Rorug05G0130500

UDP-Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
11608714 .. 11610490
1777 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0130500.1

Sequence Viewer

Length: 1611 bp
ATGAAGATACCAAGCTCAACACTAGTCTTCACACTCTCAGTCCTTTCCCTTTCAATATCAATCTCATGCGCAACATCAAATCCAATTCTCAATGACTTCTTCCAATGCCTTCCCAAATATTCAAACTCCTCCTACCCAATTTCAGAAGCCATTTTCACCCGAGAAAACACCAATTTTCAATCTGTTCTGTTATCATATATTAGAAACCTCAGACATTGTACACCCACAACTCCAAAACCTTTGGTCATTGTAACAGCCAAACATGAATCCCATGTCCAAGCAACCGTGATGTGTGCAAAACAGCATGGTTTACACATGAGAATCCGAAGTGGTGGCCACGACTACGAGGGCTTATCCTTCATATCATACATTTCAAATACCTCTTATATAGTCCTTGACATGTTTTACCTTCGAGAGATTGATGTTAACATCGCAGATGAAAGTGCTTGGGTTGGATCTGGAGCTATTGTTGGAGAACTATATTATAGCATTGCAGAAAAAAGTAAAGTTCATGCATTTCCTGGGGGAGTTTGCCCAAGTGTTGGTGTCGGTGGCCTTTTTAGTGGTGGTGGGTACGGTCCTACTATGAGAGAATTTGGGCTTACAGTGGACAACATAGTTGATGCTAGACTAGTCAATGTGAATGGTACAATCCTTGATAGAAAATCCATGGGAGAAGACCTATTTTGGGCCATTAGAGGAGGTGGTGGAGCAAGCTTTGGAGTCATTCTTTCATGGAAGATCAAATTGCTTCAAGTTCCACCCGTTGTCACTGTTTTCAGAATTACAAAGACACTGGAGCAAGGCGCTACGGATGTTCTTCACAGGTGGCAATACGTTGCGCCTAACCTACCTAAAGAACTCTTCATTAGAGCAACTTCAAAAGTCCAGAATAGTACTACCGAAGCAGGAAAGAAGACTGTGGAAGTGGTATTCAATGGTCTCTATCTAGGACAACGGGAAAACCTTCTTCCTTTGGTAAGTGACAGTTTCCCTGAATTGGGTTTGGAGCAAAAAGATTGCTTCGAAATGAGTTGGATTGAATCCACCTTATTCTTTTCCGAATACGCATTTGGAACTCCCATAAAGGCTCTAGTTAAAAGACCAACGGAACCACCTCCATTCTTCTTCAAAGGCAAGTCGGATTATGTAAAACAACCAATTCCGAAAGAGGTCTTGAAGTCGATATTCGAGAAGATGATCAATCGATACGAGTCGACGCACATGCAATGGAACCCATATGGTGGAAGAATGAATGAGATTTCCGAGTCGGAAACTCCATTCCCTCACAGAGCAGGAAACCTATTTATGATTCAGTACTGGACGTATTGGATGGAAAAAGGGATTGAGAGCACCAACAAGTACCTTAAATTGTCGAGAAATTTGTACGGAAGTATGACTCCGTACGTGTCCAAGAGCCCAAGAGAGGTCTTGCATAACTATAGGGATCTTGACATAGGCTCCAATATGCTTAACCAGACCAGCATTGAGCATGCTAGAGTTTATGGAAGAACGTATTTTAAAGGCAATTTTGAAAGATTGGTGCGTGTGAAAAGTGCTGTTGATCCTCAGAATTTTTTCAAGCATGAACAAAGTATCCCACCGCTGTAG

Protein Analysis

536

Amino Acids

60.48

Weight (kDa)

8.84

Isoelectric Point (pI)

