Rorug06G0073300

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0017900
Physical Location & Seq
Reverse (-)
9738985 .. 9741597
2613 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0073300.1

Sequence Viewer

Length: 1431 bp
ATGGGTCTCTTTTCGTTTTCATCCCGATCTTCTGGGTCCGCCATGGCCCTCGCCGTTTTCTTCTTCCTCTTCCTCGGCCTAGCTTCCGCCGCCGACATGTCGATCATCGACTACGACAAGAAACACGGCATGGGTGTCGTACCAGAAAGGACCGAGGCCGAGGCGAAGGCCATGTACGAGTCGTGGCTGGTCAAACACCGCAAGGCGTACAATGTGCTGGGCGAGAAGGAGAGAAGGTTCCAGATTTTCAAGGATAATCTGAGGTTCATCGACGATCATAACAAGGTGAACCGGAGTTACAAGGTGGGGTTGAATAGGTTCGCGGATATGACGAACCTGGAGTACCGGTCGAGGTTCTTGGGGATGAAGAAGGACCGGGCGGCCAGGCTTTCAGGTGGGAAGACGGGTCGGTATGCTTATCGGGTCGGGGACAAGTTGCCCGAGACCGTGGATTGGAGGGCCAAGGGCGCTGTTTCCGAGGTTAAGGATCAAGGCCAATGCGGGAGTTGCTGGGCTTTCTCAACGGTTGGGGCAGTGGAAGGTGTAAACCAGATTGTGACCGGTGAGCTAATCTCATTGTCTGAGCAAGAACTTGTGGATTGTGATAAATCCTACAACCAGGGATGCAATGGAGGTCTTATGGACTATGCCTTCCAATTCATCATGAACAATGGTGGCATTGATTCCGAGGCTGATTACCCTTACCGGGGTACCGAGGGTTCATGTGATCCCAACAGGAAAAATGCTCGTGTTGTTTCCATTGATGGATATGAAGATGTTCCACAAAATGATGAGATCTCTTTGAAGAAGGCTTTGGCACATCAACCGGTGAGTGTTGCCATTGAAGCTGGGGGCCGGGAATTCCAGCTCTACCAATCGGGTGTATTCACTGGACGCTGTGGAACCGATCTAGACCATGGTGTGCTTACTGTTGGGTATGGTACCGACAATGGCAAGGACTATTGGATCGTGAAGAACTCATGGGGTCCTAACTGGGGAGAAGCTGGTTACATCAGGTTGGAGCGCAATGTAGCCGCCAAGACTGGCAAATGTGGCATTGCCATTGAGCCGTCATACCCAACAAAGAAGGGTCAGAACCCTCCTAGACCTGGCCCATCCCCTCCATCTCCTCCTCCCCCGGTGAATCCATCAACTGTTTGCGACGATTACTACTCGTGCCCTGCTGGAACCACTTGCTGCTGCGCCTATGCTTATGGAAACTTCTGCTTTGGGTGGGGATGCTGCCCTATGGAGTCTGCAACCTGCTGCGATGACCACTACAGCTGCTGCCCTAGTGACTACCCCGTCTGCGACCTTGATGCTGGAACTTGCAGACTGAGCAAGAACAGTCCAGTGAGTGTGAAGGCCTTGAAGAGAACTTCAGCTATGCATAACAAGCGCTGGATGGGTGGCTGGGGTCTAAGAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

476

Amino Acids

52.31

Weight (kDa)

7.72

Isoelectric Point (pI)

