Double-stranded RNA-binding protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G28380 |
| fragaria_vesca | FvH4_3g32200 |
| malus_domestica | MD03G1118400.v1.1 MD11G1136700.v1.1 |
| prunus_persica | Prupe.6G102200_v2.0.a1 |
| pyrus_communis | pycom11g11320 |
| rosa_chinensis | RchiOBHm_Chr5g0058811 |
| rosa_laevigata | RLG00000035253 |
| rosa_multiflora | Rmu_sc0005457.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00021580 |
| rosa_rugosa | Rorug05G0319300 |
| rosa_samantha | Rh5AG384100 Rh5BG396000 Rh5CG419900 Rh5DG411800 |
| rosa_wichuraiana | Rw5G036190 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 493 |
| AccB1I | GGYRCC | 2 cut(s) | 342, 718 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 715, 782 |
| AccII | CGCG | 3 cut(s) | 89, 213, 640 |
| AciI | CCGC | 6 cut(s) | 177, 180, 211, 213, 234, 311 |
| AclWI | GGATC | 2 cut(s) | 884, 922 |
| AcvI | CACGTG | 1 cut(s) | 63 |
| AfaI | GTAC | 4 cut(s) | 5, 317, 600, 819 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 277, 662, 715, 782 |
| AflIII | ACRYGT | 2 cut(s) | 60, 638 |
| AgeI | ACCGGT | 2 cut(s) | 832, 874 |
| AgsI | TTSAA | 3 cut(s) | 46, 100, 371 |
| AjnI | CCWGG | 2 cut(s) | 781, 795 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 595, 627 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 792, 824 |
| AluBI | AGCT | 9 cut(s) | 16, 25, 39, 302, 446, 474, 671, 851, 952 |
| AluI | AGCT | 9 cut(s) | 16, 25, 39, 302, 446, 474, 671, 851, 952 |
| Alw21I | GWGCWC | 2 cut(s) | 174, 304 |
| Alw26I | GTCTC | 1 cut(s) | 245 |
| AlwI | GGATC | 2 cut(s) | 884, 922 |
| AoxI | GGCC | 5 cut(s) | 27, 102, 165, 214, 334 |
| ApeKI | GCWGC | 7 cut(s) | 16, 39, 434, 443, 659, 668, 866 |
| AsiGI | ACCGGT | 2 cut(s) | 832, 874 |
| AspLEI | GCGC | 1 cut(s) | 91 |
| AspS9I | GGNCC | 3 cut(s) | 28, 77, 215 |
| AsuC2I | CCSGG | 1 cut(s) | 361 |
| AsuHPI | GGTGA | 1 cut(s) | 889 |
| AvaII | GGWCC | 1 cut(s) | 77 |
| BaeGI | GKGCMC | 2 cut(s) | 345, 750 |
| BanI | GGYRCC | 2 cut(s) | 342, 718 |
| BanII | GRGCYC | 2 cut(s) | 140, 304 |
| BbrPI | CACGTG | 1 cut(s) | 63 |
| Bbv12I | GWGCWC | 2 cut(s) | 174, 304 |
| BbvI | GCAGC | 7 cut(s) | 3, 26, 421, 455, 646, 680, 853 |
| BccI | CCATC | 4 cut(s) | 515, 627, 692, 709 |
| BceAI | ACGGC | 1 cut(s) | 136 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 539, 573 |
| BciT130I | CCWGG | 2 cut(s) | 783, 797 |
| BciVI | GTATCC | 1 cut(s) | 234 |
| BcnI | CCSGG | 1 cut(s) | 361 |
| BcoDI | GTCTC | 1 cut(s) | 245 |
| BfaI | CTAG | 1 cut(s) | 237 |
| BfmI | CTRYAG | 1 cut(s) | 660 |
| BfuI | GTATCC | 1 cut(s) | 234 |
| BglII | AGATCT | 1 cut(s) | 126 |
| BlpI | GCTNAGC | 1 cut(s) | 852 |
| Bme1390I | CCNGG | 3 cut(s) | 361, 783, 797 |
| Bme18I | GGWCC | 1 cut(s) | 77 |
| BmgT120I | GGNCC | 3 cut(s) | 28, 77, 215 |
