Rh2CG418200

Belongs to the GMC oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0011318
Physical Location & Seq
Forward (+)
57160625 .. 57165537
4913 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG418200.1

Sequence Viewer

Length: 1968 bp
ATGGGAAGGAAATTTTATTATTTGTTTATTTTGATGCATGAATTTGTGGCAATTATTTGGGTATATAAATTTGTGGACTCACACAAAACAAGGCCAACCAGTGGAAGCCACATACAGGGAAGAAGCTGCAGCAGTTTCTTCTGTGAGAGTGCTTTTCTGAGACCTCTGTCTGCTACCTTGATAATGGCTTTGGTTAATGGAGCACTAGTACTCAAGAAGCTCATTTTCTTTTTGGCTTTGTGCCTCATCAGCTTACTCTCTTCTTCTCAAGGTAAGGCGGTTTACAATGAATTCAGATACCCATTTATAAAAAAAGCAAGCTCTTTCCCATCTGTATCATCATCTTCATCAAGCGGCCACAGCAATGACTATGACTACATAATTGTGGGAGGGGGCACAGCTGGGTGTCCTTTGGCTGCAACCCTCTCTCAGAATTTCAGTGTTTTGGTGCTCGAAAGAGGGGGGGTGCCTTTTGCCAATTCCAATGTCTCATTCCTACAAAACTTCCACATTGCCTTGGCAGACACTTCACCTAAATCTCCTTCTCAGCCCTTTGTTTCCACTGATGGAGTGATCAATTCCAGAGCTAGGGTTTTGGGTGGCGGCAGTGTCATCAATGCTGGATTCTATACCAGAGCAAGCCCAAGGTTTATAAAGAGAGTGGGATGGGATGCCAAGCTAGTAAATGAGTCATATCCCTGGATTGAGAAGCAAATTGTTCACGAGCCACAGCTTGAACCATATCAGATGGCATTCAGGGACAGTCTTTTGGATGCTGGGGTCTCACCTTTTAACGGATTCACTTATGATCACCTTTATGGAACCAAAGTTGGTGGAACCATTTTCGATAGATTTGGTCGTCGTCACTCTTCTGCTGAACTGCTGTCTTCTGGGAATCCTCAGAAGCTCACAGTCTTGATTTATGCAACAGTTCAAAAGATTGTTTTTGACACATCAGGGAAGAAACCAAAGGCAGTGGGAGTTACCTTCAAAGATGAAAATGGGAGCCAACATCAAGCATTTCTTGTTGATAAGCCACAGAGTGAAGTACTATTGTCTAGTGGAGCAATTGGAAGCCCTCAAATGTTATTGCTAAGCGGTATTGGACCCAAAGCTGACCTAGAGAAGTTGAACATTCCAGTGGTGCTCAATAATGAGTTTGTTGGAAAAGGCATGGCTGATAATCCAATGAATGCAATCTTTGTCCCTAGCAGTAGAGCAGAAAAGCAGACGCTAATCGAAACTGTAGGGATCACCAAAATGGGTGTGTACATTGAAGCTAGCAGTGGATTTGGGCAGTCCCTGGATAGCATTGAATGCAACCACGGAATCCTGTCAGCTGAGATTGGACAGCTATCTACTATTCCTCCAAAGCAAAGAACCCCAGAAGCCATTCAAGCTTTCATCAAACACAAGAGAAACTTGCCCCATGAGGCATTTAAAGGGGGCTTTATTCTGGAAAAAATTGCAAGTCCAATTTCCAAAGGAGACCTTAGCCTGATCAACACCAATGTCGATGATAACCCCTCTGTCAGCTTCAACTACTTCAGCCACCCCTATGATCTTAAGCGCTGTGTTGATGGAATTCGAATAGCCACAAAGGTTGTGCAATCGGAGCATTTCACAAACTACACAAGAGTTGACAAGCAAACTGTGGAAAAGATACTTAACATGAGTGTGAAGGCTAATGTTAACCTCATACCTAAGAATATCAATGACACAAAGTCATTGGAGCAGTTCTGCAAAGACACTGTCATCACTATTTGGCATTACCATGGTGGGTGTCATGTGGGCACTGTGGTTAGCCCTGACAACAAAGTTCTTGGTGTCAACAGGGTCAGGGTTGTGGATGGCTCGACGTTTTCTGAATCCCCCGGAACTAATCCTCAGGCCACTGTCATGATGATGGGCAGGTACATGGGACTGAAGATCTTGAGAGACAGATTGGGAAGAGCAGCTGGTATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00073 map00073
