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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0317781 RchiOBHm_Chr1g0339171 RchiOBHm_Chr2g0168941 |
| rosa_roxburghii | Rroxscaffold_1G00061500 |
| rosa_samantha | Rh2AG551600 Rh4DG214700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 281 |
| AciI | CCGC | 2 cut(s) | 288, 318 |
| AfaI | GTAC | 1 cut(s) | 78 |
| AflII | CTTAAG | 1 cut(s) | 137 |
| AflIII | ACRYGT | 1 cut(s) | 38 |
| AgsI | TTSAA | 4 cut(s) | 51, 62, 188, 264 |
| AluBI | AGCT | 2 cut(s) | 128, 136 |
| AluI | AGCT | 2 cut(s) | 128, 136 |
| Alw21I | GWGCWC | 1 cut(s) | 175 |
| Alw26I | GTCTC | 1 cut(s) | 247 |
| Ama87I | CYCGRG | 1 cut(s) | 129 |
| AoxI | GGCC | 1 cut(s) | 192 |
| AvaI | CYCGRG | 1 cut(s) | 129 |
| BbsI | GAAGAC | 1 cut(s) | 11 |
| Bbv12I | GWGCWC | 1 cut(s) | 175 |
| BccI | CCATC | 1 cut(s) | 322 |
| BcoDI | GTCTC | 1 cut(s) | 247 |
| BfaI | CTAG | 1 cut(s) | 327 |
| BfmI | CTRYAG | 1 cut(s) | 66 |
| BfrI | CTTAAG | 1 cut(s) | 137 |
| BmeT110I | CYCGRG | 1 cut(s) | 129 |
| BpiI | GAAGAC | 1 cut(s) | 11 |
| BsaI | GGTCTC | 1 cut(s) | 247 |
| BsaJI | CCNNGG | 1 cut(s) | 21 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 105, 135 |
| Bse1I | ACTGG | 1 cut(s) | 249 |
| Bse3DI | GCAATG | 1 cut(s) | 90 |
| BseDI | CCNNGG | 1 cut(s) | 21 |
| BseGI | GGATG | 1 cut(s) | 314 |
| BseMI | GCAATG | 1 cut(s) | 90 |
| BseNI | ACTGG | 1 cut(s) | 249 |
| Bsh1236I | CGCG | 1 cut(s) | 281 |
| BshFI | GGCC | 1 cut(s) | 194 |
| BsiHKAI | GWGCWC | 1 cut(s) | 175 |
| BsiHKCI | CYCGRG | 1 cut(s) | 129 |
| BsmAI | GTCTC | 1 cut(s) | 247 |
| BsnI | GGCC | 1 cut(s) | 194 |
| Bso31I | GGTCTC | 1 cut(s) | 247 |
| BsoBI | CYCGRG | 1 cut(s) | 129 |
| Bsp1286I | GDGCHC | 1 cut(s) | 175 |
| Bsp143I | GATC | 1 cut(s) | 266 |
| BspACI | CCGC | 2 cut(s) | 288, 318 |
| BspANI | GGCC | 1 cut(s) | 194 |
| BspFNI | CGCG | 1 cut(s) | 281 |
| BspTI | CTTAAG | 1 cut(s) | 137 |
| BspTNI | GGTCTC | 1 cut(s) | 247 |
| BsrDI | GCAATG | 1 cut(s) | 90 |
| BsrI | ACTGG | 1 cut(s) | 249 |
| BssECI | CCNNGG | 1 cut(s) | 21 |
| BssMI | GATC | 1 cut(s) | 266 |
| Bst4CI | ACNGT | 1 cut(s) | 67 |
| Bst6I | CTCTTC | 1 cut(s) | 97 |
| BstAFI | CTTAAG | 1 cut(s) | 137 |
| BstF5I | GGATG | 1 cut(s) | 314 |
| BstFNI | CGCG | 1 cut(s) | 281 |
| BstKTI | GATC | 1 cut(s) | 269 |
| BstMAI | GTCTC | 1 cut(s) | 247 |
| BstMBI | GATC | 1 cut(s) | 266 |
| BstNSI | RCATGY | 1 cut(s) | 42 |
| BstSFI | CTRYAG | 1 cut(s) | 66 |
| BstUI | CGCG | 1 cut(s) | 281 |
| BstV2I | GAAGAC | 1 cut(s) | 11 |
| BsuRI | GGCC | 1 cut(s) | 194 |
| BtsCI | GGATG | 1 cut(s) | 314 |
| BtsIMutI | CAGTG | 1 cut(s) | 242 |
| Csp6I | GTAC | 1 cut(s) | 77 |
| CviAII | CATG | 1 cut(s) | 39 |
| CviJI | RGCY | 6 cut(s) | 128, 136, 160, 194, 304, 326 |
