Rroxscaffold_2G00102010

Belongs to the GMC oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0011318
Physical Location & Seq
Reverse (-)
23996315 .. 24002371
6057 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00102010.1

Sequence Viewer

Length: 1608 bp
ATGGAAGAGCTCGAGTTTCCTCCTAAAGAAGGTAAGGCGGTTTACAATGAATTCAGATACCCATTTATAAAAAAAGCAAGCTCTTTCCCATCTGTATCATCATCTTTATCAAGCGGCCACAGCAATGGCTATGACTACATAATTGTGGGAGGAGGCACAGCTGGGTGTCCTTTGGCTGCAACCCTCTCTCAGAATTTCAGTGTTTTGGTGCTCGAAAGAGGGGGAGCTAGGGTTTTGGGTGGCGGCAGTGTCATCAATGCTGGATTCTATACCAGAGCAAGCCCAAGGTTTATAAAGAGAGTGGGATGGGATGCCAAGCTAGTAAATGAGTCATATCCCTGGATTGAGAAGCAAATTGTTCACGAGCCACTGCTTGAACCATATCAGATGGCATTCAGGGACAGTCTTTTGGCTGCTGGGATCTCACCTTTTAATGGATTCACTTATGATCACCTTTATGGAACCAAAGTTGGTGGAACCATTTTCGATAGATTTGGTCGTCGTCACTCTTCTGCTGAATTGCTGTCTTCTGGGAATCCTCAGAAGCTCACAGTCTTGATTTATGCAACAGTTCAAAAGATTGTTTTTGACACATCAGGGAAGAAACCAAAGGCAGTGGGAGTTACCTTCAAAGATGAAAATGGGAACCAACATCAAGCATTTCTTGTTGATAAGCCGCAGAGTGAAGTACTATTGTCTAGTGGAGCAATTGGAAGCCCTCAAATGTTATTGCTAAGCGGTATTGGACCCAAAGCTGACCTAGAGAAGTTGAACATTCCAGTGGTGCTCAATAATGAGTTTGTTGGAAAAGGCATGGCTGATAATCCAATGAATGCAATCTTTGTCCCTAGCAGTAAAGCAGAAAATCAGACGCTAATCGAAACTGTAGGGATCACCAAAATGGGTGTGTACATTGAAGCTAGCAGTGGATTTGGGCAGTCCCAGGATAGCATTGAATGCAACCACGGAATCCTGTCAGCTGAGATTGGACAGCTATCTACTATTCCTCCAAAGCAAAGAACCCCAGAAGCCATTCAAGCTTTCATCAAACACAAGAGAAACTTGCCCCATGAGGCATTTAAAGGAGGCTTTATTCTGGAAAAAATTGCAAGTCCAATTTCCAAAGGAGACCTTAGCCTGATCAACACCAATGTCGATGATAACCCCTCTGTCAGCTTCAACTACTTCAGCCACCCCTATGATCTTAAGCGCTGTGTTGATGGAATTCGAATAGCCACAAAGGTTGTGCAATCGGAGCATTTCACAAACTACACAAGAGTTGACAAGCAAACTGTGGAAAAGATACTTAACATGAGTGTGAAGGCTAATGTTAACCTCATACCTAAGAATATCAATGACACAAAGTCATTGGAGCAGTTCTGCAAAGACACTGTCATCACCATTTGGCATTACCATGGTGGGTGTCATGTGGGCACTGTGGTTAGCCCTGACAACAAAGTTCTTGGTGTCAACAGGGTCAGGGTTGTGGATGGCTCGACGTTTTCTGAATCCCCCGGAACTAATCCTCAGGCCACTGTCATGATGATGGGCAGGTACATGGGACTGAAGATCTTGAGAGACAGATTGGGAAGAGCAGCTGGTATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00073 map00073
Pfam Domains
Protein Families
GMC_oxred_C GMC_oxred_N

Protein Analysis

535

Amino Acids

58.38

Weight (kDa)

8.98

Isoelectric Point (pI)

