATGTTCCTTTAATCGAAAGTGGGACTACTGGGTTCCTTGGACAGGTGACTGTACATGTGAAGGGAACAACAGAGTGCTATGAATGCCAGCCTAAACCTGCTCCCAAAACGTACCCTGTCTGCACCATAACGAGCACTCCATCAAAGTTTGTTCACTGCATTGTATGGGCGAAGGAACTGCTCTTTGCAAAGTTGTTTGGGGACAAGAGTCAGGCCAATGATTTGAATGTGCGTTCCAGTGATGGTGCTAGCTCATCAGAACAGGCAGAAGATGTTTTTGAGCATAGGAAAGACGAAGACATTGAGCAGTATGGAAGAAGAATATATGATCATGTATTTGGTTATAACATTGAGGTAGCTTTGTCTAATGAGGAGACATGGAAGAACCGTCATAGACCAAAGCCCATATATAGTAGGGATGCCATGCCTAATGATGTCAGTCAACAGAATGGAAATGTGGAAAAAAGTGGTGCAACCAGTGATCCATCTTCAGTATCTGCCATGGTATCTCTAGGACTGAAAAATCCCCAAGATGTGTGGAGCCTTATGGAAAATTCTAGGGTCTTTCTTGAGGCTTTGAAACTATTTTTCATGAAAAGGGGAAAGGAGATTGGAAACATGATTTTTGATAAAGATGATCAGCTAGCTGTAGAATTTGTTACTGCTGCCGCAAACATAAGGGCCACTGCTTTTGGCATCCCATTGCATAGTCTATTTGAAGCTAAAGGTATTGCTGGTAATATTGTCCATGCTGTTGCAACAACAAATGCAATTATTGCTGGGTTGATTGTCATTGAGACAGTCAAGGTGCTGCAAAATGACGCAAAAAATTACAGGATGACTTATTGTCTGGAACATCCAACAAGAAAGATGCTACTCATGCCAGTGGAACCATTTGAACCTAACAAGTCCTGCTATGTCTGTTCGGAGACACCACTATTATTAGAGATCAACACCAACCGTGCAAAATTGCGGGACATAGCTGAAAAGATAGTTAAAAACAAGCTTGGAATGAACTCTCCACTCATTATGCACGGAGCAGCACTTCTTTATGAAGTTGGTGATGACCTGGATGAAGCCATGATAAAAAATTATGCAGCGAATCTTGATAAGGTGCTATCTGAGTTTCCTTCTCCAGTTACTAGTGGAACCATGCTGACAATTGAGGATCTTCAGCAAGAACTGAAATGCAATATCAATATCAAACACAGAGAGGAATTTGATGAGGAGAAGGAACCTGATGGAATGGTTCTATCTGGATGGACAGAACCTGTGGTTAAGGATGACAAGAAGTCCAGTGCTAATGTTGGAAGCACATCAAGTGCATCAGAACTGGAGACTGATAAGAATAATGAGATTGAAACTGCTCCTGGAAAGAAAAGAAAACTGTCCGATGTTTCTGAGGCAGATACTTCAAGTGTTGCTGGTGATACAAAAACTCATGGGAAATTGGAAGTTCTTGACGACGACGATGATGACGTTGTCATGTTTAATGATTGGGATTCTGCCACCAACAAGAAGTTAAGGTCGCAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005911 GO:0006464 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008641 GO:0009506 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016874 GO:0016877 GO:0016925 GO:0018193 GO:0018205 GO:0019538 GO:0019948 GO:0022414 GO:0030054 GO:0032446 GO:0032501 GO:0032502 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0055044 GO:0061458 GO:0070647 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

ThiF UAE_UbL UBA_e1_thiolCys

Protein Analysis

638

Amino Acids