Pfam Domains
Protein Families
GMC_oxred_C GMC_oxred_N

Protein Analysis

655

Amino Acids

71.69

Weight (kDa)

9.28

Isoelectric Point (pI)

45.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GMC_oxred_N PF00732 124 - 395 5.3e-19 GMC oxidoreductase
GMC_oxred_C PF05199 492 - 637 5.7e-25 GMC oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011318)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G72970 AT1G72970
fragaria_vesca FvH4_6g33360 FvH4_6g33360 FvH4_6g33360
malus_domestica MD09G1193200.v1.1
prunus_persica Prupe.3G049600_v2.0.a1
pyrus_communis pycom09g10980
rosa_chinensis RchiOBHm_Chr2g0143221
rosa_laevigata RLG00000020016
rosa_multiflora Rmu_sc0003950.1_g000006
rosa_roxburghii Rroxscaffold_2G00102010
rosa_rugosa Rorug02G0379500 Rorug02G0379600 Rorug02G0379700
rosa_samantha Rh2AG432400 Rh2BG441000 Rh2CG418200 Rh2DG451100
rosa_wichuraiana Rw2G035300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 308, 653
Acc36I ACCTGC 1 cut(s) 1902
AccB1I GGYRCC 1 cut(s) 466
AccB7I CCANNNNNTGG 1 cut(s) 101
AciI CCGC 4 cut(s) 278, 354, 603, 1098
AclWI GGATC 1 cut(s) 1259
AcoI YGGCCR 1 cut(s) 355
AcsI RAATTY 6 cut(s) 11, 41, 68, 290, 433, 1584
AcuI CTGAAG 2 cut(s) 1531, 1946
AdeI CACNNNGTG 1 cut(s) 1043
AfaI GTAC 4 cut(s) 210, 1050, 1271, 1916
AfeI AGCGCT 1 cut(s) 1571
AfiI CCNNNNNNNGG 4 cut(s) 101, 115, 588, 794
AflII CTTAAG 1 cut(s) 1565
AgsI TTSAA 8 cut(s) 737, 935, 991, 1132, 1277, 1316, 1397, 1540
AhdI GACNNNNNGTC 1 cut(s) 1723
AhlI ACTAGT 1 cut(s) 205
AjnI CCWGG 2 cut(s) 698, 1302
AjuI GAANNNNNNNTTGG 2 cut(s) 476, 508
Alw21I GWGCWC 3 cut(s) 205, 453, 1149
Alw26I GTCTC 5 cut(s) 154, 493, 787, 1482, 1932
AlwI GGATC 1 cut(s) 1259
AlwNI CAGNNNCTG 1 cut(s) 1303
Aor51HI AGCGCT 1 cut(s) 1571
AoxI GGCC 3 cut(s) 92, 355, 1890
ApeKI GCWGC 4 cut(s) 126, 129, 416, 1955
ApoI RAATTY 6 cut(s) 11, 41, 68, 290, 433, 1584
ArsI GACNNNNNNTTYG 2 cut(s) 1737, 1769
Asp700I GAANNNNTTC 1 cut(s) 1392
AspLEI GCGC 1 cut(s) 1572
AspS9I GGNCC 1 cut(s) 1106
AsuC2I CCSGG 1 cut(s) 1875
AsuHPI GGTGA 4 cut(s) 522, 777, 803, 1246
AsuII TTCGAA 1 cut(s) 1588
AsuNHI GCTAGC 1 cut(s) 1280
AvaII GGWCC 1 cut(s) 1106
AxyI CCTNAGG 1 cut(s) 1887
BaeGI GKGCMC 2 cut(s) 398, 1796