39.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GMC_oxred_N PF00732 44 - 275 1.2e-18 GMC oxidoreductase
GMC_oxred_C PF05199 372 - 517 4e-25 GMC oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011318)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G72970 AT1G72970
fragaria_vesca FvH4_6g33360 FvH4_6g33360 FvH4_6g33360
malus_domestica MD09G1193200.v1.1
prunus_persica Prupe.3G049600_v2.0.a1
pyrus_communis pycom09g10980
rosa_chinensis RchiOBHm_Chr2g0143221
rosa_laevigata RLG00000020016
rosa_multiflora Rmu_sc0003950.1_g000006
rosa_roxburghii Rroxscaffold_2G00102010
rosa_rugosa Rorug02G0379500 Rorug02G0379600 Rorug02G0379700
rosa_samantha Rh2AG432400 Rh2BG441000 Rh2CG418200 Rh2DG451100
rosa_wichuraiana Rw2G035300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 68, 293
Acc36I ACCTGC 1 cut(s) 1542
AciI CCGC 5 cut(s) 38, 114, 243, 677, 738
AclWI GGATC 2 cut(s) 428, 899
AcoI YGGCCR 1 cut(s) 115
AcsI RAATTY 3 cut(s) 50, 193, 1224
AcuI CTGAAG 2 cut(s) 1171, 1586
AfaI GTAC 3 cut(s) 690, 911, 1556
AfeI AGCGCT 1 cut(s) 1211
AfiI CCNNNNNNNGG 2 cut(s) 29, 434
AflII CTTAAG 1 cut(s) 1205
AgsI TTSAA 8 cut(s) 377, 575, 631, 772, 917, 956, 1037, 1180
AhdI GACNNNNNGTC 1 cut(s) 1363
AjnI CCWGG 2 cut(s) 338, 942
Alw21I GWGCWC 3 cut(s) 12, 213, 789
Alw26I GTCTC 2 cut(s) 1122, 1572
AlwI GGATC 2 cut(s) 428, 899
Ama87I CYCGRG 1 cut(s) 11
Aor51HI AGCGCT 1 cut(s) 1211
AoxI GGCC 2 cut(s) 115, 1530
ApeKI GCWGC 3 cut(s) 176, 413, 1595
ApoI RAATTY 3 cut(s) 50, 193, 1224
ArsI GACNNNNNNTTYG 2 cut(s) 1377, 1409
Asp700I GAANNNNTTC 1 cut(s) 1032
AspLEI GCGC 1 cut(s) 1212
AspS9I GGNCC 1 cut(s) 746
AsuC2I CCSGG 1 cut(s) 1515
AsuHPI GGTGA 4 cut(s) 417, 443, 886, 1390
AsuII TTCGAA 1 cut(s) 1228
AsuNHI GCTAGC 1 cut(s) 920
AvaI CYCGRG 1 cut(s) 11
AvaII GGWCC 1 cut(s) 746
AxyI CCTNAGG 1 cut(s) 1527
BaeGI GKGCMC 1 cut(s) 1436
BanII GRGCYC 1 cut(s) 12
BauI CACGAG 1 cut(s) 362
BbsI GAAGAC 1 cut(s) 519
Bbv12I GWGCWC 3 cut(s) 12, 213, 789
BbvI GCAGC 2 cut(s) 163, 400
BccI CCATC 6 cut(s) 97, 300, 382, 1214, 1484, 1540
BciT130I CCWGG 2 cut(s) 340, 944
BclI TGATCA 2 cut(s) 448, 1140
BcnI CCSGG 1 cut(s) 1515
BcoDI GTCTC 2 cut(s) 1122, 1572
BfaI CTAG 6 cut(s) 228, 320, 699, 761, 849, 921