| BmiI | GGNNCC | 5 cut(s) | 79, 217, 344, 720, 828 |
| BmrFI | CCNGG | 3 cut(s) | 361, 783, 797 |
| BmsI | GCATC | 1 cut(s) | 799 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 852 |
| BpuMI | CCSGG | 1 cut(s) | 361 |
| BsaAI | YACGTR | 1 cut(s) | 63 |
| BsaBI | GATNNNNATC | 1 cut(s) | 571 |
| BsaJI | CCNNGG | 4 cut(s) | 183, 211, 337, 796 |
| BsaWI | WCCGGW | 2 cut(s) | 832, 874 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 188, 218 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 277, 662, 715, 782 |
| Bse118I | RCCGGY | 2 cut(s) | 832, 874 |
| Bse1I | ACTGG | 4 cut(s) | 249, 627, 725, 914 |
| Bse3DI | GCAATG | 2 cut(s) | 305, 444 |
| Bse8I | GATNNNNATC | 1 cut(s) | 571 |
| BseBI | CCWGG | 2 cut(s) | 783, 797 |
| BseDI | CCNNGG | 4 cut(s) | 183, 211, 337, 796 |
| BseGI | GGATG | 5 cut(s) | 253, 684, 720, 906, 938 |
| BseJI | GATNNNNATC | 1 cut(s) | 571 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 277, 662, 715, 782 |
| BseMI | GCAATG | 2 cut(s) | 305, 444 |
| BseMII | CTCAG | 2 cut(s) | 489, 843 |
| BseNI | ACTGG | 4 cut(s) | 249, 627, 725, 914 |
| BseSI | GKGCMC | 2 cut(s) | 345, 750 |
| BseXI | GCAGC | 7 cut(s) | 3, 26, 421, 455, 646, 680, 853 |
| BseYI | CCCAGC | 1 cut(s) | 400 |
| BsgI | GTGCAG | 1 cut(s) | 744 |
| Bsh1236I | CGCG | 3 cut(s) | 89, 213, 640 |
| BshFI | GGCC | 5 cut(s) | 29, 104, 167, 216, 336 |
| BshNI | GGYRCC | 2 cut(s) | 342, 718 |
| BshTI | ACCGGT | 2 cut(s) | 832, 874 |
| BsiHKAI | GWGCWC | 2 cut(s) | 174, 304 |
| BsiSI | CCGG | 3 cut(s) | 360, 833, 875 |
| BsiWI | CGTACG | 1 cut(s) | 817 |
| BslFI | GGGAC | 3 cut(s) | 63, 376, 665 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 277, 662, 715, 782 |
| BsmAI | GTCTC | 1 cut(s) | 245 |
| BsmBI | CGTCTC | 1 cut(s) | 245 |
| BsmFI | GGGAC | 3 cut(s) | 63, 376, 665 |
| BsmI | GAATGC | 3 cut(s) | 66, 436, 583 |
| BsnI | GGCC | 5 cut(s) | 29, 104, 167, 216, 336 |
| Bsp1286I | GDGCHC | 5 cut(s) | 140, 174, 304, 345, 750 |
| Bsp1407I | TGTACA | 1 cut(s) | 3 |
| Bsp143I | GATC | 4 cut(s) | 126, 889, 903, 927 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 852 |
| BspACI | CCGC | 6 cut(s) | 177, 180, 211, 213, 234, 311 |
| BspANI | GGCC | 5 cut(s) | 29, 104, 167, 216, 336 |
| BspCNI | CTCAG | 2 cut(s) | 488, 844 |
| BspFNI | CGCG | 3 cut(s) | 89, 213, 640 |
| BspLI | GGNNCC | 5 cut(s) | 79, 217, 344, 720, 828 |
| BspMAI | CTGCAG | 1 cut(s) | 664 |
| BspPI | GGATC | 2 cut(s) | 884, 922 |
| BspT107I | GGYRCC | 2 cut(s) | 342, 718 |
| BsrDI | GCAATG | 2 cut(s) | 305, 444 |
| BsrFI | RCCGGY | 2 cut(s) | 832, 874 |
| BsrGI | TGTACA | 1 cut(s) | 3 |
| BsrI | ACTGG | 4 cut(s) | 249, 627, 725, 914 |
| BssAI | RCCGGY | 2 cut(s) | 832, 874 |
| BssECI | CCNNGG | 4 cut(s) | 183, 211, 337, 796 |
| BssMI | GATC | 4 cut(s) | 126, 889, 903, 927 |
