Rroxscaffold_2G00113020

Non-specific serine threonine protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
38532979 .. 38537631
4653 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00113020.1

Sequence Viewer

Length: 405 bp
ATGGAGCAAGATAAGAATGTTGAAGCTTCAAATCCATTTGGTCAATGTCATTGTTTGTATGCCAAAACATTAGGTGAAGGGGAGGCAAGAAAGCTTTTTCAGCAATTGATAGATGCGGTGGACTACCGTCACAATAAAGGTGTATATCACAGAGAACTAAAGGAAACGACTATTTCTACACATATTGCTGTTGCATTGGAAAATGAAAGAATCGAGTTTCAACAGTCTTCAATTATGATAGTGAGGACAGGGAAGGAAGACATTAGAACCGTAAACAAGGATGCCCACTCTGTGGTAGTGATCCAATGCTCGAAAAGCAACACAAATGAGTTGGAGTGGAATCTTAGAGCAAGAGAAGCAAGTACTATGGATTACCTCATTTCAGCATATGAGCTCCAAGTTTGA

Protein Analysis

134

Amino Acids

15.39

Weight (kDa)

5.72

Isoelectric Point (pI)

33.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0017900)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 292
AciI CCGC 1 cut(s) 116
AclWI GGATC 1 cut(s) 295
AdeI CACNNNGTG 1 cut(s) 292
AfaI GTAC 1 cut(s) 364
AfiI CCNNNNNNNGG 1 cut(s) 292
AgsI TTSAA 4 cut(s) 23, 30, 221, 231
AluBI AGCT 3 cut(s) 26, 94, 394
AluI AGCT 3 cut(s) 26, 94, 394
Alw21I GWGCWC 1 cut(s) 396
AlwI GGATC 1 cut(s) 295
AsuHPI GGTGA 1 cut(s) 86
BanII GRGCYC 1 cut(s) 396
BbsI GAAGAC 2 cut(s) 219, 264
Bbv12I GWGCWC 1 cut(s) 396
BmcAI AGTACT 1 cut(s) 364
BmsI GCATC 2 cut(s) 103, 271
BoxI GACNNNNGTC 1 cut(s) 126
BpiI GAAGAC 2 cut(s) 219, 264
Bsc4I CCNNNNNNNGG 1 cut(s) 292
BseGI GGATG 1 cut(s) 286
BseLI CCNNNNNNNGG 1 cut(s) 292
BsiHKAI GWGCWC 1 cut(s) 396
BslI CCNNNNNNNGG 1 cut(s) 292
Bsp1286I GDGCHC 1 cut(s) 396
Bsp143I GATC 1 cut(s) 300
BspACI CCGC 1 cut(s) 116
BspPI GGATC 1 cut(s) 295
BssMI GATC 1 cut(s) 300
Bst4CI ACNGT 3 cut(s) 128, 225, 271
BstDEI CTNAG 1 cut(s) 344
BstF5I GGATG 1 cut(s) 286
BstKTI GATC 1 cut(s) 303
BstMBI GATC 1 cut(s) 300
BstMWI GCNNNNNNNGC 3 cut(s) 100, 315, 356
BstPAI GACNNNNGTC 1 cut(s) 126
BstV2I GAAGAC 2 cut(s) 219, 264
BtsCI GGATG 1 cut(s) 286
Csp6I GTAC 1 cut(s) 363
CviJI RGCY 3 cut(s) 26, 94, 394
CviKI_1 RGCY 3 cut(s) 26, 94, 394
CviQI GTAC 1 cut(s) 363
DdeI CTNAG 1 cut(s) 344
DpnI GATC 1 cut(s) 302
DpnII GATC 1 cut(s) 300
DraIII CACNNNGTG 1 cut(s) 292
Ecl136II GAGCTC 1 cut(s) 394
Eco24I GRGCYC 1 cut(s) 396
Eco53kI GAGCTC 1 cut(s) 394
EcoICRI GAGCTC 1 cut(s) 394
EcoT38I GRGCYC 1 cut(s) 396
FaiI YATR 7 cut(s) 60, 145, 183, 236, 368, 388, 390
FauNDI CATATG 1 cut(s) 388
FokI GGATG 1 cut(s) 293
FriOI GRGCYC 1 cut(s) 396
HindIII AAGCTT 2 cut(s) 24, 92
HinfI GANTC 2 cut(s) 210, 340
HphI GGTGA 1 cut(s) 86
Hpy166II GTNNAC 2 cut(s) 121, 274
Hpy8I GTNNAC 2 cut(s) 121, 274
HpyAV CCTTC 2 cut(s) 71, 247
HpyCH4III ACNGT 3 cut(s) 128, 225, 271
HpyCH4V TGCA 1 cut(s) 194
HpyF10VI GCNNNNNNNGC 3 cut(s) 100, 315, 356
HpyF3I CTNAG 1 cut(s) 344
Kzo9I GATC 1 cut(s) 300
LmnI GCTCC 2 cut(s) 4, 399
LpnPI CCDG 1 cut(s) 234
LweI GCATC 2 cut(s) 103, 271
MaeIII GTNAC 1 cut(s) 128
MalI GATC 1 cut(s) 302
MboI GATC 1 cut(s) 300
MboII GAAGA 2 cut(s) 219, 269
MfeI CAATTG 1 cut(s) 104
MhlI GDGCHC 1 cut(s) 396
MluCI AATT 2 cut(s) 104, 231
MmeI TCCRAC 1 cut(s) 312
MnlI CCTC 3 cut(s) 76, 237, 386
MunI CAATTG 1 cut(s) 104
MwoI GCNNNNNNNGC 3 cut(s) 100, 315, 356
NdeI CATATG 1 cut(s) 388
NdeII GATC 1 cut(s) 300
NmuCI GTSAC 1 cut(s) 128
PfeI GAWTC 2 cut(s) 210, 340
PflMI CCANNNNNTGG 1 cut(s) 292
PshAI GACNNNNGTC 1 cut(s) 126
Psp124BI GAGCTC 1 cut(s) 396
RsaI GTAC 1 cut(s) 364
RsaNI GTAC 1 cut(s) 363
SacI GAGCTC 1 cut(s) 396
Sau3AI GATC 1 cut(s) 300
ScaI AGTACT 1 cut(s) 364
SduI GDGCHC 1 cut(s) 396
SetI ASST 6 cut(s) 28, 76, 96, 142, 378, 396
SfaNI GCATC 2 cut(s) 103, 271
SgeI CNNG 8 cut(s) 20, 99, 226, 261, 289, 322, 363, 372
Sse9I AATT 2 cut(s) 104, 231
SsiI CCGC 1 cut(s) 116
SstI GAGCTC 1 cut(s) 396
TaaI ACNGT 3 cut(s) 128, 225, 271
TaqI TCGA 2 cut(s) 213, 311
TasI AATT 2 cut(s) 104, 231
TatI WGTACW 1 cut(s) 362
TfiI GAWTC 2 cut(s) 210, 340
TseFI GTSAC 1 cut(s) 128
Tsp45I GTSAC 1 cut(s) 128
TspDTI ATGAA 1 cut(s) 219
Van91I CCANNNNNTGG 1 cut(s) 292
ZrmI AGTACT 1 cut(s) 364
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.