BfmI CTRYAG 1 cut(s) 885
BfoI RGCGCY 1 cut(s) 1213
BfrI CTTAAG 1 cut(s) 1205
BfuAI ACCTGC 1 cut(s) 1542
BglII AGATCT 1 cut(s) 1569
BisI GCNGC 6 cut(s) 115, 177, 244, 414, 677, 1596
BlpI GCTNAGC 1 cut(s) 734
BlsI GCNGC 6 cut(s) 116, 178, 245, 415, 678, 1597
BmcAI AGTACT 1 cut(s) 690
Bme1390I CCNGG 3 cut(s) 340, 944, 1515
Bme18I GGWCC 1 cut(s) 746
BmeRI GACNNNNNGTC 1 cut(s) 1363
BmeT110I CYCGRG 1 cut(s) 11
BmgT120I GGNCC 1 cut(s) 746
BmiI GGNNCC 4 cut(s) 463, 478, 647, 748
BmrFI CCNGG 3 cut(s) 340, 944, 1515
BmsI GCATC 1 cut(s) 301
BmtI GCTAGC 1 cut(s) 924
BpiI GAAGAC 1 cut(s) 519
Bpu10I CCTNAGC 1 cut(s) 1133
Bpu1102I GCTNAGC 1 cut(s) 734
Bpu14I TTCGAA 1 cut(s) 1228
BpuEI CTTGAG 1 cut(s) 1594
BpuMI CCSGG 1 cut(s) 1515
BsaI GGTCTC 1 cut(s) 1122
BsaJI CCNNGG 6 cut(s) 284, 338, 942, 964, 1414, 1513
BsaXI ACNNNNNCTCC 4 cut(s) 216, 246, 991, 1021
Bsc4I CCNNNNNNNGG 2 cut(s) 29, 434
Bse1I ACTGG 1 cut(s) 779
Bse21I CCTNAGG 1 cut(s) 1527
Bse3DI GCAATG 1 cut(s) 130
BseBI CCWGG 2 cut(s) 340, 944
BseDI CCNNGG 6 cut(s) 284, 338, 942, 964, 1414, 1513
BseGI GGATG 3 cut(s) 311, 316, 1495
BseLI CCNNNNNNNGG 2 cut(s) 29, 434
BseMI GCAATG 1 cut(s) 130
BseMII CTCAG 4 cut(s) 203, 554, 972, 1541
BseNI ACTGG 1 cut(s) 779
BseRI GAGGAG 1 cut(s) 165
BseSI GKGCMC 1 cut(s) 1436
BseXI GCAGC 2 cut(s) 163, 400
BseYI CCCAGC 2 cut(s) 161, 416
BshFI GGCC 2 cut(s) 117, 1532
BsiHKAI GWGCWC 3 cut(s) 12, 213, 789
BsiHKCI CYCGRG 1 cut(s) 11
BsiSI CCGG 1 cut(s) 1515
BslFI GGGAC 4 cut(s) 413, 830, 925, 1575
BslI CCNNNNNNNGG 2 cut(s) 29, 434
BsmAI GTCTC 2 cut(s) 1122, 1572
BsmFI GGGAC 4 cut(s) 413, 830, 925, 1575
BsmI GAATGC 3 cut(s) 392, 838, 962
BsnI GGCC 2 cut(s) 117, 1532
Bso31I GGTCTC 1 cut(s) 1122
BsoBI CYCGRG 1 cut(s) 11
Bsp119I TTCGAA 1 cut(s) 1228
Bsp1286I GDGCHC 4 cut(s) 12, 213, 789, 1436
Bsp1407I TGTACA 1 cut(s) 909
Bsp143I GATC 6 cut(s) 420, 448, 891, 1140, 1201, 1569
Bsp1720I GCTNAGC 1 cut(s) 734
Bsp19I CCATGG 1 cut(s) 1414
BspACI CCGC 5 cut(s) 38, 114, 243, 677, 738
BspANI GGCC 2 cut(s) 117, 1532
BspCNI CTCAG 4 cut(s) 202, 553, 973, 1540
BspHI TCATGA 1 cut(s) 1539
BspLI GGNNCC 4 cut(s) 463, 478, 647, 748
