Rroxscaffold_1G00048120

UDP-Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
68135827 .. 68137187
1361 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00048120.1

Sequence Viewer

Length: 1287 bp
ATGGATCCCTCGAGCTTCCACATAGCCATGTTCCCATGGTTCGCCATGGGTCACATGACCCCTTATGTCCACCTCGCCAACGAGCTCGCCTCTCGCGGCCACCGCATCACTATCTTGGTTCCCAAGAAAGCTCGAGACCAGCTCGAACACCTCAACCTGCACACCAACCTCATCATCTTCTGCCCTGTCCTCGTCCCCCACTTTGAGGGCCTCCCCGAAGGCACCGAAACCGCCTCCGAGATCCCCTTATCAGCCAACGGACTCCTCGCTGCAGCCGTGGACAAAACCCGGAAGCAGCTCGAGGAGTACCTAGAGGCTCATAAGCCGGACATGGTCTTCTACGACACTGCGTATTGGATACCGGAGATTGCTAGAAAGCTGGGGATTAAGACCGTTTGCTACAATGTCGTTTGCGCGGCAGCTCTTGCCATTACACTTGTCCCAGCTAGGAAACTGCCCATTACGCCGGAAGACCTTGAGAATCCGCCGGCCGGGTACCCTTCCAAGACGGTCGTGCTTCGCGGGGCAGAGGCCCGGTCTTTGATGTTCATTACGATGCCGTTTGGAGATGGGATCACATTTTACGACAGGACGGTAAGGGCGTTGAGAGAATGTGATGCCATATCTATCAGGACATGCAGAGAGTTAGAGGGTGATTTGTGTGATTACATGGAAGCTCAGTTTAACAAAACTGTGCTTTTAACTGGGCCGGTGTTAGGTCTCGGAGATGAGAAAGACAAGTACATTCTTGACAAGGACCAATTTCAAGAGCTGTTGTTAGGGTTTGAGCTAACAGGGTTGCCATTTTTTATAGTACTGAAGCCACCTATGGGATGTGATAGTGTGGAAGAGGCACTGCCTCAAGGGTTTGAGGAAAGGGTTAAAGGGAGAGGGGTGGTGTTTGGGGGTTGGGTTCAGCAACCACTTATCTTGAGGCACGCGTCGGTCGGGTGCTTTGTGAATCACTGTGGGTTTGGTTCAATGTGGGAGTCCTTGCTGACCAACAATCAGATTGTGCTGGTGCCGCACTTGGGCGATCAAATGTTGAACACCAAGCTACTGGTGAATGAGCTCAAGGTTGCAGTGGAGGTGGAGAGGGAAGAAAATCGGTGGTTTTCGAAGGAAAGCTTGAGCAAAGCTATTAGAAGTGTGATGGATAAAGAGAGTGAGGTGGGTGTTATGGTGAAGAAAAACCATGCCAAGTGGACTAAGACACTATCAAGTCCGAGGTATATGAGTGGTTATGTTGATAGATTTGTCCAGAGTCTGAAAGATATTAGTAAATAG

Protein Analysis

428

Amino Acids

48.08

Weight (kDa)

6.09

Isoelectric Point (pI)