BanI GGYRCC 1 cut(s) 466
BauI CACGAG 1 cut(s) 722
BbsI GAAGAC 1 cut(s) 879
Bbv12I GWGCWC 3 cut(s) 205, 453, 1149
BbvI GCAGC 3 cut(s) 113, 141, 403
BccI CCATC 7 cut(s) 337, 560, 660, 742, 1574, 1844, 1900
BciT130I CCWGG 2 cut(s) 700, 1304
BclI TGATCA 3 cut(s) 573, 808, 1500
BcnI CCSGG 1 cut(s) 1875
BcoDI GTCTC 5 cut(s) 154, 493, 787, 1482, 1932
BcuI ACTAGT 1 cut(s) 205
BfaI CTAG 7 cut(s) 206, 588, 680, 1059, 1121, 1209, 1281
BfmI CTRYAG 2 cut(s) 127, 1245
BfoI RGCGCY 1 cut(s) 1573
BfrI CTTAAG 1 cut(s) 1565
BfuAI ACCTGC 1 cut(s) 1902
BglII AGATCT 1 cut(s) 1929
BisI GCNGC 6 cut(s) 127, 130, 355, 417, 604, 1956
BlpI GCTNAGC 1 cut(s) 1094
BlsI GCNGC 6 cut(s) 128, 131, 356, 418, 605, 1957
BmcAI AGTACT 2 cut(s) 210, 1050
Bme1390I CCNGG 3 cut(s) 700, 1304, 1875
Bme18I GGWCC 1 cut(s) 1106
BmeRI GACNNNNNGTC 1 cut(s) 1723
BmgT120I GGNCC 1 cut(s) 1106
BmiI GGNNCC 5 cut(s) 468, 823, 838, 1007, 1108
BmrFI CCNGG 3 cut(s) 700, 1304, 1875
BmsI GCATC 3 cut(s) 24, 661, 763
BmtI GCTAGC 1 cut(s) 1284
BoxI GACNNNNGTC 1 cut(s) 166
BpiI GAAGAC 1 cut(s) 879
Bpu10I CCTNAGC 1 cut(s) 1493
Bpu1102I GCTNAGC 1 cut(s) 1094
Bpu14I TTCGAA 1 cut(s) 1588
BpuEI CTTGAG 3 cut(s) 197, 252, 1954
BpuMI CCSGG 1 cut(s) 1875
BsaI GGTCTC 3 cut(s) 154, 787, 1482
BsaJI CCNNGG 7 cut(s) 516, 644, 698, 1302, 1324, 1774, 1873
BsaXI ACNNNNNCTCC 4 cut(s) 192, 222, 1351, 1381
Bsc4I CCNNNNNNNGG 4 cut(s) 101, 115, 588, 794
Bse1I ACTGG 2 cut(s) 99, 1139
Bse21I CCTNAGG 1 cut(s) 1887
Bse3DI GCAATG 2 cut(s) 370, 510
BseBI CCWGG 2 cut(s) 700, 1304
BseDI CCNNGG 7 cut(s) 516, 644, 698, 1302, 1324, 1774, 1873
BseGI GGATG 4 cut(s) 671, 676, 778, 1855
BseLI CCNNNNNNNGG 4 cut(s) 101, 115, 588, 794
BseMI GCAATG 2 cut(s) 370, 510
BseMII CTCAG 6 cut(s) 149, 443, 560, 914, 1332, 1901
BseNI ACTGG 2 cut(s) 99, 1139
BseSI GKGCMC 2 cut(s) 398, 1796
BseXI GCAGC 3 cut(s) 113, 141, 403
BseYI CCCAGC 2 cut(s) 401, 776
BshFI GGCC 3 cut(s) 94, 357, 1892
BshNI GGYRCC 1 cut(s) 466
BsiHKAI GWGCWC 3 cut(s) 205, 453, 1149
BsiSI CCGG 1 cut(s) 1875
BslFI GGGAC 4 cut(s) 773, 1190, 1285, 1935
BslI CCNNNNNNNGG 4 cut(s) 101, 115, 588, 794
BsmAI GTCTC 5 cut(s) 154, 493, 787, 1482, 1932
BsmFI GGGAC 4 cut(s) 773, 1190, 1285, 1935
BsmI GAATGC 3 cut(s) 752, 1198, 1322
BsnI GGCC 3 cut(s) 94, 357, 1892