| BssT1I | CCWWGG | 1 cut(s) | 337 |
| Bst2UI | CCWGG | 2 cut(s) | 783, 797 |
| Bst4CI | ACNGT | 2 cut(s) | 109, 367 |
| Bst6I | CTCTTC | 1 cut(s) | 877 |
| BstAUI | TGTACA | 1 cut(s) | 3 |
| BstBAI | YACGTR | 1 cut(s) | 63 |
| BstC8I | GCNNGC | 3 cut(s) | 27, 552, 849 |
| BstDEI | CTNAG | 2 cut(s) | 475, 852 |
| BstDSI | CCRYGG | 1 cut(s) | 211 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 275, 660 |
| BstF5I | GGATG | 5 cut(s) | 253, 684, 720, 906, 938 |
| BstFNI | CGCG | 3 cut(s) | 89, 213, 640 |
| BstHHI | GCGC | 1 cut(s) | 91 |
| BstKTI | GATC | 4 cut(s) | 129, 892, 906, 930 |
| BstMAI | GTCTC | 1 cut(s) | 245 |
| BstMBI | GATC | 4 cut(s) | 126, 889, 903, 927 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 22, 188, 440, 443, 665, 668, 853, 958, 967 |
| BstNI | CCWGG | 2 cut(s) | 783, 797 |
| BstSCI | CCNGG | 3 cut(s) | 359, 781, 795 |
| BstSFI | CTRYAG | 1 cut(s) | 660 |
| BstSLI | GKGCMC | 2 cut(s) | 345, 750 |
| BstUI | CGCG | 3 cut(s) | 89, 213, 640 |
| BstV1I | GCAGC | 7 cut(s) | 3, 26, 421, 455, 646, 680, 853 |
| BstX2I | RGATCY | 2 cut(s) | 126, 927 |
| BstYI | RGATCY | 2 cut(s) | 126, 927 |
| BsuI | GTATCC | 1 cut(s) | 234 |
| BsuRI | GGCC | 5 cut(s) | 29, 104, 167, 216, 336 |
| BtgI | CCRYGG | 1 cut(s) | 211 |
| BtgZI | GCGATG | 1 cut(s) | 776 |
| BtsCI | GGATG | 5 cut(s) | 253, 684, 720, 906, 938 |
| BtsIMutI | CAGTG | 3 cut(s) | 620, 732, 750 |
| Cac8I | GCNNGC | 3 cut(s) | 27, 552, 849 |
| CfoI | GCGC | 1 cut(s) | 91 |
| Cfr10I | RCCGGY | 2 cut(s) | 832, 874 |
| Cfr13I | GGNCC | 3 cut(s) | 28, 77, 215 |
| Cfr42I | CCGCGG | 1 cut(s) | 214 |
| CseI | GACGC | 2 cut(s) | 629, 646 |
| Csp6I | GTAC | 4 cut(s) | 4, 316, 599, 818 |
| CspAI | ACCGGT | 2 cut(s) | 832, 874 |
| CviQI | GTAC | 4 cut(s) | 4, 316, 599, 818 |
| DdeI | CTNAG | 2 cut(s) | 475, 852 |
| DpnI | GATC | 4 cut(s) | 128, 891, 905, 929 |
| DpnII | GATC | 4 cut(s) | 126, 889, 903, 927 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 493 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 493 |
| Eam1104I | CTCTTC | 1 cut(s) | 877 |
| EarI | CTCTTC | 1 cut(s) | 877 |
| EciI | GGCGGA | 1 cut(s) | 166 |
| Ecl136II | GAGCTC | 1 cut(s) | 302 |
| Eco130I | CCWWGG | 1 cut(s) | 337 |
| Eco24I | GRGCYC | 2 cut(s) | 140, 304 |
| Eco47I | GGWCC | 1 cut(s) | 77 |
| Eco53kI | GAGCTC | 1 cut(s) | 302 |
| Eco72I | CACGTG | 1 cut(s) | 63 |
| EcoICRI | GAGCTC | 1 cut(s) | 302 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 275, 660 |
| EcoO109I | RGGNCCY | 1 cut(s) | 77 |
| EcoRII | CCWGG | 2 cut(s) | 781, 795 |
| EcoT14I | CCWWGG | 1 cut(s) | 337 |
| EcoT38I | GRGCYC | 2 cut(s) | 140, 304 |
| ErhI | CCWWGG | 1 cut(s) | 337 |
| Esp3I | CGTCTC | 1 cut(s) | 245 |
| FaiI | YATR | 5 cut(s) | 516, 678, 711, 734, 842 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 257, 289 |