70.76

Weight (kDa)

5.55

Isoelectric Point (pI)

43.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ThiF	PF00899	10 - 433	1e-64	ThiF family
UAE_UbL	PF14732	442 - 534	9.1e-24	Ubiquitin/SUMO-activating enzyme ubiquitin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009128)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21470 AT2G21470
fragaria_vesca	FvH4_2g09750 FvH4_2g09750 FvH4_2g09750
malus_domestica	MD05G1060400.v1.1 MD10G1068200.v1.1
prunus_persica	Prupe.8G090100_v2.0.a1
pyrus_communis	pycom05g05140 pycom10g05400
rosa_chinensis	RchiOBHm_Chr6g0266041
rosa_laevigata	RLG00000014122
rosa_multiflora	Rmu_sc0000776.1_g000024
rosa_roxburghii	Rroxscaffold_174G00435160 Rroxscaffold_7G00202040
rosa_rugosa	Rorug06G0022900 Rorug06G0022900
rosa_samantha	Rh6AG144100 Rh6BG144600 Rh6CG141100 Rh6DG129000
rosa_wichuraiana	Rw6G012450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	726
Acc36I	ACCTGC	1 cut(s)	487
AccB1I	GGYRCC	1 cut(s)	35
AciI	CCGC	2 cut(s)	1050, 1354
AclI	AACGTT	1 cut(s)	315
AclWI	GGATC	2 cut(s)	857, 1557
AcsI	RAATTY	4 cut(s)	230, 934, 1034, 1598
AcuI	CTGAAG	2 cut(s)	855, 1538
AcyI	GRCGYC	1 cut(s)	36
AfaI	GTAC	2 cut(s)	435, 494
AfiI	CCNNNNNNNGG	2 cut(s)	373, 424
AflIII	ACRYGT	2 cut(s)	355, 436
AgsI	TTSAA	8 cut(s)	289, 325, 607, 961, 1100, 1280, 1742, 1797
AhdI	GACNNNNNGTC	2 cut(s)	1227, 1672
AhlI	ACTAGT	1 cut(s)	1523
AjnI	CCWGG	4 cut(s)	347, 372, 1449, 1750
AluBI	AGCT	9 cut(s)	79, 380, 633, 740, 1024, 1028, 1103, 1364, 1387
AluI	AGCT	9 cut(s)	79, 380, 633, 740, 1024, 1028, 1103, 1364, 1387
Alw21I	GWGCWC	1 cut(s)	518
Alw26I	GTCTC	4 cut(s)	749, 1172, 1304, 1712
AlwI	GGATC	2 cut(s)	857, 1557
AlwNI	CAGNNNCTG	2 cut(s)	878, 1652
Ama87I	CYCGRG	1 cut(s)	213
AoxI	GGCC	4 cut(s)	201, 236, 594, 1062
ApeKI	GCWGC	6 cut(s)	72, 377, 1046, 1192, 1421, 1478
ApoI	RAATTY	4 cut(s)	230, 934, 1034, 1598
AspLEI	GCGC	1 cut(s)	38
AspS9I	GGNCC	2 cut(s)	277, 1062
AsuHPI	GGTGA	3 cut(s)	439, 1454, 1820
AsuNHI	GCTAGC	2 cut(s)	629, 1024
AvaI	CYCGRG	1 cut(s)	213
AvaII	GGWCC	1 cut(s)	277
BanI	GGYRCC	1 cut(s)	35
BbsI	GAAGAC	1 cut(s)	684
