Sucrose transport protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0039551 |
| rosa_roxburghii | Rroxscaffold_1G00055360 Rroxscaffold_4G00314050 |
| rosa_samantha | Rh6DG221700 |
| rosa_wichuraiana | Rw2G046150 Rw3G016030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 225 |
| AclWI | GGATC | 2 cut(s) | 75, 298 |
| AcyI | GRCGYC | 1 cut(s) | 271 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 227 |
| AgsI | TTSAA | 3 cut(s) | 87, 218, 256 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 174 |
| AluBI | AGCT | 3 cut(s) | 42, 73, 184 |
| AluI | AGCT | 3 cut(s) | 42, 73, 184 |
| Alw26I | GTCTC | 2 cut(s) | 19, 161 |
| AlwI | GGATC | 2 cut(s) | 75, 298 |
| AoxI | GGCC | 1 cut(s) | 89 |
| ApeKI | GCWGC | 1 cut(s) | 39 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 213 |
| BbsI | GAAGAC | 1 cut(s) | 274 |
| BbvI | GCAGC | 1 cut(s) | 51 |
| BcoDI | GTCTC | 2 cut(s) | 19, 161 |
| BfaI | CTAG | 2 cut(s) | 185, 334 |
| BfmI | CTRYAG | 2 cut(s) | 9, 37 |
| BisI | GCNGC | 1 cut(s) | 40 |
| BlsI | GCNGC | 1 cut(s) | 41 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 174 |
| BpiI | GAAGAC | 1 cut(s) | 274 |
| BsaHI | GRCGYC | 1 cut(s) | 271 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 227 |
| Bse3DI | GCAATG | 2 cut(s) | 106, 323 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 227 |
| BseMI | GCAATG | 2 cut(s) | 106, 323 |
| BseMII | CTCAG | 1 cut(s) | 156 |
| BseXI | GCAGC | 1 cut(s) | 51 |
| BshFI | GGCC | 1 cut(s) | 91 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 227 |
| BsmAI | GTCTC | 2 cut(s) | 19, 161 |
| BsnI | GGCC | 1 cut(s) | 91 |
| Bsp143I | GATC | 2 cut(s) | 67, 290 |
| BspACI | CCGC | 1 cut(s) | 225 |
| BspANI | GGCC | 1 cut(s) | 91 |
| BspCNI | CTCAG | 1 cut(s) | 157 |
| BspMAI | CTGCAG | 1 cut(s) | 41 |
| BspPI | GGATC | 2 cut(s) | 75, 298 |
| BsrDI | GCAATG | 2 cut(s) | 106, 323 |
| BssMI | GATC | 2 cut(s) | 67, 290 |
| BssNI | GRCGYC | 1 cut(s) | 271 |
| Bst6I | CTCTTC | 1 cut(s) | 22 |
| BstACI | GRCGYC | 1 cut(s) | 271 |
| BstDEI | CTNAG | 1 cut(s) | 165 |
| BstKTI | GATC | 2 cut(s) | 70, 293 |
| BstMAI | GTCTC | 2 cut(s) | 19, 161 |
| BstMBI | GATC | 2 cut(s) | 67, 290 |
| BstSFI | CTRYAG | 2 cut(s) | 9, 37 |
| BstV1I | GCAGC | 1 cut(s) | 51 |
| BstV2I | GAAGAC | 1 cut(s) | 274 |
| BstX2I | RGATCY | 1 cut(s) | 290 |
| BstYI | RGATCY | 1 cut(s) | 290 |
| BsuRI | GGCC | 1 cut(s) | 91 |
| CseI | GACGC | 1 cut(s) | 279 |
| CviJI | RGCY | 5 cut(s) | 42, 73, 91, 155, 184 |
| CviKI_1 | RGCY | 5 cut(s) | 42, 73, 91, 155, 184 |
| DdeI | CTNAG | 1 cut(s) | 165 |
| DpnI | GATC | 2 cut(s) | 69, 292 |