40.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 303 - 389 1.6e-08 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 165
Acc65I GGTACC 1 cut(s) 495
AccB1I GGYRCC 3 cut(s) 221, 495, 1021
AccII CGCG 4 cut(s) 96, 416, 522, 941
AciI CCGC 7 cut(s) 96, 103, 231, 416, 485, 522, 1025
AclWI GGATC 3 cut(s) 12, 235, 581
AcoI YGGCCR 2 cut(s) 97, 489
AcuI CTGAAG 1 cut(s) 839
AfaI GTAC 4 cut(s) 308, 497, 743, 816
AfiI CCNNNNNNNGG 5 cut(s) 205, 491, 716, 830, 1031
AflIII ACRYGT 1 cut(s) 939
AgsI TTSAA 3 cut(s) 767, 981, 1048
Alw21I GWGCWC 2 cut(s) 87, 1074
Alw26I GTCTC 2 cut(s) 129, 725
AlwI GGATC 3 cut(s) 12, 235, 581
AlwNI CAGNNNCTG 1 cut(s) 1267
Ama87I CYCGRG 3 cut(s) 10, 132, 299
AoxI GGCC 5 cut(s) 97, 208, 489, 531, 707
ApeKI GCWGC 4 cut(s) 269, 272, 295, 419
Asp718I GGTACC 1 cut(s) 495
AspLEI GCGC 1 cut(s) 416
AspS9I GGNCC 4 cut(s) 208, 532, 707, 757
AsuC2I CCSGG 3 cut(s) 289, 493, 535
AsuHPI GGTGA 3 cut(s) 665, 1075, 1195
AsuII TTCGAA 1 cut(s) 1118
AvaI CYCGRG 3 cut(s) 10, 132, 299
AvaII GGWCC 1 cut(s) 757
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 3 cut(s) 221, 495, 1021
BanII GRGCYC 2 cut(s) 87, 1074
BbsI GAAGAC 2 cut(s) 328, 477
Bbv12I GWGCWC 2 cut(s) 87, 1074
BbvI GCAGC 4 cut(s) 256, 284, 307, 431
BccI CCATC 2 cut(s) 563, 1147
BceAI ACGGC 2 cut(s) 260, 544
BciVI GTATCC 1 cut(s) 351
BcnI CCSGG 3 cut(s) 289, 493, 535
BcoDI GTCTC 2 cut(s) 129, 725
BfaI CTAG 3 cut(s) 311, 372, 447
BfmI CTRYAG 1 cut(s) 270
BfuAI ACCTGC 1 cut(s) 165
BfuI GTATCC 1 cut(s) 351
BisI GCNGC 7 cut(s) 97, 270, 273, 296, 417, 420, 1025
BlsI GCNGC 7 cut(s) 98, 271, 274, 297, 418, 421, 1026
BmcAI AGTACT 1 cut(s) 816
Bme1390I CCNGG 3 cut(s) 289, 493, 535
Bme18I GGWCC 1 cut(s) 757
BmeT110I CYCGRG 3 cut(s) 10, 132, 299
BmgT120I GGNCC 4 cut(s) 208, 532, 707, 757
BmiI GGNNCC 5 cut(s) 6, 120, 223, 497, 1023
BmrFI CCNGG 3 cut(s) 289, 493, 535
BmrI ACTGGG 1 cut(s) 714
BmsI GCATC 3 cut(s) 114, 546, 607
BmuI ACTGGG 1 cut(s) 714
BpiI GAAGAC 2 cut(s) 328, 477
BplI GAGNNNNNCTC 4 cut(s) 74, 106, 126, 158
Bpu14I TTCGAA 1 cut(s) 1118
BpuEI CTTGAG 5 cut(s) 497, 846, 952, 1058, 1150
BpuMI CCSGG 3 cut(s) 289, 493, 535
BsaI GGTCTC 2 cut(s) 129, 725
BsaJI CCNNGG 4 cut(s) 35, 45, 276, 1226