32.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAD_binding_4 PF01565 80 - 219 1.3e-23 FAD binding domain
BBE PF08031 480 - 534 1.7e-17 Berberine and berberine like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 70
AccB7I CCANNNNNTGG 2 cut(s) 542, 1244
AccI GTMKAC 1 cut(s) 1217
AciI CCGC 1 cut(s) 1604
AclWI GGATC 3 cut(s) 463, 1455, 1559
AcoI YGGCCR 1 cut(s) 334
AcsI RAATTY 3 cut(s) 593, 1381, 1573
AfaI GTAC 8 cut(s) 220, 575, 649, 898, 1319, 1364, 1388, 1406
AfiI CCNNNNNNNGG 6 cut(s) 542, 688, 1000, 1001, 1244, 1426
AflIII ACRYGT 2 cut(s) 399, 1407
AhlI ACTAGT 2 cut(s) 22, 631
AjnI CCWGG 1 cut(s) 520
AjuI GAANNNNNNNTTGG 2 cut(s) 1056, 1088
AloI GAACNNNNNNTCC 1 cut(s) 1581
AluBI AGCT 3 cut(s) 15, 464, 717
AluI AGCT 3 cut(s) 15, 464, 717
Alw21I GWGCWC 1 cut(s) 1355
Alw26I GTCTC 1 cut(s) 947
AlwI GGATC 3 cut(s) 463, 1455, 1559
Ama87I CYCGRG 1 cut(s) 159
AoxI GGCC 3 cut(s) 334, 553, 690
ApoI RAATTY 3 cut(s) 593, 1381, 1573
Asp700I GAANNNNTTC 2 cut(s) 966, 1577
AspLEI GCGC 3 cut(s) 71, 809, 844
AspS9I GGNCC 2 cut(s) 578, 690
AsuHPI GGTGA 1 cut(s) 148
AsuII TTCGAA 1 cut(s) 1026
AvaI CYCGRG 1 cut(s) 159
AvaII GGWCC 1 cut(s) 578
BalI TGGCCA 1 cut(s) 336
BanII GRGCYC 1 cut(s) 1421
BbsI GAAGAC 3 cut(s) 19, 684, 923
Bbv12I GWGCWC 1 cut(s) 1355
BccI CCATC 1 cut(s) 1327
BcgI CGANNNNNNTGC 2 cut(s) 1207, 1241
BciT130I CCWGG 1 cut(s) 522
BciVI GTATCC 1 cut(s) 1607
BclI TGATCA 1 cut(s) 1200
BcoDI GTCTC 1 cut(s) 947
BcuI ACTAGT 2 cut(s) 22, 631
BfaI CTAG 6 cut(s) 23, 627, 632, 950, 1094, 1497
BfmI CTRYAG 2 cut(s) 1441, 1607
BfoI RGCGCY 1 cut(s) 810
BfuI GTATCC 1 cut(s) 1607
BmcAI AGTACT 2 cut(s) 898, 1319
Bme1390I CCNGG 1 cut(s) 522
Bme18I GGWCC 1 cut(s) 578
BmeT110I CYCGRG 1 cut(s) 159
BmgT120I GGNCC 2 cut(s) 578, 690
BmiI GGNNCC 3 cut(s) 1113, 1235, 1462
BmrFI CCNGG 1 cut(s) 522
BmsI GCATC 1 cut(s) 613
BpiI GAAGAC 3 cut(s) 19, 684, 923
BpmI CTGGAG 2 cut(s) 480, 818
Bpu14I TTCGAA 1 cut(s) 1026
Bsa29I ATCGAT 1 cut(s) 1207
BsaAI YACGTR 1 cut(s) 1408
BsaI GGTCTC 1 cut(s) 947
BsaJI CCNNGG 2 cut(s) 521, 669
BsaXI ACNNNNNCTCC 4 cut(s) 453, 483, 1445, 1475
Bsc4I CCNNNNNNNGG 6 cut(s) 542, 688, 1000, 1001, 1244, 1426
Bse1I ACTGG 2 cut(s) 801, 1325
Bse3DI GCAATG 2 cut(s) 489, 1235
BseBI CCWGG 1 cut(s) 522
BseCI ATCGAT 1 cut(s) 1207
BseDI CCNNGG 2 cut(s) 521, 669
BseGI GGATG 2 cut(s) 820, 1338
BseLI CCNNNNNNNGG 6 cut(s) 542, 688, 1000, 1001, 1244, 1426
BseMI GCAATG 2 cut(s) 489, 1235