| DpnII | GATC | 2 cut(s) | 67, 290 |
| DriI | GACNNNNNGTC | 1 cut(s) | 174 |
| Eam1104I | CTCTTC | 1 cut(s) | 22 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 174 |
| EarI | CTCTTC | 1 cut(s) | 22 |
| Eco147I | AGGCCT | 1 cut(s) | 91 |
| FaiI | YATR | 3 cut(s) | 80, 281, 314 |
| Fnu4HI | GCNGC | 1 cut(s) | 40 |
| Fsp4HI | GCNGC | 1 cut(s) | 40 |
| FspBI | CTAG | 2 cut(s) | 185, 334 |
| GluI | GCNGC | 1 cut(s) | 40 |
| HaeIII | GGCC | 1 cut(s) | 91 |
| HgaI | GACGC | 1 cut(s) | 279 |
| Hin1I | GRCGYC | 1 cut(s) | 271 |
| HinfI | GANTC | 1 cut(s) | 175 |
| Hpy188III | TCNNGA | 1 cut(s) | 164 |
| HpyAV | CCTTC | 1 cut(s) | 286 |
| HpyCH4IV | ACGT | 1 cut(s) | 105 |
| HpyCH4V | TGCA | 5 cut(s) | 39, 63, 139, 287, 328 |
| HpyF3I | CTNAG | 1 cut(s) | 165 |
| HpySE526I | ACGT | 1 cut(s) | 105 |
| Hsp92I | GRCGYC | 1 cut(s) | 271 |
| Kzo9I | GATC | 2 cut(s) | 67, 290 |
| LpnPI | CCDG | 6 cut(s) | 49, 49, 141, 177, 235, 273 |
| Lsp1109I | GCAGC | 1 cut(s) | 51 |
| MaeI | CTAG | 2 cut(s) | 185, 334 |
| MaeII | ACGT | 1 cut(s) | 105 |
| MaeIII | GTNAC | 2 cut(s) | 191, 239 |
| MalI | GATC | 2 cut(s) | 69, 292 |
| MboI | GATC | 2 cut(s) | 67, 290 |
| MboII | GAAGA | 4 cut(s) | 9, 124, 276, 279 |
| MflI | RGATCY | 1 cut(s) | 290 |
| MluCI | AATT | 3 cut(s) | 58, 108, 329 |
| MlyI | GAGTC | 1 cut(s) | 184 |
| MnlI | CCTC | 1 cut(s) | 144 |
| MroXI | GAANNNNTTC | 1 cut(s) | 213 |
| MseI | TTAA | 1 cut(s) | 203 |
| MspA1I | CMGCKG | 1 cut(s) | 73 |
| NdeII | GATC | 2 cut(s) | 67, 290 |
| NmuCI | GTSAC | 2 cut(s) | 191, 239 |
| PceI | AGGCCT | 1 cut(s) | 91 |
| PdmI | GAANNNNTTC | 1 cut(s) | 213 |
| PkrI | GCNGC | 1 cut(s) | 41 |
| PleI | GAGTC | 1 cut(s) | 183 |
| PpsI | GAGTC | 1 cut(s) | 183 |
| PstI | CTGCAG | 1 cut(s) | 41 |
| PsuI | RGATCY | 1 cut(s) | 290 |
| PvuII | CAGCTG | 1 cut(s) | 73 |
| SaqAI | TTAA | 1 cut(s) | 203 |
| SatI | GCNGC | 1 cut(s) | 40 |
| Sau3AI | GATC | 2 cut(s) | 67, 290 |
| SchI | GAGTC | 1 cut(s) | 184 |
| SetI | ASST | 5 cut(s) | 44, 75, 108, 186, 216 |
| SfcI | CTRYAG | 2 cut(s) | 9, 37 |
| Sse9I | AATT | 3 cut(s) | 58, 108, 329 |
| SseBI | AGGCCT | 1 cut(s) | 91 |
| SsiI | CCGC | 1 cut(s) | 225 |
| SspMI | CTAG | 2 cut(s) | 185, 334 |
| StuI | AGGCCT | 1 cut(s) | 91 |
| TaiI | ACGT | 1 cut(s) | 108 |
| TasI | AATT | 3 cut(s) | 58, 108, 329 |
| Tru1I | TTAA | 1 cut(s) | 203 |
| Tru9I | TTAA | 1 cut(s) | 203 |
| TseFI | GTSAC | 2 cut(s) | 191, 239 |
| TseI | GCWGC | 1 cut(s) | 39 |
| Tsp45I | GTSAC | 2 cut(s) | 191, 239 |
| TspDTI | ATGAA | 2 cut(s) | 17, 268 |
| XmnI | GAANNNNTTC | 1 cut(s) | 213 |
| XspI | CTAG | 2 cut(s) | 185, 334 |