Bbv12I	GWGCWC	1 cut(s)	518
BbvI	GCAGC	6 cut(s)	59, 389, 1033, 1179, 1433, 1490
BccI	CCATC	5 cut(s)	529, 617, 874, 1616, 1635
BcgI	CGANNNNNNTGC	2 cut(s)	541, 575
BciT130I	CCWGG	4 cut(s)	349, 374, 1451, 1752
BclI	TGATCA	2 cut(s)	709, 1018
BcoDI	GTCTC	4 cut(s)	749, 1172, 1304, 1712
BcuI	ACTAGT	1 cut(s)	1523
BfaI	CTAG	5 cut(s)	630, 893, 939, 1025, 1524
BfmI	CTRYAG	2 cut(s)	138, 1029
BfoI	RGCGCY	1 cut(s)	39
BfuAI	ACCTGC	1 cut(s)	487
BisI	GCNGC	7 cut(s)	73, 378, 1047, 1050, 1193, 1422, 1479
BlsI	GCNGC	7 cut(s)	74, 379, 1048, 1051, 1194, 1423, 1480
Bme1390I	CCNGG	4 cut(s)	349, 374, 1451, 1752
Bme18I	GGWCC	1 cut(s)	277
BmeRI	GACNNNNNGTC	2 cut(s)	1227, 1672
BmeT110I	CYCGRG	1 cut(s)	213
BmgT120I	GGNCC	2 cut(s)	277, 1062
BmiI	GGNNCC	7 cut(s)	37, 279, 416, 923, 1272, 1531, 1617
BmrFI	CCNGG	4 cut(s)	349, 374, 1451, 1752
BmrI	ACTGGG	1 cut(s)	420
BmsI	GCATC	6 cut(s)	208, 334, 790, 1086, 1242, 1715
BmtI	GCTAGC	2 cut(s)	633, 1028
BmuI	ACTGGG	1 cut(s)	420
BoxI	GACNNNNGTC	1 cut(s)	588
BpiI	GAAGAC	1 cut(s)	684
BpmI	CTGGAG	2 cut(s)	1500, 1736
BpuEI	CTTGAG	2 cut(s)	68, 971
BsaHI	GRCGYC	1 cut(s)	36
BsaJI	CCNNGG	3 cut(s)	198, 418, 882
BsaXI	ACNNNNNCTCC	2 cut(s)	502, 532
Bsc4I	CCNNNNNNNGG	2 cut(s)	373, 424
Bse1I	ACTGG	7 cut(s)	415, 618, 858, 1265, 1517, 1677, 1719
Bse3DI	GCAATG	1 cut(s)	1082
BseBI	CCWGG	4 cut(s)	349, 374, 1451, 1752
BseDI	CCNNGG	3 cut(s)	198, 418, 882
BseGI	GGATG	9 cut(s)	223, 349, 805, 1077, 1224, 1237, 1459, 1646, 1669
BseLI	CCNNNNNNNGG	2 cut(s)	373, 424
BseMI	GCAATG	1 cut(s)	1082
BseMII	CTCAG	2 cut(s)	1494, 1773
BseNI	ACTGG	7 cut(s)	415, 618, 858, 1265, 1517, 1677, 1719
BseRI	GAGGAG	2 cut(s)	767, 1622
BseXI	GCAGC	6 cut(s)	59, 389, 1033, 1179, 1433, 1490
BseYI	CCCAGC	1 cut(s)	1160
BsgI	GTGCAG	1 cut(s)	487
BshFI	GGCC	4 cut(s)	203, 238, 596, 1064
BshNI	GGYRCC	1 cut(s)	35
BsiHKAI	GWGCWC	1 cut(s)	518
BsiHKCI	CYCGRG	1 cut(s)	213
BslFI	GGGAC	3 cut(s)	418, 596, 1370
BslI	CCNNNNNNNGG	2 cut(s)	373, 424
BsmAI	GTCTC	4 cut(s)	749, 1172, 1304, 1712
BsmFI	GGGAC	3 cut(s)	418, 596, 1370
BsmI	GAATGC	1 cut(s)	470
BsnI	GGCC	4 cut(s)	203, 238, 596, 1064