BseMII CTCAG 3 cut(s) 51, 223, 1583
BseNI ACTGG 2 cut(s) 801, 1325
BseRI GAGGAG 2 cut(s) 118, 714
BshFI GGCC 3 cut(s) 336, 555, 692
BshVI ATCGAT 1 cut(s) 1207
BsiHKAI GWGCWC 1 cut(s) 1355
BsiHKCI CYCGRG 1 cut(s) 159
BsiWI CGTACG 1 cut(s) 1404
BslI CCNNNNNNNGG 6 cut(s) 542, 688, 1000, 1001, 1244, 1426
BsmAI GTCTC 1 cut(s) 947
BsnI GGCC 3 cut(s) 336, 555, 692
Bso31I GGTCTC 1 cut(s) 947
BsoBI CYCGRG 1 cut(s) 159
Bsp119I TTCGAA 1 cut(s) 1026
Bsp1286I GDGCHC 2 cut(s) 1355, 1421
Bsp1407I TGTACA 1 cut(s) 218
Bsp143I GATC 5 cut(s) 455, 741, 1200, 1447, 1564
Bsp19I CCATGG 1 cut(s) 669
BspACI CCGC 1 cut(s) 1604
BspANI GGCC 3 cut(s) 336, 555, 692
BspCNI CTCAG 3 cut(s) 50, 222, 1582
BspDI ATCGAT 1 cut(s) 1207
BspLI GGNNCC 3 cut(s) 1113, 1235, 1462
BspPI GGATC 3 cut(s) 463, 1455, 1559
BspT104I TTCGAA 1 cut(s) 1026
BspTNI GGTCTC 1 cut(s) 947
BsrDI GCAATG 2 cut(s) 489, 1235
BsrGI TGTACA 1 cut(s) 218
BsrI ACTGG 2 cut(s) 801, 1325
BssECI CCNNGG 2 cut(s) 521, 669
BssMI GATC 5 cut(s) 455, 741, 1200, 1447, 1564
BssT1I CCWWGG 1 cut(s) 669
Bst2UI CCWGG 1 cut(s) 522
Bst4CI ACNGT 6 cut(s) 286, 578, 607, 775, 922, 989
Bst6I CTCTTC 1 cut(s) 869
BstAUI TGTACA 1 cut(s) 218
BstBAI YACGTR 1 cut(s) 1408
BstBI TTCGAA 1 cut(s) 1026
BstC8I GCNNGC 2 cut(s) 715, 1494
BstDEI CTNAG 3 cut(s) 37, 209, 1569
BstDSI CCRYGG 1 cut(s) 669
BstF5I GGATG 2 cut(s) 820, 1338
BstH2I RGCGCY 1 cut(s) 810
BstHHI GCGC 3 cut(s) 71, 809, 844
BstKTI GATC 5 cut(s) 458, 744, 1203, 1450, 1567
BstMAI GTCTC 1 cut(s) 947
BstMBI GATC 5 cut(s) 455, 741, 1200, 1447, 1564
BstNI CCWGG 1 cut(s) 522
BstNSI RCATGY 3 cut(s) 403, 1228, 1496
BstSCI CCNGG 1 cut(s) 520
BstSFI CTRYAG 2 cut(s) 1441, 1607
BstV2I GAAGAC 3 cut(s) 19, 684, 923
BstX2I RGATCY 2 cut(s) 455, 1447
BstYI RGATCY 2 cut(s) 455, 1447
Bsu15I ATCGAT 1 cut(s) 1207
BsuI GTATCC 1 cut(s) 1607
BsuRI GGCC 3 cut(s) 336, 555, 692
BsuTUI ATCGAT 1 cut(s) 1207
BtgI CCRYGG 1 cut(s) 669
BtgZI GCGATG 1 cut(s) 415
BtsCI GGATG 2 cut(s) 820, 1338
BtsIMutI CAGTG 3 cut(s) 612, 771, 794
Cac8I GCNNGC 2 cut(s) 715, 1494
CfoI GCGC 3 cut(s) 71, 809, 844
Cfr13I GGNCC 2 cut(s) 578, 690
ClaI ATCGAT 1 cut(s) 1207
CseI GACGC 1 cut(s) 1228
Csp6I GTAC 8 cut(s) 219, 574, 648, 897, 1318, 1363, 1387, 1405
CviQI GTAC 8 cut(s) 219, 574, 648, 897, 1318, 1363, 1387, 1405
DdeI CTNAG 3 cut(s) 37, 209, 1569
DpnI GATC 5 cut(s) 457, 743, 1202, 1449, 1566
DpnII GATC 5 cut(s) 455, 741, 1200, 1447, 1564
