No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g22501 |
| prunus_persica | Prupe.6G017600_v2.0.a1 Prupe.7G075600_v2.0.a1 |
| pyrus_communis | pycom03g01640 |
| rosa_chinensis | RchiOBHm_Chr3g0479931 |
| rosa_roxburghii | Rroxscaffold_1G00003390 Rroxscaffold_6G00401900 |
| rosa_rugosa | Rorug03G0179700 |
| rosa_samantha | Rh3AG230600 Rh3BG263300 Rh3CG260800 Rh3DG256600 Rh5BG540000 Rh5CG563000 Rh7DG470800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 257, 270 |
| AcuI | CTGAAG | 1 cut(s) | 195 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 330 |
| AgsI | TTSAA | 2 cut(s) | 63, 292 |
| AluBI | AGCT | 2 cut(s) | 144, 288 |
| AluI | AGCT | 2 cut(s) | 144, 288 |
| Alw26I | GTCTC | 1 cut(s) | 275 |
| AlwI | GGATC | 2 cut(s) | 257, 270 |
| AsuII | TTCGAA | 1 cut(s) | 230 |
| BamHI | GGATCC | 1 cut(s) | 262 |
| BccI | CCATC | 1 cut(s) | 177 |
| BclI | TGATCA | 1 cut(s) | 174 |
| BcoDI | GTCTC | 1 cut(s) | 275 |
| BfaI | CTAG | 1 cut(s) | 285 |
| BmiI | GGNNCC | 2 cut(s) | 264, 300 |
| Bpu14I | TTCGAA | 1 cut(s) | 230 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 330 |
| Bse3DI | GCAATG | 1 cut(s) | 261 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 330 |
| BseMI | GCAATG | 1 cut(s) | 261 |
| BseYI | CCCAGC | 1 cut(s) | 305 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 330 |
| BsmAI | GTCTC | 1 cut(s) | 275 |
| Bsp119I | TTCGAA | 1 cut(s) | 230 |
| Bsp143I | GATC | 2 cut(s) | 174, 262 |
| BspLI | GGNNCC | 2 cut(s) | 264, 300 |
| BspPI | GGATC | 2 cut(s) | 257, 270 |
| BspT104I | TTCGAA | 1 cut(s) | 230 |
| BsrDI | GCAATG | 1 cut(s) | 261 |
| BssMI | GATC | 2 cut(s) | 174, 262 |
| Bst4CI | ACNGT | 1 cut(s) | 8 |
| Bst6I | CTCTTC | 1 cut(s) | 61 |
| BstBI | TTCGAA | 1 cut(s) | 230 |
| BstKTI | GATC | 2 cut(s) | 177, 265 |
| BstMAI | GTCTC | 1 cut(s) | 275 |
| BstMBI | GATC | 2 cut(s) | 174, 262 |
| BstX2I | RGATCY | 1 cut(s) | 262 |
| BstYI | RGATCY | 1 cut(s) | 262 |
| BtsIMutI | CAGTG | 1 cut(s) | 4 |
| CviAII | CATG | 2 cut(s) | 73, 124 |
| CviJI | RGCY | 5 cut(s) | 144, 218, 244, 288, 299 |
| CviKI_1 | RGCY | 5 cut(s) | 144, 218, 244, 288, 299 |
| DpnI | GATC | 2 cut(s) | 176, 264 |
| DpnII | GATC | 2 cut(s) | 174, 262 |
| Eam1104I | CTCTTC | 1 cut(s) | 61 |
| EarI | CTCTTC | 1 cut(s) | 61 |
| Eco57I | CTGAAG | 1 cut(s) | 195 |
| FaeI | CATG | 2 cut(s) | 76, 127 |
| FaiI | YATR | 3 cut(s) | 74, 125, 278 |
| FatI | CATG | 2 cut(s) | 72, 123 |
| FbaI | TGATCA | 1 cut(s) | 174 |
| FspBI | CTAG | 1 cut(s) | 285 |
| GsaI | CCCAGC | 1 cut(s) | 309 |
| Hin1II | CATG | 2 cut(s) | 76, 127 |
| HinfI | GANTC | 5 cut(s) | 11, 29, 93, 158, 316 |
| Hpy188I | TCNGA | 4 cut(s) | 157, 174, 179, 321 |
| HpyAV | CCTTC | 3 cut(s) | 115, 219, 289 |
| HpyCH4III | ACNGT | 1 cut(s) | 8 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 17 |
| Hsp92II | CATG | 2 cut(s) | 76, 127 |
| Ksp22I | TGATCA | 1 cut(s) | 174 |
| Kzo9I | GATC | 2 cut(s) | 174, 262 |
| LmnI | GCTCC | 3 cut(s) | 132, 210, 304 |
| LpnPI | CCDG | 4 cut(s) | 94, 196, 208, 319 |
| MaeI | CTAG | 1 cut(s) | 285 |
| MalI | GATC | 2 cut(s) | 176, 264 |
| MboI | GATC | 2 cut(s) | 174, 262 |
| MboII | GAAGA | 7 cut(s) | 16, 48, 51, 100, 210, 219, 304 |
| MflI | RGATCY | 1 cut(s) | 262 |
| MlyI | GAGTC | 3 cut(s) | 20, 87, 152 |
| MnlI | CCTC | 2 cut(s) | 125, 253 |
| MslI | CAYNNNNRTG | 1 cut(s) | 122 |
| NdeII | GATC | 2 cut(s) | 174, 262 |
| NlaIII | CATG | 2 cut(s) | 76, 127 |
| NlaIV | GGNNCC | 2 cut(s) | 264, 300 |
| NspV | TTCGAA | 1 cut(s) | 230 |
| PfeI | GAWTC | 2 cut(s) | 29, 316 |
| PleI | GAGTC | 3 cut(s) | 19, 87, 152 |
| PpsI | GAGTC | 3 cut(s) | 19, 87, 152 |
| PspFI | CCCAGC | 1 cut(s) | 305 |
| PspN4I | GGNNCC | 2 cut(s) | 264, 300 |
| PsuI | RGATCY | 1 cut(s) | 262 |
| RseI | CAYNNNNRTG | 1 cut(s) | 122 |
| Sau3AI | GATC | 2 cut(s) | 174, 262 |
| SchI | GAGTC | 3 cut(s) | 20, 87, 152 |
| SetI | ASST | 2 cut(s) | 146, 290 |
| SfuI | TTCGAA | 1 cut(s) | 230 |
| SgeI | CNNG | 9 cut(s) | 85, 93, 109, 136, 195, 207, 297, 301, 318 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 122 |
| SspMI | CTAG | 1 cut(s) | 285 |
| TaaI | ACNGT | 1 cut(s) | 8 |
| TaqI | TCGA | 3 cut(s) | 27, 230, 314 |
| TfiI | GAWTC | 2 cut(s) | 29, 316 |
| TspDTI | ATGAA | 1 cut(s) | 89 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 253 |
| XspI | CTAG | 1 cut(s) | 285 |