BsoBI	CYCGRG	1 cut(s)	213
Bsp1286I	GDGCHC	1 cut(s)	518
Bsp1407I	TGTACA	1 cut(s)	433
Bsp143I	GATC	5 cut(s)	709, 862, 1018, 1329, 1549
Bsp19I	CCATGG	1 cut(s)	882
BspACI	CCGC	2 cut(s)	1050, 1354
BspANI	GGCC	4 cut(s)	203, 238, 596, 1064
BspCNI	CTCAG	2 cut(s)	1495, 1774
BspHI	TCATGA	1 cut(s)	972
BspLI	GGNNCC	7 cut(s)	37, 279, 416, 923, 1272, 1531, 1617
BspMI	ACCTGC	1 cut(s)	487
BspOI	GCTAGC	2 cut(s)	633, 1028
BspPI	GGATC	2 cut(s)	857, 1557
BspT107I	GGYRCC	1 cut(s)	35
BsrDI	GCAATG	1 cut(s)	1082
BsrGI	TGTACA	1 cut(s)	433
BsrI	ACTGG	7 cut(s)	415, 618, 858, 1265, 1517, 1677, 1719
BssECI	CCNNGG	3 cut(s)	198, 418, 882
BssMI	GATC	5 cut(s)	709, 862, 1018, 1329, 1549
BssNI	GRCGYC	1 cut(s)	36
BssT1I	CCWWGG	3 cut(s)	198, 418, 882
Bst2UI	CCWGG	4 cut(s)	349, 374, 1451, 1752
Bst4CI	ACNGT	6 cut(s)	309, 433, 770, 1183, 1343, 1770
BstACI	GRCGYC	1 cut(s)	36
BstAPI	GCANNNNNTGC	1 cut(s)	1157
BstAUI	TGTACA	1 cut(s)	433
BstC8I	GCNNGC	5 cut(s)	24, 77, 470, 631, 1026
BstDEI	CTNAG	2 cut(s)	1503, 1782
BstDSI	CCRYGG	1 cut(s)	882
BstENI	CCTNNNNNAGG	1 cut(s)	422
BstF5I	GGATG	9 cut(s)	223, 349, 805, 1077, 1224, 1237, 1459, 1646, 1669
BstH2I	RGCGCY	1 cut(s)	39
BstHHI	GCGC	1 cut(s)	38
BstKTI	GATC	5 cut(s)	712, 865, 1021, 1332, 1552
BstMAI	GTCTC	4 cut(s)	749, 1172, 1304, 1712
BstMBI	GATC	5 cut(s)	709, 862, 1018, 1329, 1549
BstMWI	GCNNNNNNNGC	6 cut(s)	190, 209, 218, 465, 1157, 1261
BstNI	CCWGG	4 cut(s)	349, 374, 1451, 1752
BstNSI	RCATGY	3 cut(s)	188, 359, 440
BstPAI	GACNNNNGTC	1 cut(s)	588
BstSCI	CCNGG	4 cut(s)	347, 372, 1449, 1750
BstSFI	CTRYAG	2 cut(s)	138, 1029
BstV1I	GCAGC	6 cut(s)	59, 389, 1033, 1179, 1433, 1490
BstV2I	GAAGAC	1 cut(s)	684
BstX2I	RGATCY	1 cut(s)	1549
BstYI	RGATCY	1 cut(s)	1549
BsuRI	GGCC	4 cut(s)	203, 238, 596, 1064
BtgI	CCRYGG	1 cut(s)	882
BtsCI	GGATG	9 cut(s)	223, 349, 805, 1077, 1224, 1237, 1459, 1646, 1669
BtsI	GCAGTG	2 cut(s)	535, 1065
BtsIMutI	CAGTG	6 cut(s)	535, 625, 865, 1065, 1272, 1684
BveI	ACCTGC	1 cut(s)	487
Cac8I	GCNNGC	5 cut(s)	24, 77, 470, 631, 1026
CaiI	CAGNNNCTG	2 cut(s)	878, 1652
CciI	TCATGA	1 cut(s)	972