BsaWI WCCGGW 1 cut(s) 361
Bsc4I CCNNNNNNNGG 5 cut(s) 205, 491, 716, 830, 1031
Bse118I RCCGGY 2 cut(s) 487, 709
Bse1I ACTGG 2 cut(s) 709, 1065
BseDI CCNNGG 4 cut(s) 35, 45, 276, 1226
BseGI GGATG 1 cut(s) 839
BseLI CCNNNNNNNGG 5 cut(s) 205, 491, 716, 830, 1031
BseMII CTCAG 1 cut(s) 692
BseNI ACTGG 2 cut(s) 709, 1065
BseRI GAGGAG 2 cut(s) 254, 317
BseX3I CGGCCG 1 cut(s) 489
BseXI GCAGC 4 cut(s) 256, 284, 307, 431
BseYI CCCAGC 2 cut(s) 379, 442
BsgI GTGCAG 1 cut(s) 143
Bsh1236I CGCG 4 cut(s) 96, 416, 522, 941
Bsh1285I CGRYCG 3 cut(s) 492, 513, 948
BshFI GGCC 5 cut(s) 99, 210, 491, 533, 709
BshNI GGYRCC 3 cut(s) 221, 495, 1021
BsiEI CGRYCG 3 cut(s) 492, 513, 948
BsiHKAI GWGCWC 2 cut(s) 87, 1074
BsiHKCI CYCGRG 3 cut(s) 10, 132, 299
BsiSI CCGG 8 cut(s) 289, 326, 362, 467, 488, 492, 535, 710
BslFI GGGAC 2 cut(s) 179, 425
BslI CCNNNNNNNGG 5 cut(s) 205, 491, 716, 830, 1031
BsmAI GTCTC 2 cut(s) 129, 725
BsmFI GGGAC 2 cut(s) 179, 425
BsnI GGCC 5 cut(s) 99, 210, 491, 533, 709
Bso31I GGTCTC 2 cut(s) 129, 725
BsoBI CYCGRG 3 cut(s) 10, 132, 299
Bsp119I TTCGAA 1 cut(s) 1118
Bsp1286I GDGCHC 2 cut(s) 87, 1074
Bsp143I GATC 4 cut(s) 4, 240, 573, 1036
Bsp19I CCATGG 2 cut(s) 35, 45
BspACI CCGC 7 cut(s) 96, 103, 231, 416, 485, 522, 1025
BspANI GGCC 5 cut(s) 99, 210, 491, 533, 709
BspCNI CTCAG 1 cut(s) 691
BspFNI CGCG 4 cut(s) 96, 416, 522, 941
BspLI GGNNCC 5 cut(s) 6, 120, 223, 497, 1023
BspMAI CTGCAG 1 cut(s) 274
BspMI ACCTGC 1 cut(s) 165
BspPI GGATC 3 cut(s) 12, 235, 581
BspT104I TTCGAA 1 cut(s) 1118
BspT107I GGYRCC 3 cut(s) 221, 495, 1021
BspTNI GGTCTC 2 cut(s) 129, 725
BsrFI RCCGGY 2 cut(s) 487, 709
BsrI ACTGG 2 cut(s) 709, 1065
BssAI RCCGGY 2 cut(s) 487, 709
BssECI CCNNGG 4 cut(s) 35, 45, 276, 1226
BssMI GATC 4 cut(s) 4, 240, 573, 1036
BssT1I CCWWGG 2 cut(s) 35, 45
Bst4CI ACNGT 5 cut(s) 394, 511, 595, 694, 968
Bst6I CTCTTC 1 cut(s) 843
BstAPI GCANNNNNTGC 1 cut(s) 425
BstBI TTCGAA 1 cut(s) 1118
BstC8I GCNNGC 3 cut(s) 87, 489, 939
BstDEI CTNAG 2 cut(s) 678, 1209
BstDSI CCRYGG 3 cut(s) 35, 45, 276
BstF5I GGATG 1 cut(s) 839
BstFNI CGCG 4 cut(s) 96, 416, 522, 941
BstHHI GCGC 1 cut(s) 416
BstKTI GATC 4 cut(s) 7, 243, 576, 1039
BstMAI GTCTC 2 cut(s) 129, 725