| FaqI | GGGAC | 3 cut(s) | 63, 376, 665 |
| FokI | GGATG | 5 cut(s) | 260, 671, 727, 913, 925 |
| FriOI | GRGCYC | 2 cut(s) | 140, 304 |
| FspBI | CTAG | 1 cut(s) | 237 |
| GlaI | GCGC | 1 cut(s) | 90 |
| GsaI | CCCAGC | 1 cut(s) | 404 |
| HaeIII | GGCC | 5 cut(s) | 29, 104, 167, 216, 336 |
| HapII | CCGG | 3 cut(s) | 360, 833, 875 |
| HgaI | GACGC | 2 cut(s) | 629, 646 |
| HhaI | GCGC | 1 cut(s) | 91 |
| Hin6I | GCGC | 1 cut(s) | 89 |
| HinP1I | GCGC | 1 cut(s) | 89 |
| HincII | GTYRAC | 1 cut(s) | 112 |
| HindII | GTYRAC | 1 cut(s) | 112 |
| HindIII | AAGCTT | 1 cut(s) | 950 |
| HinfI | GANTC | 5 cut(s) | 381, 494, 567, 651, 700 |
| HpaII | CCGG | 3 cut(s) | 360, 833, 875 |
| HphI | GGTGA | 1 cut(s) | 889 |
| Hpy166II | GTNNAC | 5 cut(s) | 112, 262, 318, 498, 644 |
| Hpy188I | TCNGA | 5 cut(s) | 459, 478, 689, 894, 983 |
| Hpy188III | TCNNGA | 4 cut(s) | 71, 80, 133, 942 |
| Hpy8I | GTNNAC | 5 cut(s) | 112, 262, 318, 498, 644 |
| HpyAV | CCTTC | 4 cut(s) | 63, 68, 779, 988 |
| HpyCH4III | ACNGT | 2 cut(s) | 109, 367 |
| HpyCH4IV | ACGT | 1 cut(s) | 62 |
| HpyCH4V | TGCA | 8 cut(s) | 19, 66, 150, 277, 437, 662, 761, 790 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 22, 188, 440, 443, 665, 668, 853, 958, 967 |
| HpyF3I | CTNAG | 2 cut(s) | 475, 852 |
| HpySE526I | ACGT | 1 cut(s) | 62 |
| HspAI | GCGC | 1 cut(s) | 89 |
| KspI | CCGCGG | 1 cut(s) | 214 |
| Kzo9I | GATC | 4 cut(s) | 126, 889, 903, 927 |
| LmnI | GCTCC | 7 cut(s) | 36, 299, 307, 665, 676, 832, 874 |
| Lsp1109I | GCAGC | 7 cut(s) | 3, 26, 421, 455, 646, 680, 853 |
| LweI | GCATC | 1 cut(s) | 799 |
| MaeI | CTAG | 1 cut(s) | 237 |
| MaeII | ACGT | 1 cut(s) | 62 |
| MaeIII | GTNAC | 2 cut(s) | 727, 835 |
| MalI | GATC | 4 cut(s) | 128, 891, 905, 929 |
| MboI | GATC | 4 cut(s) | 126, 889, 903, 927 |
| MboII | GAAGA | 6 cut(s) | 121, 439, 606, 894, 898, 937 |
| MflI | RGATCY | 2 cut(s) | 126, 927 |
| MhlI | GDGCHC | 5 cut(s) | 140, 174, 304, 345, 750 |
| MluCI | AATT | 5 cut(s) | 46, 282, 371, 464, 537 |
| MluI | ACGCGT | 1 cut(s) | 638 |
| MlyI | GAGTC | 2 cut(s) | 503, 694 |
| MmeI | TCCRAC | 4 cut(s) | 231, 277, 712, 934 |
| MseI | TTAA | 1 cut(s) | 117 |
| MspA1I | CMGCKG | 2 cut(s) | 16, 213 |
| MspI | CCGG | 3 cut(s) | 360, 833, 875 |
| MspR9I | CCNGG | 3 cut(s) | 361, 783, 797 |
| Mva1269I | GAATGC | 3 cut(s) | 66, 436, 583 |
| MvaI | CCWGG | 2 cut(s) | 783, 797 |
| MvnI | CGCG | 3 cut(s) | 89, 213, 640 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 22, 188, 440, 443, 665, 668, 853, 958, 967 |
| NciI | CCSGG | 1 cut(s) | 361 |
| NdeII | GATC | 4 cut(s) | 126, 889, 903, 927 |
| NlaIV | GGNNCC | 5 cut(s) | 79, 217, 344, 720, 828 |
| NmeAIII | GCCGAG | 2 cut(s) | 193, 208 |
| NmuCI | GTSAC | 2 cut(s) | 727, 835 |