CfoI	GCGC	1 cut(s)	38
Cfr13I	GGNCC	2 cut(s)	277, 1062
CseI	GACGC	1 cut(s)	1211
Csp6I	GTAC	2 cut(s)	434, 493
CspCI	CAANNNNNGTGG	4 cut(s)	899, 934, 1054, 1089
CviQI	GTAC	2 cut(s)	434, 493
DdeI	CTNAG	2 cut(s)	1503, 1782
DinI	GGCGCC	1 cut(s)	37
DpnI	GATC	5 cut(s)	711, 864, 1020, 1331, 1551
DpnII	GATC	5 cut(s)	709, 862, 1018, 1329, 1549
DraI	TTTAAA	1 cut(s)	304
DriI	GACNNNNNGTC	2 cut(s)	1227, 1672
Eam1105I	GACNNNNNGTC	2 cut(s)	1227, 1672
Eco130I	CCWWGG	3 cut(s)	198, 418, 882
Eco147I	AGGCCT	1 cut(s)	238
Eco47I	GGWCC	1 cut(s)	277
Eco57I	CTGAAG	2 cut(s)	855, 1538
Eco88I	CYCGRG	1 cut(s)	213
EcoNI	CCTNNNNNAGG	1 cut(s)	422
EcoO109I	RGGNCCY	1 cut(s)	277
EcoRII	CCWGG	4 cut(s)	347, 372, 1449, 1750
EcoT14I	CCWWGG	3 cut(s)	198, 418, 882
EgeI	GGCGCC	1 cut(s)	37
EheI	GGCGCC	1 cut(s)	37
ErhI	CCWWGG	3 cut(s)	198, 418, 882
FaqI	GGGAC	3 cut(s)	418, 596, 1370
FauI	CCCGC	1 cut(s)	1347
FbaI	TGATCA	2 cut(s)	709, 1018
Fnu4HI	GCNGC	7 cut(s)	73, 378, 1047, 1050, 1193, 1422, 1479
FokI	GGATG	9 cut(s)	230, 356, 812, 1064, 1224, 1231, 1466, 1653, 1676
Fsp4HI	GCNGC	7 cut(s)	73, 378, 1047, 1050, 1193, 1422, 1479
FspBI	CTAG	5 cut(s)	630, 893, 939, 1025, 1524
GlaI	GCGC	1 cut(s)	37
GluI	GCNGC	7 cut(s)	73, 378, 1047, 1050, 1193, 1422, 1479
GsaI	CCCAGC	1 cut(s)	1164
GsuI	CTGGAG	2 cut(s)	1500, 1736
HaeII	RGCGCY	1 cut(s)	39
HaeIII	GGCC	4 cut(s)	203, 238, 596, 1064
HgaI	GACGC	1 cut(s)	1211
HhaI	GCGC	1 cut(s)	38
Hin1I	GRCGYC	1 cut(s)	36
Hin6I	GCGC	1 cut(s)	36
HinP1I	GCGC	1 cut(s)	36
HincII	GTYRAC	1 cut(s)	824
HindII	GTYRAC	1 cut(s)	824
HindIII	AAGCTT	1 cut(s)	1385
HinfI	GANTC	5 cut(s)	88, 361, 589, 1483, 1883
HphI	GGTGA	3 cut(s)	439, 1454, 1820
Hpy166II	GTNNAC	2 cut(s)	535, 824
Hpy188I	TCNGA	6 cut(s)	640, 1309, 1504, 1711, 1774, 1783
Hpy188III	TCNNGA	8 cut(s)	85, 215, 950, 973, 1232, 1487, 1638, 1841
Hpy8I	GTNNAC	2 cut(s)	535, 824
Hpy99I	CGWCG	2 cut(s)	1850, 1853
HpyAV	CCTTC	4 cut(s)	436, 547, 1521, 1606
HpyCH4III	ACNGT	6 cut(s)	309, 433, 770, 1183, 1343, 1770
HpyCH4IV	ACGT	4 cut(s)	291, 315, 491, 1860
HpyF10VI	GCNNNNNNNGC	6 cut(s)	190, 209, 218, 465, 1157, 1261