41.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inhibitor_I29 PF08246 59 - 115 7.3e-18 Cathepsin propeptide inhibitor domain (I29)
Peptidase_C1 PF00112 146 - 361 8e-88 Papain family cysteine protease
Granulin PF00396 398 - 444 6.3e-09 Granulin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017900)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G57565 AT5G57565 AT5G57565 AT5G57565 AT5G57565 AT5G57565
rosa_roxburghii Rroxscaffold_1G00016000 Rroxscaffold_2G00113020 Rroxscaffold_3G00227160
rosa_rugosa Rorug06G0073300
rosa_samantha Rh3AG270100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1304
Acc36I ACCTGC 1 cut(s) 1271
Acc65I GGTACC 2 cut(s) 710, 941
AccB1I GGYRCC 2 cut(s) 710, 941
AccII CGCG 1 cut(s) 323
AciI CCGC 8 cut(s) 39, 87, 90, 199, 323, 380, 501, 1035
AclWI GGATC 3 cut(s) 495, 722, 974
AcoI YGGCCR 1 cut(s) 381
AcsI RAATTY 1 cut(s) 860
AcuI CTGAAG 1 cut(s) 1365
AfaI GTAC 6 cut(s) 141, 176, 209, 344, 712, 943
AfeI AGCGCT 1 cut(s) 1400
AfiI CCNNNNNNNGG 5 cut(s) 453, 706, 707, 995, 1109
AflIII ACRYGT 1 cut(s) 96
AgeI ACCGGT 3 cut(s) 345, 560, 826
AgsI TTSAA 5 cut(s) 250, 313, 805, 845, 1372
AjnI CCWGG 4 cut(s) 336, 383, 618, 1108
AjuI GAANNNNNNNTTGG 2 cut(s) 797, 829
AloI GAACNNNNNNTCC 2 cut(s) 221, 253
AluBI AGCT 8 cut(s) 83, 568, 848, 868, 1004, 1284, 1385, 1427
AluI AGCT 8 cut(s) 83, 568, 848, 868, 1004, 1284, 1385, 1427
Alw26I GTCTC 2 cut(s) 11, 437
AlwI GGATC 3 cut(s) 495, 722, 974
AlwNI CAGNNNCTG 1 cut(s) 1287
Ama87I CYCGRG 1 cut(s) 440
Aor51HI AGCGCT 1 cut(s) 1400
ApeKI GCWGC 6 cut(s) 1197, 1200, 1242, 1266, 1284, 1287
ApoI RAATTY 1 cut(s) 860
AsiGI ACCGGT 3 cut(s) 345, 560, 826
Asp700I GAANNNNTTC 2 cut(s) 317, 777
Asp718I GGTACC 2 cut(s) 710, 941
AspLEI GCGC 4 cut(s) 470, 1026, 1205, 1401
AspS9I GGNCC 8 cut(s) 36, 46, 150, 373, 459, 853, 986, 1112
AsuC2I CCSGG 4 cut(s) 377, 707, 857, 1139
AsuHPI GGTGA 4 cut(s) 298, 575, 841, 1153
AvaI CYCGRG 1 cut(s) 440
AvaII GGWCC 4 cut(s) 36, 150, 373, 986
BaeGI GKGCMC 1 cut(s) 1181
BaeI ACNNNNGTAYC 2 cut(s) 694, 727
BanI GGYRCC 2 cut(s) 710, 941
BarI GAAGNNNNNNTAC 2 cut(s) 158, 190
BauI CACGAG 2 cut(s) 747, 1174
BbsI GAAGAC 1 cut(s) 407
BbvI GCAGC 6 cut(s) 1184, 1187, 1229, 1253, 1271, 1274
BccI CCATC 5 cut(s) 758, 1123, 1132, 1156, 1399
BceAI ACGGC 3 cut(s) 38, 142, 1054
BcgI CGANNNNNNTGC 4 cut(s) 118, 152, 1301, 1335
BciT130I CCWGG 4 cut(s) 338, 385, 620, 1110
BcnI CCSGG 4 cut(s) 377, 707, 857, 1139
BcoDI GTCTC 2 cut(s) 11, 437
BfaI CTAG 4 cut(s) 80, 911, 1104, 1293
BfmI CTRYAG 1 cut(s) 1279
BfoI RGCGCY 2 cut(s) 471, 1402
BfuAI ACCTGC 1 cut(s) 1271
BglII AGATCT 1 cut(s) 795