Bso31I GGTCTC 3 cut(s) 154, 787, 1482
Bsp119I TTCGAA 1 cut(s) 1588
Bsp1286I GDGCHC 5 cut(s) 205, 398, 453, 1149, 1796
Bsp1407I TGTACA 1 cut(s) 1269
Bsp143I GATC 6 cut(s) 573, 808, 1251, 1500, 1561, 1929
Bsp1720I GCTNAGC 1 cut(s) 1094
Bsp19I CCATGG 1 cut(s) 1774
BspACI CCGC 4 cut(s) 278, 354, 603, 1098
BspANI GGCC 3 cut(s) 94, 357, 1892
BspCNI CTCAG 6 cut(s) 150, 442, 559, 913, 1333, 1900
BspHI TCATGA 1 cut(s) 1899
BspLI GGNNCC 5 cut(s) 468, 823, 838, 1007, 1108
BspMAI CTGCAG 1 cut(s) 131
BspMI ACCTGC 1 cut(s) 1902
BspOI GCTAGC 1 cut(s) 1284
BspPI GGATC 1 cut(s) 1259
BspQI GCTCTTC 1 cut(s) 1945
BspT104I TTCGAA 1 cut(s) 1588
BspT107I GGYRCC 1 cut(s) 466
BspTI CTTAAG 1 cut(s) 1565
BspTNI GGTCTC 3 cut(s) 154, 787, 1482
BsrDI GCAATG 2 cut(s) 370, 510
BsrGI TGTACA 1 cut(s) 1269
BsrI ACTGG 2 cut(s) 99, 1139
BssECI CCNNGG 7 cut(s) 516, 644, 698, 1302, 1324, 1774, 1873
BssMI GATC 6 cut(s) 573, 808, 1251, 1500, 1561, 1929
BssSI CACGAG 1 cut(s) 722
BssT1I CCWWGG 3 cut(s) 516, 644, 1774
Bst2BI CACGAG 1 cut(s) 722
Bst2UI CCWGG 2 cut(s) 700, 1304
Bst4CI ACNGT 8 cut(s) 764, 913, 931, 1246, 1654, 1753, 1798, 1897
Bst6I CTCTTC 3 cut(s) 265, 874, 1945
BstAFI CTTAAG 1 cut(s) 1565
BstAPI GCANNNNNTGC 1 cut(s) 1317
BstAUI TGTACA 1 cut(s) 1269
BstBI TTCGAA 1 cut(s) 1588
BstC8I GCNNGC 3 cut(s) 319, 640, 1282
BstDEI CTNAG 9 cut(s) 158, 429, 546, 900, 1094, 1341, 1493, 1704, 1887
BstDSI CCRYGG 2 cut(s) 1324, 1774
BstF5I GGATG 4 cut(s) 671, 676, 778, 1855
BstH2I RGCGCY 1 cut(s) 1573
BstHHI GCGC 1 cut(s) 1572
BstKTI GATC 6 cut(s) 576, 811, 1254, 1503, 1564, 1932
BstMAI GTCTC 5 cut(s) 154, 493, 787, 1482, 1932
BstMBI GATC 6 cut(s) 573, 808, 1251, 1500, 1561, 1929
BstMWI GCNNNNNNNGC 5 cut(s) 249, 360, 1317, 1397, 1615
BstNI CCWGG 2 cut(s) 700, 1304
BstPAI GACNNNNGTC 1 cut(s) 166
BstSCI CCNGG 3 cut(s) 698, 1302, 1873
BstSFI CTRYAG 2 cut(s) 127, 1245
BstSLI GKGCMC 2 cut(s) 398, 1796
BstV1I GCAGC 3 cut(s) 113, 141, 403
BstV2I GAAGAC 1 cut(s) 879
BstX2I RGATCY 1 cut(s) 1929
BstYI RGATCY 1 cut(s) 1929
Bsu36I CCTNAGG 1 cut(s) 1887
BsuRI GGCC 3 cut(s) 94, 357, 1892
BtgI CCRYGG 2 cut(s) 1324, 1774
BtsCI GGATG 4 cut(s) 671, 676, 778, 1855
BtsI GCAGTG 3 cut(s) 613, 981, 1291
BveI ACCTGC 1 cut(s) 1902
Cac8I GCNNGC 3 cut(s) 319, 640, 1282