BspMI ACCTGC 1 cut(s) 1542
BspOI GCTAGC 1 cut(s) 924
BspPI GGATC 2 cut(s) 428, 899
BspQI GCTCTTC 1 cut(s) 1585
BspT104I TTCGAA 1 cut(s) 1228
BspTI CTTAAG 1 cut(s) 1205
BspTNI GGTCTC 1 cut(s) 1122
BsrDI GCAATG 1 cut(s) 130
BsrGI TGTACA 1 cut(s) 909
BsrI ACTGG 1 cut(s) 779
BssECI CCNNGG 6 cut(s) 284, 338, 942, 964, 1414, 1513
BssMI GATC 6 cut(s) 420, 448, 891, 1140, 1201, 1569
BssSI CACGAG 1 cut(s) 362
BssT1I CCWWGG 2 cut(s) 284, 1414
Bst2BI CACGAG 1 cut(s) 362
Bst2UI CCWGG 2 cut(s) 340, 944
Bst4CI ACNGT 8 cut(s) 404, 553, 571, 886, 1294, 1393, 1438, 1537
Bst6I CTCTTC 2 cut(s) 514, 1585
BstAFI CTTAAG 1 cut(s) 1205
BstAPI GCANNNNNTGC 1 cut(s) 957
BstAUI TGTACA 1 cut(s) 909
BstBI TTCGAA 1 cut(s) 1228
BstC8I GCNNGC 3 cut(s) 79, 280, 922
BstDEI CTNAG 7 cut(s) 189, 540, 734, 981, 1133, 1344, 1527
BstDSI CCRYGG 2 cut(s) 964, 1414
BstENI CCTNNNNNAGG 1 cut(s) 27
BstF5I GGATG 3 cut(s) 311, 316, 1495
BstH2I RGCGCY 1 cut(s) 1213
BstHHI GCGC 1 cut(s) 1212
BstKTI GATC 6 cut(s) 423, 451, 894, 1143, 1204, 1572
BstMAI GTCTC 2 cut(s) 1122, 1572
BstMBI GATC 6 cut(s) 420, 448, 891, 1140, 1201, 1569
BstMWI GCNNNNNNNGC 4 cut(s) 120, 957, 1037, 1255
BstNI CCWGG 2 cut(s) 340, 944
BstSCI CCNGG 3 cut(s) 338, 942, 1513
BstSFI CTRYAG 1 cut(s) 885
BstSLI GKGCMC 1 cut(s) 1436
BstV1I GCAGC 2 cut(s) 163, 400
BstV2I GAAGAC 1 cut(s) 519
BstX2I RGATCY 2 cut(s) 420, 1569
BstXI CCANNNNNNTGG 1 cut(s) 125
BstYI RGATCY 2 cut(s) 420, 1569
Bsu36I CCTNAGG 1 cut(s) 1527
BsuRI GGCC 2 cut(s) 117, 1532
BtgI CCRYGG 2 cut(s) 964, 1414
BtsCI GGATG 3 cut(s) 311, 316, 1495
BtsI GCAGTG 4 cut(s) 253, 368, 621, 931
BtsIMutI CAGTG 9 cut(s) 205, 253, 368, 621, 786, 931, 1389, 1434, 1533
BveI ACCTGC 1 cut(s) 1542
Cac8I GCNNGC 3 cut(s) 79, 280, 922
CciI TCATGA 1 cut(s) 1539
CfoI GCGC 1 cut(s) 1212
Cfr13I GGNCC 1 cut(s) 746
CseI GACGC 1 cut(s) 880
Csp6I GTAC 3 cut(s) 689, 910, 1555
CspCI CAANNNNNGTGG 6 cut(s) 454, 489, 597, 632, 1225, 1260
CviAII CATG 7 cut(s) 814, 1070, 1312, 1415, 1427, 1540, 1558
CviQI GTAC 3 cut(s) 689, 910, 1555
DdeI CTNAG 7 cut(s) 189, 540, 734, 981, 1133, 1344, 1527
DpnI GATC 6 cut(s) 422, 450, 893, 1142, 1203, 1571