HpyF3I	CTNAG	2 cut(s)	1503, 1782
HpySE526I	ACGT	4 cut(s)	291, 315, 491, 1860
Hsp92I	GRCGYC	1 cut(s)	36
HspAI	GCGC	1 cut(s)	36
KasI	GGCGCC	1 cut(s)	35
Ksp22I	TGATCA	2 cut(s)	709, 1018
Kzo9I	GATC	5 cut(s)	709, 862, 1018, 1329, 1549
LmnI	GCTCC	5 cut(s)	56, 487, 921, 1418, 1753
Lsp1109I	GCAGC	6 cut(s)	59, 389, 1033, 1179, 1433, 1490
LweI	GCATC	6 cut(s)	208, 334, 790, 1086, 1242, 1715
MaeI	CTAG	5 cut(s)	630, 893, 939, 1025, 1524
MaeII	ACGT	4 cut(s)	291, 315, 491, 1860
MaeIII	GTNAC	4 cut(s)	149, 427, 1039, 1519
MalI	GATC	5 cut(s)	711, 864, 1020, 1331, 1551
MboI	GATC	5 cut(s)	709, 862, 1018, 1329, 1549
MboII	GAAGA	7 cut(s)	662, 689, 708, 711, 775, 861, 1544
MfeI	CAATTG	1 cut(s)	1542
MflI	RGATCY	1 cut(s)	1549
MhlI	GDGCHC	1 cut(s)	518
Mly113I	GGCGCC	1 cut(s)	36
MlyI	GAGTC	2 cut(s)	82, 598
MmeI	TCCRAC	3 cut(s)	34, 1265, 1669
MseI	TTAA	9 cut(s)	227, 273, 303, 312, 392, 1377, 1659, 1872, 1904
MslI	CAYNNNNRTG	2 cut(s)	267, 1265
MspA1I	CMGCKG	1 cut(s)	380
MspR9I	CCNGG	4 cut(s)	349, 374, 1451, 1752
MunI	CAATTG	1 cut(s)	1542
Mva1269I	GAATGC	1 cut(s)	470
MvaI	CCWGG	4 cut(s)	349, 374, 1451, 1752
MwoI	GCNNNNNNNGC	6 cut(s)	190, 209, 218, 465, 1157, 1261
NarI	GGCGCC	1 cut(s)	36
NcoI	CCATGG	1 cut(s)	882
NdeII	GATC	5 cut(s)	709, 862, 1018, 1329, 1549
NheI	GCTAGC	2 cut(s)	629, 1024
NlaIV	GGNNCC	7 cut(s)	37, 279, 416, 923, 1272, 1531, 1617
NmuCI	GTSAC	1 cut(s)	427
NspI	RCATGY	3 cut(s)	188, 359, 440
PagI	TCATGA	1 cut(s)	972
PceI	AGGCCT	1 cut(s)	238
PciI	ACATGT	2 cut(s)	355, 436
PcsI	WCGNNNNNNNCGW	1 cut(s)	1857
PctI	GAATGC	1 cut(s)	470
PfeI	GAWTC	3 cut(s)	361, 1483, 1883
PflFI	GACNNNGTC	1 cut(s)	1862
PfoI	TCCNGGA	1 cut(s)	1750
PkrI	GCNGC	7 cut(s)	74, 379, 1048, 1051, 1194, 1423, 1480
PleI	GAGTC	2 cut(s)	82, 597
PluTI	GGCGCC	1 cut(s)	39
PpsI	GAGTC	2 cut(s)	82, 597
PpuMI	RGGWCCY	1 cut(s)	277
PscI	ACATGT	2 cut(s)	355, 436
PshAI	GACNNNNGTC	1 cut(s)	588
PsiI	TTATAA	1 cut(s)	726
Psp1406I	AACGTT	1 cut(s)	315
Psp5II	RGGWCCY	1 cut(s)	277
Psp6I	CCWGG	4 cut(s)	347, 372, 1449, 1750
PspFI	CCCAGC	1 cut(s)	1160
PspGI	CCWGG	4 cut(s)	347, 372, 1449, 1750