CaiI CAGNNNCTG 1 cut(s) 1303
CciI TCATGA 1 cut(s) 1899
CfoI GCGC 1 cut(s) 1572
Cfr13I GGNCC 1 cut(s) 1106
CseI GACGC 1 cut(s) 1240
Csp6I GTAC 4 cut(s) 209, 1049, 1270, 1915
CspCI CAANNNNNGTGG 6 cut(s) 814, 849, 957, 992, 1585, 1620
CviAII CATG 8 cut(s) 38, 1174, 1430, 1672, 1775, 1787, 1900, 1918
CviQI GTAC 4 cut(s) 209, 1049, 1270, 1915
DdeI CTNAG 9 cut(s) 158, 429, 546, 900, 1094, 1341, 1493, 1704, 1887
DpnI GATC 6 cut(s) 575, 810, 1253, 1502, 1563, 1931
DpnII GATC 6 cut(s) 573, 808, 1251, 1500, 1561, 1929
DraI TTTAAA 1 cut(s) 1441
DraIII CACNNNGTG 1 cut(s) 1043
DriI GACNNNNNGTC 1 cut(s) 1723
EaeI YGGCCR 1 cut(s) 355
Eam1104I CTCTTC 3 cut(s) 265, 874, 1945
Eam1105I GACNNNNNGTC 1 cut(s) 1723
EarI CTCTTC 3 cut(s) 265, 874, 1945
Eco130I CCWWGG 3 cut(s) 516, 644, 1774
Eco31I GGTCTC 3 cut(s) 154, 787, 1482
Eco47I GGWCC 1 cut(s) 1106
Eco47III AGCGCT 1 cut(s) 1571
Eco57I CTGAAG 2 cut(s) 1531, 1946
Eco81I CCTNAGG 1 cut(s) 1887
EcoRI GAATTC 2 cut(s) 290, 1584
EcoRII CCWGG 2 cut(s) 698, 1302
EcoT14I CCWWGG 3 cut(s) 516, 644, 1774
EcoT22I ATGCAT 1 cut(s) 39
ErhI CCWWGG 3 cut(s) 516, 644, 1774
FaeI CATG 8 cut(s) 41, 1177, 1433, 1675, 1778, 1790, 1903, 1921
FalI AAGNNNNNCTT 6 cut(s) 1008, 1040, 1406, 1438, 1476, 1508
FaqI GGGAC 4 cut(s) 773, 1190, 1285, 1935
FatI CATG 8 cut(s) 37, 1173, 1429, 1671, 1774, 1786, 1899, 1917
FbaI TGATCA 3 cut(s) 573, 808, 1500
Fnu4HI GCNGC 6 cut(s) 127, 130, 355, 417, 604, 1956
FokI GGATG 4 cut(s) 678, 683, 785, 1862
Fsp4HI GCNGC 6 cut(s) 127, 130, 355, 417, 604, 1956
FspBI CTAG 7 cut(s) 206, 588, 680, 1059, 1121, 1209, 1281
GlaI GCGC 1 cut(s) 1571
GluI GCNGC 6 cut(s) 127, 130, 355, 417, 604, 1956
GsaI CCCAGC 2 cut(s) 405, 780
HaeII RGCGCY 1 cut(s) 1573
HaeIII GGCC 3 cut(s) 94, 357, 1892
HapII CCGG 1 cut(s) 1875
HgaI GACGC 1 cut(s) 1240
HhaI GCGC 1 cut(s) 1572
Hin1II CATG 8 cut(s) 41, 1177, 1433, 1675, 1778, 1790, 1903, 1921
Hin6I GCGC 1 cut(s) 1570
HinP1I GCGC 1 cut(s) 1570
HincII GTYRAC 3 cut(s) 1642, 1693, 1831
HindII GTYRAC 3 cut(s) 1642, 1693, 1831
HindIII AAGCTT 1 cut(s) 1398
HinfI GANTC 7 cut(s) 77, 624, 689, 798, 895, 1329, 1868
HpaI GTTAAC 1 cut(s) 1693
HpaII CCGG 1 cut(s) 1875
HphI GGTGA 4 cut(s) 522, 777, 803, 1246
Hpy166II GTNNAC 7 cut(s) 76, 283, 721, 1270, 1642, 1693, 1831