DpnII GATC 6 cut(s) 420, 448, 891, 1140, 1201, 1569
DraI TTTAAA 1 cut(s) 1081
DriI GACNNNNNGTC 1 cut(s) 1363
EaeI YGGCCR 1 cut(s) 115
Eam1104I CTCTTC 2 cut(s) 514, 1585
Eam1105I GACNNNNNGTC 1 cut(s) 1363
EarI CTCTTC 2 cut(s) 514, 1585
Ecl136II GAGCTC 1 cut(s) 10
Eco130I CCWWGG 2 cut(s) 284, 1414
Eco24I GRGCYC 1 cut(s) 12
Eco31I GGTCTC 1 cut(s) 1122
Eco47I GGWCC 1 cut(s) 746
Eco47III AGCGCT 1 cut(s) 1211
Eco53kI GAGCTC 1 cut(s) 10
Eco57I CTGAAG 2 cut(s) 1171, 1586
Eco81I CCTNAGG 1 cut(s) 1527
Eco88I CYCGRG 1 cut(s) 11
EcoICRI GAGCTC 1 cut(s) 10
EcoNI CCTNNNNNAGG 1 cut(s) 27
EcoRI GAATTC 2 cut(s) 50, 1224
EcoRII CCWGG 2 cut(s) 338, 942
EcoT14I CCWWGG 2 cut(s) 284, 1414
EcoT38I GRGCYC 1 cut(s) 12
ErhI CCWWGG 2 cut(s) 284, 1414
FaeI CATG 7 cut(s) 817, 1073, 1315, 1418, 1430, 1543, 1561
FalI AAGNNNNNCTT 6 cut(s) 648, 680, 1046, 1078, 1116, 1148
FaqI GGGAC 4 cut(s) 413, 830, 925, 1575
FatI CATG 7 cut(s) 813, 1069, 1311, 1414, 1426, 1539, 1557
FbaI TGATCA 2 cut(s) 448, 1140
Fnu4HI GCNGC 6 cut(s) 115, 177, 244, 414, 677, 1596
FokI GGATG 3 cut(s) 318, 323, 1502
FriOI GRGCYC 1 cut(s) 12
Fsp4HI GCNGC 6 cut(s) 115, 177, 244, 414, 677, 1596
FspBI CTAG 6 cut(s) 228, 320, 699, 761, 849, 921
GlaI GCGC 1 cut(s) 1211
GluI GCNGC 6 cut(s) 115, 177, 244, 414, 677, 1596
GsaI CCCAGC 2 cut(s) 165, 420
HaeII RGCGCY 1 cut(s) 1213
HaeIII GGCC 2 cut(s) 117, 1532
HapII CCGG 1 cut(s) 1515
HgaI GACGC 1 cut(s) 880
HhaI GCGC 1 cut(s) 1212
Hin1II CATG 7 cut(s) 817, 1073, 1315, 1418, 1430, 1543, 1561
Hin6I GCGC 1 cut(s) 1210
HinP1I GCGC 1 cut(s) 1210
HincII GTYRAC 3 cut(s) 1282, 1333, 1471
HindII GTYRAC 3 cut(s) 1282, 1333, 1471
HindIII AAGCTT 1 cut(s) 1038
HinfI GANTC 6 cut(s) 264, 329, 438, 535, 969, 1508
HpaI GTTAAC 1 cut(s) 1333
HpaII CCGG 1 cut(s) 1515
HphI GGTGA 4 cut(s) 417, 443, 886, 1390
Hpy166II GTNNAC 6 cut(s) 43, 361, 910, 1282, 1333, 1471
Hpy188I TCNGA 7 cut(s) 56, 192, 387, 543, 870, 1255, 1507
Hpy188III TCNNGA 5 cut(s) 362, 556, 1097, 1540, 1573
Hpy8I GTNNAC 6 cut(s) 43, 361, 910, 1282, 1333, 1471
Hpy99I CGWCG 2 cut(s) 504, 1501
HpyAV CCTTC 3 cut(s) 23, 637, 1315
HpyCH4III ACNGT 8 cut(s) 404, 553, 571, 886, 1294, 1393, 1438, 1537