| PctI | GAATGC | 3 cut(s) | 66, 436, 583 |
| PfeI | GAWTC | 3 cut(s) | 381, 567, 651 |
| Pfl23II | CGTACG | 1 cut(s) | 817 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 715, 782 |
| PfoI | TCCNGGA | 1 cut(s) | 781 |
| PinAI | ACCGGT | 2 cut(s) | 832, 874 |
| PleI | GAGTC | 2 cut(s) | 502, 694 |
| PmaCI | CACGTG | 1 cut(s) | 63 |
| PmlI | CACGTG | 1 cut(s) | 63 |
| PpsI | GAGTC | 2 cut(s) | 502, 694 |
| Ppu21I | YACGTR | 1 cut(s) | 63 |
| PpuMI | RGGWCCY | 1 cut(s) | 77 |
| Psp124BI | GAGCTC | 1 cut(s) | 304 |
| Psp5II | RGGWCCY | 1 cut(s) | 77 |
| Psp6I | CCWGG | 2 cut(s) | 781, 795 |
| PspCI | CACGTG | 1 cut(s) | 63 |
| PspFI | CCCAGC | 1 cut(s) | 400 |
| PspGI | CCWGG | 2 cut(s) | 781, 795 |
| PspLI | CGTACG | 1 cut(s) | 817 |
| PspN4I | GGNNCC | 5 cut(s) | 79, 217, 344, 720, 828 |
| PspPI | GGNCC | 3 cut(s) | 28, 77, 215 |
| PspPPI | RGGWCCY | 1 cut(s) | 77 |
| PstI | CTGCAG | 1 cut(s) | 664 |
| PsuI | RGATCY | 2 cut(s) | 126, 927 |
| PvuII | CAGCTG | 1 cut(s) | 16 |
| RsaI | GTAC | 4 cut(s) | 5, 317, 600, 819 |
| RsaNI | GTAC | 4 cut(s) | 4, 316, 599, 818 |
| SacI | GAGCTC | 1 cut(s) | 304 |
| SacII | CCGCGG | 1 cut(s) | 214 |
| SaqAI | TTAA | 1 cut(s) | 117 |
| Sau3AI | GATC | 4 cut(s) | 126, 889, 903, 927 |
| Sau96I | GGNCC | 3 cut(s) | 28, 77, 215 |
| SchI | GAGTC | 2 cut(s) | 503, 694 |
| ScrFI | CCNGG | 3 cut(s) | 361, 783, 797 |
| SduI | GDGCHC | 5 cut(s) | 140, 174, 304, 345, 750 |
| SfaNI | GCATC | 1 cut(s) | 799 |
| SfcI | CTRYAG | 1 cut(s) | 660 |
| Sfr303I | CCGCGG | 1 cut(s) | 214 |
| SgrAI | CRCCGGYG | 1 cut(s) | 874 |
| SgrBI | CCGCGG | 1 cut(s) | 214 |
| SinI | GGWCC | 1 cut(s) | 77 |
| Sse9I | AATT | 5 cut(s) | 46, 282, 371, 464, 537 |
| SsiI | CCGC | 6 cut(s) | 177, 180, 211, 213, 234, 311 |
| SspMI | CTAG | 1 cut(s) | 237 |
| SstI | GAGCTC | 1 cut(s) | 304 |
| StyD4I | CCNGG | 3 cut(s) | 359, 781, 795 |
| StyI | CCWWGG | 1 cut(s) | 337 |
| TaaI | ACNGT | 2 cut(s) | 109, 367 |
| TaiI | ACGT | 1 cut(s) | 65 |
| TaqI | TCGA | 3 cut(s) | 132, 575, 918 |
| TasI | AATT | 5 cut(s) | 46, 282, 371, 464, 537 |
| TatI | WGTACW | 2 cut(s) | 3, 315 |
| TauI | GCSGC | 4 cut(s) | 182, 216, 236, 313 |
| TfiI | GAWTC | 3 cut(s) | 381, 567, 651 |
| Tru1I | TTAA | 1 cut(s) | 117 |
| Tru9I | TTAA | 1 cut(s) | 117 |
| TscAI | CASTG | 3 cut(s) | 627, 732, 750 |
| TseFI | GTSAC | 2 cut(s) | 727, 835 |
| TseI | GCWGC | 7 cut(s) | 16, 39, 434, 443, 659, 668, 866 |
| Tsp45I | GTSAC | 2 cut(s) | 727, 835 |
| TspDTI | ATGAA | 1 cut(s) | 603 |
| TspGWI | ACGGA | 1 cut(s) | 149 |
| TspRI | CASTG | 3 cut(s) | 627, 732, 750 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 715, 782 |
| VpaK11BI | GGWCC | 1 cut(s) | 77 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 275, 660 |
| XspI | CTAG | 1 cut(s) | 237 |