Hpy188I TCNGA 7 cut(s) 159, 296, 432, 747, 903, 1615, 1867
Hpy188III TCNNGA 7 cut(s) 214, 582, 722, 916, 1457, 1900, 1933
Hpy8I GTNNAC 7 cut(s) 76, 283, 721, 1270, 1642, 1693, 1831
Hpy99I CGWCG 2 cut(s) 864, 1861
HpyAV CCTTC 3 cut(s) 552, 997, 1675
HpyCH4III ACNGT 8 cut(s) 764, 913, 931, 1246, 1654, 1753, 1798, 1897
HpyCH4IV ACGT 1 cut(s) 1859
HpyCH4V TGCA 9 cut(s) 37, 129, 419, 926, 1196, 1320, 1469, 1609, 1743
HpyF10VI GCNNNNNNNGC 5 cut(s) 249, 360, 1317, 1397, 1615
HpyF3I CTNAG 9 cut(s) 158, 429, 546, 900, 1094, 1341, 1493, 1704, 1887
HpySE526I ACGT 1 cut(s) 1859
Hsp92II CATG 8 cut(s) 41, 1177, 1433, 1675, 1778, 1790, 1903, 1921
HspAI GCGC 1 cut(s) 1570
Ksp22I TGATCA 3 cut(s) 573, 808, 1500
KspAI GTTAAC 1 cut(s) 1693
Kzo9I GATC 6 cut(s) 573, 808, 1251, 1500, 1561, 1929
LguI GCTCTTC 1 cut(s) 1945
LmnI GCTCC 5 cut(s) 200, 1005, 1064, 1615, 1732
Lsp1109I GCAGC 3 cut(s) 113, 141, 403
LweI GCATC 3 cut(s) 24, 661, 763
MaeI CTAG 7 cut(s) 206, 588, 680, 1059, 1121, 1209, 1281
MaeII ACGT 1 cut(s) 1859
MaeIII GTNAC 2 cut(s) 863, 982
MalI GATC 6 cut(s) 575, 810, 1253, 1502, 1563, 1931
MboI GATC 6 cut(s) 573, 808, 1251, 1500, 1561, 1929
MfeI CAATTG 1 cut(s) 1068
MflI RGATCY 1 cut(s) 1929
MhlI GDGCHC 5 cut(s) 205, 398, 453, 1149, 1796
MlyI GAGTC 2 cut(s) 71, 698
MmeI TCCRAC 1 cut(s) 1144
Mph1103I ATGCAT 1 cut(s) 39
MroXI GAANNNNTTC 1 cut(s) 1392
MseI TTAA 6 cut(s) 195, 792, 1440, 1566, 1668, 1692
MspA1I CMGCKG 3 cut(s) 401, 1340, 1958
MspCI CTTAAG 1 cut(s) 1565
MspI CCGG 1 cut(s) 1875
MspR9I CCNGG 3 cut(s) 700, 1304, 1875
MunI CAATTG 1 cut(s) 1068
Mva1269I GAATGC 3 cut(s) 752, 1198, 1322
MvaI CCWGG 2 cut(s) 700, 1304
MwoI GCNNNNNNNGC 5 cut(s) 249, 360, 1317, 1397, 1615
NciI CCSGG 1 cut(s) 1875
NcoI CCATGG 1 cut(s) 1774
NdeII GATC 6 cut(s) 573, 808, 1251, 1500, 1561, 1929
NheI GCTAGC 1 cut(s) 1280
NlaIII CATG 8 cut(s) 41, 1177, 1433, 1675, 1778, 1790, 1903, 1921
NlaIV GGNNCC 5 cut(s) 468, 823, 838, 1007, 1108
NmuCI GTSAC 1 cut(s) 863
NsiI ATGCAT 1 cut(s) 39
NspV TTCGAA 1 cut(s) 1588
PagI TCATGA 1 cut(s) 1899
PciSI GCTCTTC 1 cut(s) 1945
PctI GAATGC 3 cut(s) 752, 1198, 1322
PdmI GAANNNNTTC 1 cut(s) 1392
PfeI GAWTC 5 cut(s) 624, 798, 895, 1329, 1868
PflFI GACNNNGTC 1 cut(s) 1751