DraI TTTAAA 1 cut(s) 1522
EaeI YGGCCR 1 cut(s) 334
Eam1104I CTCTTC 1 cut(s) 869
EarI CTCTTC 1 cut(s) 869
Eco130I CCWWGG 1 cut(s) 669
Eco24I GRGCYC 1 cut(s) 1421
Eco31I GGTCTC 1 cut(s) 947
Eco47I GGWCC 1 cut(s) 578
Eco88I CYCGRG 1 cut(s) 159
EcoRII CCWGG 1 cut(s) 520
EcoT14I CCWWGG 1 cut(s) 669
EcoT22I ATGCAT 1 cut(s) 517
EcoT38I GRGCYC 1 cut(s) 1421
ErhI CCWWGG 1 cut(s) 669
FauNDI CATATG 1 cut(s) 1240
FbaI TGATCA 1 cut(s) 1200
FblI GTMKAC 1 cut(s) 1217
FokI GGATG 2 cut(s) 827, 1345
FriOI GRGCYC 1 cut(s) 1421
FspBI CTAG 6 cut(s) 23, 627, 632, 950, 1094, 1497
FspI TGCGCA 1 cut(s) 70
GlaI GCGC 3 cut(s) 70, 808, 843
GsuI CTGGAG 2 cut(s) 480, 818
HaeII RGCGCY 1 cut(s) 810
HaeIII GGCC 3 cut(s) 336, 555, 692
HgaI GACGC 1 cut(s) 1228
HhaI GCGC 3 cut(s) 71, 809, 844
Hin6I GCGC 3 cut(s) 69, 807, 842
HinP1I GCGC 3 cut(s) 69, 807, 842
HincII GTYRAC 2 cut(s) 427, 1218
HindII GTYRAC 2 cut(s) 427, 1218
HindIII AAGCTT 1 cut(s) 715
HinfI GANTC 8 cut(s) 266, 321, 723, 1043, 1214, 1268, 1312, 1399
HpaI GTTAAC 1 cut(s) 427
HphI GGTGA 1 cut(s) 148
Hpy166II GTNNAC 5 cut(s) 221, 311, 427, 610, 1218
Hpy188III TCNNGA 7 cut(s) 413, 459, 889, 1177, 1192, 1377, 1451
Hpy8I GTNNAC 5 cut(s) 221, 311, 427, 610, 1218
Hpy99I CGWCG 1 cut(s) 1222
HpyAV CCTTC 4 cut(s) 119, 367, 419, 977
HpyCH4III ACNGT 6 cut(s) 286, 578, 607, 775, 922, 989
HpyCH4IV ACGT 4 cut(s) 837, 1325, 1407, 1514
HpyCH4V TGCA 5 cut(s) 296, 494, 515, 1228, 1435
HpyF3I CTNAG 3 cut(s) 37, 209, 1569
HpySE526I ACGT 4 cut(s) 837, 1325, 1407, 1514
HspAI GCGC 3 cut(s) 69, 807, 842
Ksp22I TGATCA 1 cut(s) 1200
KspAI GTTAAC 1 cut(s) 427
Kzo9I GATC 5 cut(s) 455, 741, 1200, 1447, 1564
LmnI GCTCC 5 cut(s) 461, 710, 799, 1009, 1466
LweI GCATC 1 cut(s) 613
MaeI CTAG 6 cut(s) 23, 627, 632, 950, 1094, 1497
MaeII ACGT 4 cut(s) 837, 1325, 1407, 1514
MaeIII GTNAC 3 cut(s) 250, 769, 983
MalI GATC 5 cut(s) 457, 743, 1202, 1449, 1566
MboI GATC 5 cut(s) 455, 741, 1200, 1447, 1564
MflI RGATCY 2 cut(s) 455, 1447
MhlI GDGCHC 2 cut(s) 1355, 1421
MlsI TGGCCA 1 cut(s) 336
MluNI TGGCCA 1 cut(s) 336
MlyI GAGTC 4 cut(s) 732, 1223, 1277, 1393
MmeI TCCRAC 5 cut(s) 433, 451, 1016, 1122, 1251
Mox20I TGGCCA 1 cut(s) 336
Mph1103I ATGCAT 1 cut(s) 517
MroXI GAANNNNTTC 2 cut(s) 966, 1577
MscI TGGCCA 1 cut(s) 336
MseI TTAA 5 cut(s) 426, 1098, 1368, 1473, 1521
Msp20I TGGCCA 1 cut(s) 336
MspA1I CMGCKG 1 cut(s) 1606
MspR9I CCNGG 1 cut(s) 522
MvaI CCWGG 1 cut(s) 522
NcoI CCATGG 1 cut(s) 669