BstMBI GATC 4 cut(s) 4, 240, 573, 1036
BstMCI CGRYCG 3 cut(s) 492, 513, 948
BstMWI GCNNNNNNNGC 4 cut(s) 102, 425, 463, 1024
BstNSI RCATGY 1 cut(s) 639
BstSCI CCNGG 3 cut(s) 287, 491, 533
BstSFI CTRYAG 1 cut(s) 270
BstUI CGCG 4 cut(s) 96, 416, 522, 941
BstV1I GCAGC 4 cut(s) 256, 284, 307, 431
BstV2I GAAGAC 2 cut(s) 328, 477
BstX2I RGATCY 2 cut(s) 4, 240
BstXI CCANNNNNNTGG 1 cut(s) 1060
BstYI RGATCY 2 cut(s) 4, 240
BstZI CGGCCG 1 cut(s) 489
BsuI GTATCC 1 cut(s) 351
BsuRI GGCC 5 cut(s) 99, 210, 491, 533, 709
BtgI CCRYGG 3 cut(s) 35, 45, 276
BtsCI GGATG 1 cut(s) 839
BtsI GCAGTG 3 cut(s) 345, 854, 1089
BtsIMutI CAGTG 4 cut(s) 345, 854, 964, 1089
BveI ACCTGC 1 cut(s) 165
Cac8I GCNNGC 3 cut(s) 87, 489, 939
CaiI CAGNNNCTG 1 cut(s) 1267
CfoI GCGC 1 cut(s) 416
Cfr10I RCCGGY 2 cut(s) 487, 709
Cfr13I GGNCC 4 cut(s) 208, 532, 707, 757
CseI GACGC 1 cut(s) 930
Csp6I GTAC 4 cut(s) 307, 496, 742, 815
CspCI CAANNNNNGTGG 2 cut(s) 912, 947
CviAII CATG 8 cut(s) 28, 36, 46, 55, 331, 636, 670, 1196
CviQI GTAC 4 cut(s) 307, 496, 742, 815
DdeI CTNAG 2 cut(s) 678, 1209
DpnI GATC 4 cut(s) 6, 242, 575, 1038
DpnII GATC 4 cut(s) 4, 240, 573, 1036
EaeI YGGCCR 2 cut(s) 97, 489
EagI CGGCCG 1 cut(s) 489
Eam1104I CTCTTC 1 cut(s) 843
EarI CTCTTC 1 cut(s) 843
EciI GGCGGA 1 cut(s) 474
Ecl136II GAGCTC 2 cut(s) 85, 1072
EclXI CGGCCG 1 cut(s) 489
Eco130I CCWWGG 2 cut(s) 35, 45
Eco24I GRGCYC 2 cut(s) 87, 1074
Eco31I GGTCTC 2 cut(s) 129, 725
Eco47I GGWCC 1 cut(s) 757
Eco52I CGGCCG 1 cut(s) 489
Eco53kI GAGCTC 2 cut(s) 85, 1072
Eco57I CTGAAG 1 cut(s) 839
Eco88I CYCGRG 3 cut(s) 10, 132, 299
EcoICRI GAGCTC 2 cut(s) 85, 1072
EcoO109I RGGNCCY 1 cut(s) 208
EcoT14I CCWWGG 2 cut(s) 35, 45
EcoT38I GRGCYC 2 cut(s) 87, 1074
ErhI CCWWGG 2 cut(s) 35, 45
FaeI CATG 8 cut(s) 31, 39, 49, 58, 334, 639, 673, 1199
FalI AAGNNNNNCTT 2 cut(s) 1112, 1144
FaqI GGGAC 2 cut(s) 179, 425
FatI CATG 8 cut(s) 27, 35, 45, 54, 330, 635, 669, 1195
FauI CCCGC 1 cut(s) 515
Fnu4HI GCNGC 7 cut(s) 97, 270, 273, 296, 417, 420, 1025
FokI GGATG 1 cut(s) 846
FriOI GRGCYC 2 cut(s) 87, 1074
Fsp4HI GCNGC 7 cut(s) 97, 270, 273, 296, 417, 420, 1025
FspBI CTAG 3 cut(s) 311, 372, 447
GlaI GCGC 1 cut(s) 415
GluI GCNGC 7 cut(s) 97, 270, 273, 296, 417, 420, 1025