| CviKI_1 | RGCY | 6 cut(s) | 128, 136, 160, 194, 304, 326 |
| CviQI | GTAC | 1 cut(s) | 77 |
| DpnI | GATC | 1 cut(s) | 268 |
| DpnII | GATC | 1 cut(s) | 266 |
| Eam1104I | CTCTTC | 1 cut(s) | 97 |
| EarI | CTCTTC | 1 cut(s) | 97 |
| Eco31I | GGTCTC | 1 cut(s) | 247 |
| Eco88I | CYCGRG | 1 cut(s) | 129 |
| FaeI | CATG | 1 cut(s) | 42 |
| FaiI | YATR | 8 cut(s) | 36, 40, 44, 85, 87, 179, 181, 198 |
| FatI | CATG | 1 cut(s) | 38 |
| FauNDI | CATATG | 1 cut(s) | 85 |
| FokI | GGATG | 1 cut(s) | 301 |
| FspBI | CTAG | 1 cut(s) | 327 |
| HaeIII | GGCC | 1 cut(s) | 194 |
| Hin1II | CATG | 1 cut(s) | 42 |
| HinfI | GANTC | 1 cut(s) | 235 |
| Hpy188I | TCNGA | 2 cut(s) | 22, 271 |
| Hpy188III | TCNNGA | 3 cut(s) | 131, 166, 264 |
| HpyAV | CCTTC | 1 cut(s) | 212 |
| HpyCH4III | ACNGT | 1 cut(s) | 67 |
| HpyCH4V | TGCA | 1 cut(s) | 242 |
| Hsp92II | CATG | 1 cut(s) | 42 |
| Kzo9I | GATC | 1 cut(s) | 266 |
| LmnI | GCTCC | 1 cut(s) | 113 |
| LpnPI | CCDG | 3 cut(s) | 81, 146, 230 |
| MaeI | CTAG | 1 cut(s) | 327 |
| MaeIII | GTNAC | 1 cut(s) | 30 |
| MalI | GATC | 1 cut(s) | 268 |
| MboI | GATC | 1 cut(s) | 266 |
| MboII | GAAGA | 2 cut(s) | 16, 114 |
| MhlI | GDGCHC | 1 cut(s) | 175 |
| MluCI | AATT | 2 cut(s) | 188, 259 |
| MnlI | CCTC | 1 cut(s) | 16 |
| MseI | TTAA | 2 cut(s) | 138, 209 |
| MslI | CAYNNNNRTG | 1 cut(s) | 178 |
| MspCI | CTTAAG | 1 cut(s) | 137 |
| MvnI | CGCG | 1 cut(s) | 281 |
| NdeI | CATATG | 1 cut(s) | 85 |
| NdeII | GATC | 1 cut(s) | 266 |
| NlaIII | CATG | 1 cut(s) | 42 |
| NspI | RCATGY | 1 cut(s) | 42 |
| PaeR7I | CTCGAG | 1 cut(s) | 129 |
| PciI | ACATGT | 1 cut(s) | 38 |
| PfeI | GAWTC | 1 cut(s) | 235 |
| PscI | ACATGT | 1 cut(s) | 38 |
| RsaI | GTAC | 1 cut(s) | 78 |
| RsaNI | GTAC | 1 cut(s) | 77 |
| RseI | CAYNNNNRTG | 1 cut(s) | 178 |
| SaqAI | TTAA | 2 cut(s) | 138, 209 |
| Sau3AI | GATC | 1 cut(s) | 266 |
| SduI | GDGCHC | 1 cut(s) | 175 |
| SetI | ASST | 5 cut(s) | 27, 56, 73, 130, 138 |
| SfcI | CTRYAG | 1 cut(s) | 66 |
| Sfr274I | CTCGAG | 1 cut(s) | 129 |
| SlaI | CTCGAG | 1 cut(s) | 129 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 178 |
| SmlI | CTYRAG | 2 cut(s) | 129, 137 |
| SmoI | CTYRAG | 2 cut(s) | 129, 137 |
| Sse9I | AATT | 2 cut(s) | 188, 259 |
| SsiI | CCGC | 2 cut(s) | 288, 318 |
| SspMI | CTAG | 1 cut(s) | 327 |
| TaaI | ACNGT | 1 cut(s) | 67 |
| TaqI | TCGA | 2 cut(s) | 130, 310 |
| TasI | AATT | 2 cut(s) | 188, 259 |
| TfiI | GAWTC | 1 cut(s) | 235 |
| Tru1I | TTAA | 2 cut(s) | 138, 209 |
| Tru9I | TTAA | 2 cut(s) | 138, 209 |
| TscAI | CASTG | 1 cut(s) | 249 |
| TspDTI | ATGAA | 4 cut(s) | 17, 72, 165, 248 |
| TspRI | CASTG | 1 cut(s) | 249 |
| Vha464I | CTTAAG | 1 cut(s) | 137 |
| XceI | RCATGY | 1 cut(s) | 42 |
| XhoI | CTCGAG | 1 cut(s) | 129 |
| XspI | CTAG | 1 cut(s) | 327 |