PflMI CCANNNNNTGG 1 cut(s) 101
PkrI GCNGC 6 cut(s) 128, 131, 356, 418, 605, 1957
PleI GAGTC 2 cut(s) 71, 697
PpsI GAGTC 2 cut(s) 71, 697
PshAI GACNNNNGTC 1 cut(s) 166
PsiI TTATAA 2 cut(s) 308, 653
Psp6I CCWGG 2 cut(s) 698, 1302
PspFI CCCAGC 2 cut(s) 401, 776
PspGI CCWGG 2 cut(s) 698, 1302
PspN4I GGNNCC 5 cut(s) 468, 823, 838, 1007, 1108
PspPI GGNCC 1 cut(s) 1106
PstI CTGCAG 1 cut(s) 131
PstNI CAGNNNCTG 1 cut(s) 1303
PsuI RGATCY 1 cut(s) 1929
PsyI GACNNNGTC 1 cut(s) 1751
PvuII CAGCTG 3 cut(s) 401, 1340, 1958
RsaI GTAC 4 cut(s) 210, 1050, 1271, 1916
RsaNI GTAC 4 cut(s) 209, 1049, 1270, 1915
SapI GCTCTTC 1 cut(s) 1945
SaqAI TTAA 6 cut(s) 195, 792, 1440, 1566, 1668, 1692
SatI GCNGC 6 cut(s) 127, 130, 355, 417, 604, 1956
Sau3AI GATC 6 cut(s) 573, 808, 1251, 1500, 1561, 1929
Sau96I GGNCC 1 cut(s) 1106
ScaI AGTACT 2 cut(s) 210, 1050
SchI GAGTC 2 cut(s) 71, 698
ScrFI CCNGG 3 cut(s) 700, 1304, 1875
SduI GDGCHC 5 cut(s) 205, 398, 453, 1149, 1796
SfaNI GCATC 3 cut(s) 24, 661, 763
SfcI CTRYAG 2 cut(s) 127, 1245
SfuI TTCGAA 1 cut(s) 1588
SinI GGWCC 1 cut(s) 1106
SmlI CTYRAG 4 cut(s) 212, 267, 1565, 1933
SmoI CTYRAG 4 cut(s) 212, 267, 1565, 1933
SpeI ACTAGT 1 cut(s) 205
SsiI CCGC 4 cut(s) 278, 354, 603, 1098
SspMI CTAG 7 cut(s) 206, 588, 680, 1059, 1121, 1209, 1281
StyD4I CCNGG 3 cut(s) 698, 1302, 1873
StyI CCWWGG 3 cut(s) 516, 644, 1774
TaaI ACNGT 8 cut(s) 764, 913, 931, 1246, 1654, 1753, 1798, 1897
TaiI ACGT 1 cut(s) 1862
TaqI TCGA 6 cut(s) 453, 846, 1239, 1515, 1588, 1856
TatI WGTACW 3 cut(s) 208, 1048, 1269
TauI GCSGC 2 cut(s) 357, 606
TfiI GAWTC 5 cut(s) 624, 798, 895, 1329, 1868
Tru1I TTAA 6 cut(s) 195, 792, 1440, 1566, 1668, 1692
Tru9I TTAA 6 cut(s) 195, 792, 1440, 1566, 1668, 1692
TseFI GTSAC 1 cut(s) 863
TseI GCWGC 4 cut(s) 126, 129, 416, 1955
Tsp45I GTSAC 1 cut(s) 863
TspDTI ATGAA 6 cut(s) 54, 303, 336, 1011, 1205, 1393
TspGWI ACGGA 2 cut(s) 810, 1341
Tth111I GACNNNGTC 1 cut(s) 1751
Van91I CCANNNNNTGG 1 cut(s) 101
Vha464I CTTAAG 1 cut(s) 1565
VpaK11BI GGWCC 1 cut(s) 1106
XapI RAATTY 6 cut(s) 11, 41, 68, 290, 433, 1584
XmnI GAANNNNTTC 1 cut(s) 1392
XspI CTAG 7 cut(s) 206, 588, 680, 1059, 1121, 1209, 1281
ZrmI AGTACT 2 cut(s) 210, 1050
Zsp2I ATGCAT 1 cut(s) 39
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.