GsaI CCCAGC 2 cut(s) 383, 446
HaeIII GGCC 5 cut(s) 99, 210, 491, 533, 709
HapII CCGG 8 cut(s) 289, 326, 362, 467, 488, 492, 535, 710
HgaI GACGC 1 cut(s) 930
HhaI GCGC 1 cut(s) 416
Hin1II CATG 8 cut(s) 31, 39, 49, 58, 334, 639, 673, 1199
Hin6I GCGC 1 cut(s) 414
HinP1I GCGC 1 cut(s) 414
HindIII AAGCTT 1 cut(s) 1126
HinfI GANTC 5 cut(s) 261, 481, 961, 989, 1264
HpaII CCGG 8 cut(s) 289, 326, 362, 467, 488, 492, 535, 710
HphI GGTGA 3 cut(s) 665, 1075, 1195
Hpy166II GTNNAC 3 cut(s) 70, 280, 1206
Hpy188I TCNGA 5 cut(s) 238, 725, 1011, 1227, 1269
Hpy188III TCNNGA 6 cut(s) 134, 631, 749, 767, 931, 1261
Hpy8I GTNNAC 3 cut(s) 70, 280, 1206
Hpy99I CGWCG 1 cut(s) 946
HpyAV CCTTC 3 cut(s) 212, 510, 1114
HpyCH4III ACNGT 5 cut(s) 394, 511, 595, 694, 968
HpyCH4V TGCA 4 cut(s) 160, 272, 639, 1082
HpyF10VI GCNNNNNNNGC 4 cut(s) 102, 425, 463, 1024
HpyF3I CTNAG 2 cut(s) 678, 1209
Hsp92II CATG 8 cut(s) 31, 39, 49, 58, 334, 639, 673, 1199
HspAI GCGC 1 cut(s) 414
KpnI GGTACC 1 cut(s) 499
KroI GCCGGC 1 cut(s) 487
KroNI GCCGGC 1 cut(s) 489
Kzo9I GATC 4 cut(s) 4, 240, 573, 1036
Lsp1109I GCAGC 4 cut(s) 256, 284, 307, 431
LweI GCATC 3 cut(s) 114, 546, 607
MaeI CTAG 3 cut(s) 311, 372, 447
MaeIII GTNAC 1 cut(s) 50
MalI GATC 4 cut(s) 6, 242, 575, 1038
MboI GATC 4 cut(s) 4, 240, 573, 1036
MboII GAAGA 6 cut(s) 169, 328, 482, 860, 1112, 1198
MflI RGATCY 2 cut(s) 4, 240
MhlI GDGCHC 2 cut(s) 87, 1074
MluCI AATT 1 cut(s) 761
MluI ACGCGT 1 cut(s) 939
MlyI GAGTC 3 cut(s) 255, 998, 1273
MroNI GCCGGC 1 cut(s) 487
MseI TTAA 4 cut(s) 387, 684, 701, 882
MslI CAYNNNNRTG 2 cut(s) 26, 554
MspI CCGG 8 cut(s) 289, 326, 362, 467, 488, 492, 535, 710
MspR9I CCNGG 3 cut(s) 289, 493, 535
MvnI CGCG 4 cut(s) 96, 416, 522, 941
MwoI GCNNNNNNNGC 4 cut(s) 102, 425, 463, 1024
NaeI GCCGGC 1 cut(s) 489
NciI CCSGG 3 cut(s) 289, 493, 535
NcoI CCATGG 2 cut(s) 35, 45
NdeII GATC 4 cut(s) 4, 240, 573, 1036
NgoMIV GCCGGC 1 cut(s) 487
NlaIII CATG 8 cut(s) 31, 39, 49, 58, 334, 639, 673, 1199
NlaIV GGNNCC 5 cut(s) 6, 120, 223, 497, 1023
NmuCI GTSAC 1 cut(s) 50
NspI RCATGY 1 cut(s) 639
NspV TTCGAA 1 cut(s) 1118
PaeR7I CTCGAG 3 cut(s) 10, 132, 299
PcsI WCGNNNNNNNCGW 2 cut(s) 273, 599
PdiI GCCGGC 1 cut(s) 489
PfeI GAWTC 2 cut(s) 481, 961