HpyCH4IV ACGT 1 cut(s) 1499
HpyCH4V TGCA 7 cut(s) 179, 566, 836, 960, 1109, 1249, 1383
HpyF10VI GCNNNNNNNGC 4 cut(s) 120, 957, 1037, 1255
HpyF3I CTNAG 7 cut(s) 189, 540, 734, 981, 1133, 1344, 1527
HpySE526I ACGT 1 cut(s) 1499
Hsp92II CATG 7 cut(s) 817, 1073, 1315, 1418, 1430, 1543, 1561
HspAI GCGC 1 cut(s) 1210
Ksp22I TGATCA 2 cut(s) 448, 1140
KspAI GTTAAC 1 cut(s) 1333
Kzo9I GATC 6 cut(s) 420, 448, 891, 1140, 1201, 1569
LguI GCTCTTC 1 cut(s) 1585
LmnI GCTCC 4 cut(s) 224, 704, 1255, 1372
Lsp1109I GCAGC 2 cut(s) 163, 400
LweI GCATC 1 cut(s) 301
MaeI CTAG 6 cut(s) 228, 320, 699, 761, 849, 921
MaeII ACGT 1 cut(s) 1499
MaeIII GTNAC 2 cut(s) 503, 622
MalI GATC 6 cut(s) 422, 450, 893, 1142, 1203, 1571
MboI GATC 6 cut(s) 420, 448, 891, 1140, 1201, 1569
MboII GAAGA 6 cut(s) 17, 501, 519, 613, 1579, 1602
MfeI CAATTG 1 cut(s) 708
MflI RGATCY 2 cut(s) 420, 1569
MhlI GDGCHC 4 cut(s) 12, 213, 789, 1436
MluCI AATT 9 cut(s) 50, 141, 193, 354, 518, 708, 1104, 1116, 1224
MlyI GAGTC 1 cut(s) 338
MmeI TCCRAC 1 cut(s) 784
MroXI GAANNNNTTC 1 cut(s) 1032
MseI TTAA 5 cut(s) 432, 1080, 1206, 1308, 1332
MspA1I CMGCKG 3 cut(s) 161, 980, 1598
MspCI CTTAAG 1 cut(s) 1205
MspI CCGG 1 cut(s) 1515
MspR9I CCNGG 3 cut(s) 340, 944, 1515
MunI CAATTG 1 cut(s) 708
Mva1269I GAATGC 3 cut(s) 392, 838, 962
MvaI CCWGG 2 cut(s) 340, 944
MwoI GCNNNNNNNGC 4 cut(s) 120, 957, 1037, 1255
NciI CCSGG 1 cut(s) 1515
NcoI CCATGG 1 cut(s) 1414
NdeII GATC 6 cut(s) 420, 448, 891, 1140, 1201, 1569
NheI GCTAGC 1 cut(s) 920
NlaIII CATG 7 cut(s) 817, 1073, 1315, 1418, 1430, 1543, 1561
NlaIV GGNNCC 4 cut(s) 463, 478, 647, 748
NmuCI GTSAC 1 cut(s) 503
NspV TTCGAA 1 cut(s) 1228
PaeR7I CTCGAG 1 cut(s) 11
PagI TCATGA 1 cut(s) 1539
PciSI GCTCTTC 1 cut(s) 1585
PctI GAATGC 3 cut(s) 392, 838, 962
PdmI GAANNNNTTC 1 cut(s) 1032
PfeI GAWTC 5 cut(s) 264, 438, 535, 969, 1508
PflFI GACNNNGTC 1 cut(s) 1391
PkrI GCNGC 6 cut(s) 116, 178, 245, 415, 678, 1597
PleI GAGTC 1 cut(s) 337
PpsI GAGTC 1 cut(s) 337
PsiI TTATAA 2 cut(s) 68, 293
Psp124BI GAGCTC 1 cut(s) 12
Psp6I CCWGG 2 cut(s) 338, 942
PspFI CCCAGC 2 cut(s) 161, 416
PspGI CCWGG 2 cut(s) 338, 942