NdeI CATATG 1 cut(s) 1240
NdeII GATC 5 cut(s) 455, 741, 1200, 1447, 1564
NlaIV GGNNCC 3 cut(s) 1113, 1235, 1462
NmuCI GTSAC 2 cut(s) 769, 983
NsbI TGCGCA 1 cut(s) 70
NsiI ATGCAT 1 cut(s) 517
NspI RCATGY 3 cut(s) 403, 1228, 1496
NspV TTCGAA 1 cut(s) 1026
PaeI GCATGC 1 cut(s) 1496
PciI ACATGT 1 cut(s) 399
PdmI GAANNNNTTC 2 cut(s) 966, 1577
PfeI GAWTC 4 cut(s) 266, 321, 1043, 1312
Pfl23II CGTACG 1 cut(s) 1404
PflMI CCANNNNNTGG 2 cut(s) 542, 1244
PleI GAGTC 4 cut(s) 731, 1222, 1276, 1393
PpsI GAGTC 4 cut(s) 731, 1222, 1276, 1393
Ppu21I YACGTR 1 cut(s) 1408
PscI ACATGT 1 cut(s) 399
Psp6I CCWGG 1 cut(s) 520
PspGI CCWGG 1 cut(s) 520
PspLI CGTACG 1 cut(s) 1404
PspN4I GGNNCC 3 cut(s) 1113, 1235, 1462
PspPI GGNCC 2 cut(s) 578, 690
PsuI RGATCY 2 cut(s) 455, 1447
RsaI GTAC 8 cut(s) 220, 575, 649, 898, 1319, 1364, 1388, 1406
RsaNI GTAC 8 cut(s) 219, 574, 648, 897, 1318, 1363, 1387, 1405
SalI GTCGAC 1 cut(s) 1216
SaqAI TTAA 5 cut(s) 426, 1098, 1368, 1473, 1521
Sau3AI GATC 5 cut(s) 455, 741, 1200, 1447, 1564
Sau96I GGNCC 2 cut(s) 578, 690
ScaI AGTACT 2 cut(s) 898, 1319
SchI GAGTC 4 cut(s) 732, 1223, 1277, 1393
ScrFI CCNGG 1 cut(s) 522
SduI GDGCHC 2 cut(s) 1355, 1421
SfaNI GCATC 1 cut(s) 613
SfcI CTRYAG 2 cut(s) 1441, 1607
SfuI TTCGAA 1 cut(s) 1026
SinI GGWCC 1 cut(s) 578
SpeI ACTAGT 2 cut(s) 22, 631
SphI GCATGC 1 cut(s) 1496
SsiI CCGC 1 cut(s) 1604
SspI AATATT 1 cut(s) 119
SspMI CTAG 6 cut(s) 23, 627, 632, 950, 1094, 1497
StyD4I CCNGG 1 cut(s) 520
StyI CCWWGG 1 cut(s) 669
TaaI ACNGT 6 cut(s) 286, 578, 607, 775, 922, 989
TaiI ACGT 4 cut(s) 840, 1328, 1410, 1517
TaqI TCGA 7 cut(s) 412, 1026, 1184, 1191, 1207, 1217, 1376
TatI WGTACW 3 cut(s) 218, 896, 1317
TfiI GAWTC 4 cut(s) 266, 321, 1043, 1312
Tru1I TTAA 5 cut(s) 426, 1098, 1368, 1473, 1521
Tru9I TTAA 5 cut(s) 426, 1098, 1368, 1473, 1521
TscAI CASTG 3 cut(s) 612, 778, 801
TseFI GTSAC 2 cut(s) 769, 983
Tsp45I GTSAC 2 cut(s) 769, 983
TspDTI ATGAA 9 cut(s) 17, 279, 349, 453, 500, 723, 856, 1268, 1602
TspGWI ACGGA 4 cut(s) 827, 1124, 1392, 1404
TspRI CASTG 3 cut(s) 612, 778, 801
Van91I CCANNNNNTGG 2 cut(s) 542, 1244
VpaK11BI GGWCC 1 cut(s) 578
XapI RAATTY 3 cut(s) 593, 1381, 1573
XceI RCATGY 3 cut(s) 403, 1228, 1496
XmiI GTMKAC 1 cut(s) 1217
XmnI GAANNNNTTC 2 cut(s) 966, 1577
XspI CTAG 6 cut(s) 23, 627, 632, 950, 1094, 1497
ZrmI AGTACT 2 cut(s) 898, 1319
Zsp2I ATGCAT 1 cut(s) 517
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.