PflFI GACNNNGTC 1 cut(s) 332
PkrI GCNGC 7 cut(s) 98, 271, 274, 297, 418, 421, 1026
PleI GAGTC 3 cut(s) 255, 997, 1272
PpsI GAGTC 3 cut(s) 255, 997, 1272
Psp124BI GAGCTC 2 cut(s) 87, 1074
PspFI CCCAGC 2 cut(s) 379, 442
PspN4I GGNNCC 5 cut(s) 6, 120, 223, 497, 1023
PspPI GGNCC 4 cut(s) 208, 532, 707, 757
PspXI VCTCGAGB 2 cut(s) 10, 299
PstI CTGCAG 1 cut(s) 274
PstNI CAGNNNCTG 1 cut(s) 1267
PsuI RGATCY 2 cut(s) 4, 240
PsyI GACNNNGTC 1 cut(s) 332
RsaI GTAC 4 cut(s) 308, 497, 743, 816
RsaNI GTAC 4 cut(s) 307, 496, 742, 815
RseI CAYNNNNRTG 2 cut(s) 26, 554
SacI GAGCTC 2 cut(s) 87, 1074
SaqAI TTAA 4 cut(s) 387, 684, 701, 882
SatI GCNGC 7 cut(s) 97, 270, 273, 296, 417, 420, 1025
Sau3AI GATC 4 cut(s) 4, 240, 573, 1036
Sau96I GGNCC 4 cut(s) 208, 532, 707, 757
ScaI AGTACT 1 cut(s) 816
SchI GAGTC 3 cut(s) 255, 998, 1273
ScrFI CCNGG 3 cut(s) 289, 493, 535
SduI GDGCHC 2 cut(s) 87, 1074
SfaNI GCATC 3 cut(s) 114, 546, 607
SfcI CTRYAG 1 cut(s) 270
Sfr274I CTCGAG 3 cut(s) 10, 132, 299
SfuI TTCGAA 1 cut(s) 1118
SinI GGWCC 1 cut(s) 757
SlaI CTCGAG 3 cut(s) 10, 132, 299
SmiMI CAYNNNNRTG 2 cut(s) 26, 554
SmlI CTYRAG 8 cut(s) 10, 132, 299, 476, 861, 931, 1073, 1129
SmoI CTYRAG 8 cut(s) 10, 132, 299, 476, 861, 931, 1073, 1129
Sse9I AATT 1 cut(s) 761
SsiI CCGC 7 cut(s) 96, 103, 231, 416, 485, 522, 1025
SspMI CTAG 3 cut(s) 311, 372, 447
SstI GAGCTC 2 cut(s) 87, 1074
StyD4I CCNGG 3 cut(s) 287, 491, 533
StyI CCWWGG 2 cut(s) 35, 45
TaaI ACNGT 5 cut(s) 394, 511, 595, 694, 968
TaqI TCGA 5 cut(s) 11, 133, 144, 300, 1118
TaqII GACCGA 1 cut(s) 934
TasI AATT 1 cut(s) 761
TatI WGTACW 2 cut(s) 741, 814
TauI GCSGC 3 cut(s) 99, 419, 1027
TfiI GAWTC 2 cut(s) 481, 961
Tru1I TTAA 4 cut(s) 387, 684, 701, 882
Tru9I TTAA 4 cut(s) 387, 684, 701, 882
TscAI CASTG 4 cut(s) 352, 861, 971, 1089
TseFI GTSAC 1 cut(s) 50
TseI GCWGC 4 cut(s) 269, 272, 295, 419
Tsp45I GTSAC 1 cut(s) 50
TspDTI ATGAA 1 cut(s) 538
TspGWI ACGGA 1 cut(s) 273
TspRI CASTG 4 cut(s) 352, 861, 971, 1089
Tth111I GACNNNGTC 1 cut(s) 332
VpaK11BI GGWCC 1 cut(s) 757
XceI RCATGY 1 cut(s) 639
XhoI CTCGAG 3 cut(s) 10, 132, 299
XspI CTAG 3 cut(s) 311, 372, 447
ZrmI AGTACT 1 cut(s) 816
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.