PspN4I	GGNNCC	7 cut(s)	37, 279, 416, 923, 1272, 1531, 1617
PspPI	GGNCC	2 cut(s)	277, 1062
PspPPI	RGGWCCY	1 cut(s)	277
PstNI	CAGNNNCTG	2 cut(s)	878, 1652
PsuI	RGATCY	1 cut(s)	1549
PsyI	GACNNNGTC	1 cut(s)	1862
PvuII	CAGCTG	1 cut(s)	380
RsaI	GTAC	2 cut(s)	435, 494
RsaNI	GTAC	2 cut(s)	434, 493
RseI	CAYNNNNRTG	2 cut(s)	267, 1265
SaqAI	TTAA	9 cut(s)	227, 273, 303, 312, 392, 1377, 1659, 1872, 1904
SatI	GCNGC	7 cut(s)	73, 378, 1047, 1050, 1193, 1422, 1479
Sau3AI	GATC	5 cut(s)	709, 862, 1018, 1329, 1549
Sau96I	GGNCC	2 cut(s)	277, 1062
SchI	GAGTC	2 cut(s)	82, 598
ScrFI	CCNGG	4 cut(s)	349, 374, 1451, 1752
SduI	GDGCHC	1 cut(s)	518
SfaNI	GCATC	6 cut(s)	208, 334, 790, 1086, 1242, 1715
SfcI	CTRYAG	2 cut(s)	138, 1029
SfoI	GGCGCC	1 cut(s)	37
SinI	GGWCC	1 cut(s)	277
SmiMI	CAYNNNNRTG	2 cut(s)	267, 1265
SmlI	CTYRAG	2 cut(s)	83, 950
SmoI	CTYRAG	2 cut(s)	83, 950
SpeI	ACTAGT	1 cut(s)	1523
SseBI	AGGCCT	1 cut(s)	238
SsiI	CCGC	2 cut(s)	1050, 1354
SspDI	GGCGCC	1 cut(s)	35
SspI	AATATT	1 cut(s)	1123
SspMI	CTAG	5 cut(s)	630, 893, 939, 1025, 1524
StuI	AGGCCT	1 cut(s)	238
StyD4I	CCNGG	4 cut(s)	347, 372, 1449, 1750
StyI	CCWWGG	3 cut(s)	198, 418, 882
TaaI	ACNGT	6 cut(s)	309, 433, 770, 1183, 1343, 1770
TaiI	ACGT	4 cut(s)	294, 318, 494, 1863
TaqI	TCGA	2 cut(s)	175, 396
TatI	WGTACW	1 cut(s)	433
TauI	GCSGC	1 cut(s)	1052
TfiI	GAWTC	3 cut(s)	361, 1483, 1883
Tru1I	TTAA	9 cut(s)	227, 273, 303, 312, 392, 1377, 1659, 1872, 1904
Tru9I	TTAA	9 cut(s)	227, 273, 303, 312, 392, 1377, 1659, 1872, 1904
TscAI	CASTG	6 cut(s)	542, 625, 865, 1072, 1272, 1684
TseFI	GTSAC	1 cut(s)	427
TseI	GCWGC	6 cut(s)	72, 377, 1046, 1192, 1421, 1478
Tsp45I	GTSAC	1 cut(s)	427
TspDTI	ATGAA	7 cut(s)	107, 477, 961, 989, 1409, 1449, 1470
TspGWI	ACGGA	1 cut(s)	1431
TspRI	CASTG	6 cut(s)	542, 625, 865, 1072, 1272, 1684
Tth111I	GACNNNGTC	1 cut(s)	1862
VpaK11BI	GGWCC	1 cut(s)	277
XagI	CCTNNNNNAGG	1 cut(s)	422
XapI	RAATTY	4 cut(s)	230, 934, 1034, 1598
XceI	RCATGY	3 cut(s)	188, 359, 440
XcmI	CCANNNNNNNNNTGG	1 cut(s)	46
XspI	CTAG	5 cut(s)	630, 893, 939, 1025, 1524

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.