PspN4I GGNNCC 4 cut(s) 463, 478, 647, 748
PspPI GGNCC 1 cut(s) 746
PspXI VCTCGAGB 1 cut(s) 11
PsuI RGATCY 2 cut(s) 420, 1569
PsyI GACNNNGTC 1 cut(s) 1391
PvuII CAGCTG 3 cut(s) 161, 980, 1598
RsaI GTAC 3 cut(s) 690, 911, 1556
RsaNI GTAC 3 cut(s) 689, 910, 1555
SacI GAGCTC 1 cut(s) 12
SapI GCTCTTC 1 cut(s) 1585
SaqAI TTAA 5 cut(s) 432, 1080, 1206, 1308, 1332
SatI GCNGC 6 cut(s) 115, 177, 244, 414, 677, 1596
Sau3AI GATC 6 cut(s) 420, 448, 891, 1140, 1201, 1569
Sau96I GGNCC 1 cut(s) 746
ScaI AGTACT 1 cut(s) 690
SchI GAGTC 1 cut(s) 338
ScrFI CCNGG 3 cut(s) 340, 944, 1515
SduI GDGCHC 4 cut(s) 12, 213, 789, 1436
SfaNI GCATC 1 cut(s) 301
SfcI CTRYAG 1 cut(s) 885
Sfr274I CTCGAG 1 cut(s) 11
SfuI TTCGAA 1 cut(s) 1228
SinI GGWCC 1 cut(s) 746
SlaI CTCGAG 1 cut(s) 11
SmlI CTYRAG 3 cut(s) 11, 1205, 1573
SmoI CTYRAG 3 cut(s) 11, 1205, 1573
Sse9I AATT 9 cut(s) 50, 141, 193, 354, 518, 708, 1104, 1116, 1224
SsiI CCGC 5 cut(s) 38, 114, 243, 677, 738
SspMI CTAG 6 cut(s) 228, 320, 699, 761, 849, 921
SstI GAGCTC 1 cut(s) 12
StyD4I CCNGG 3 cut(s) 338, 942, 1513
StyI CCWWGG 2 cut(s) 284, 1414
TaaI ACNGT 8 cut(s) 404, 553, 571, 886, 1294, 1393, 1438, 1537
TaiI ACGT 1 cut(s) 1502
TaqI TCGA 7 cut(s) 12, 213, 486, 879, 1155, 1228, 1496
TasI AATT 9 cut(s) 50, 141, 193, 354, 518, 708, 1104, 1116, 1224
TatI WGTACW 2 cut(s) 688, 909
TauI GCSGC 3 cut(s) 117, 246, 679
TfiI GAWTC 5 cut(s) 264, 438, 535, 969, 1508
Tru1I TTAA 5 cut(s) 432, 1080, 1206, 1308, 1332
Tru9I TTAA 5 cut(s) 432, 1080, 1206, 1308, 1332
TscAI CASTG 9 cut(s) 205, 253, 375, 621, 786, 931, 1396, 1441, 1540
TseFI GTSAC 1 cut(s) 503
TseI GCWGC 3 cut(s) 176, 413, 1595
Tsp45I GTSAC 1 cut(s) 503
TspDTI ATGAA 4 cut(s) 63, 651, 845, 1033
TspGWI ACGGA 1 cut(s) 981
TspRI CASTG 9 cut(s) 205, 253, 375, 621, 786, 931, 1396, 1441, 1540
Tth111I GACNNNGTC 1 cut(s) 1391
Vha464I CTTAAG 1 cut(s) 1205
VpaK11BI GGWCC 1 cut(s) 746
XagI CCTNNNNNAGG 1 cut(s) 27
XapI RAATTY 3 cut(s) 50, 193, 1224
XhoI CTCGAG 1 cut(s) 11
XmnI GAANNNNTTC 1 cut(s) 1032
XspI CTAG 6 cut(s) 228, 320, 699, 761, 849, 921
ZrmI AGTACT 1 cut(s) 690
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.