BisI GCNGC 9 cut(s) 90, 381, 1035, 1198, 1201, 1243, 1267, 1285, 1288
BlsI GCNGC 9 cut(s) 91, 382, 1036, 1199, 1202, 1244, 1268, 1286, 1289
Bme1390I CCNGG 8 cut(s) 338, 377, 385, 620, 707, 857, 1110, 1139
Bme18I GGWCC 4 cut(s) 36, 150, 373, 986
BmeT110I CYCGRG 1 cut(s) 440
BmgT120I GGNCC 8 cut(s) 36, 46, 150, 373, 459, 853, 986, 1112
BmiI GGNNCC 8 cut(s) 37, 239, 712, 854, 904, 943, 987, 1189
BmrFI CCNGG 8 cut(s) 338, 377, 385, 620, 707, 857, 1110, 1139
BmrI ACTGGG 1 cut(s) 1003
BmsI GCATC 3 cut(s) 614, 1229, 1309
BmuI ACTGGG 1 cut(s) 1003
BpiI GAAGAC 1 cut(s) 407
BplI GAGNNNNNCTC 2 cut(s) 557, 589
BpmI CTGGAG 1 cut(s) 359
BpuMI CCSGG 4 cut(s) 377, 707, 857, 1139
BsaI GGTCTC 2 cut(s) 11, 437
BsaWI WCCGGW 4 cut(s) 291, 345, 560, 826
BsaXI ACNNNNNCTCC 4 cut(s) 221, 251, 332, 362
Bsc4I CCNNNNNNNGG 5 cut(s) 453, 706, 707, 995, 1109
Bse118I RCCGGY 3 cut(s) 345, 560, 826
Bse1I ACTGG 4 cut(s) 895, 998, 1048, 1352
Bse3DI GCAATG 3 cut(s) 634, 1033, 1056
BseBI CCWGG 4 cut(s) 338, 385, 620, 1110
BseGI GGATG 6 cut(s) 20, 369, 629, 1115, 1244, 1410
BseLI CCNNNNNNNGG 5 cut(s) 453, 706, 707, 995, 1109
BseMI GCAATG 3 cut(s) 634, 1033, 1056
BseMII CTCAG 3 cut(s) 251, 573, 1328
BseNI ACTGG 4 cut(s) 895, 998, 1048, 1352
BseRI GAGGAG 2 cut(s) 1119, 1122
BseSI GKGCMC 1 cut(s) 1181
BseXI GCAGC 6 cut(s) 1184, 1187, 1229, 1253, 1271, 1274
BseYI CCCAGC 4 cut(s) 217, 510, 848, 1413
Bsh1236I CGCG 1 cut(s) 323
Bsh1285I CGRYCG 1 cut(s) 350
BshNI GGYRCC 2 cut(s) 710, 941
BshTI ACCGGT 3 cut(s) 345, 560, 826
BsiEI CGRYCG 1 cut(s) 350
BsiHKCI CYCGRG 1 cut(s) 440
BsiSI CCGG 8 cut(s) 292, 346, 376, 561, 706, 827, 856, 1139
BslFI GGGAC 1 cut(s) 443
BslI CCNNNNNNNGG 5 cut(s) 453, 706, 707, 995, 1109
BsmAI GTCTC 2 cut(s) 11, 437
BsmFI GGGAC 1 cut(s) 443
Bso31I GGTCTC 2 cut(s) 11, 437
BsoBI CYCGRG 1 cut(s) 440
Bsp1286I GDGCHC 1 cut(s) 1181
Bsp143I GATC 8 cut(s) 26, 102, 274, 487, 727, 795, 907, 966
Bsp19I CCATGG 2 cut(s) 42, 916
BspACI CCGC 8 cut(s) 39, 87, 90, 199, 323, 380, 501, 1035
BspCNI CTCAG 3 cut(s) 252, 574, 1329
BspFNI CGCG 1 cut(s) 323
BspHI TCATGA 1 cut(s) 663
BspLI GGNNCC 8 cut(s) 37, 239, 712, 854, 904, 943, 987, 1189
BspMI ACCTGC 1 cut(s) 1271
BspPI GGATC 3 cut(s) 495, 722, 974
BspT107I GGYRCC 2 cut(s) 710, 941
BspTNI GGTCTC 2 cut(s) 11, 437
BsrDI GCAATG 3 cut(s) 634, 1033, 1056
BsrFI RCCGGY 3 cut(s) 345, 560, 826
BsrI ACTGG 4 cut(s) 895, 998, 1048, 1352
BssAI RCCGGY 3 cut(s) 345, 560, 826
BssMI GATC 8 cut(s) 26, 102, 274, 487, 727, 795, 907, 966
BssSI CACGAG 2 cut(s) 747, 1174
BssT1I CCWWGG 3 cut(s) 42, 462, 916
Bst2BI CACGAG 2 cut(s) 747, 1174
Bst2UI CCWGG 4 cut(s) 338, 385, 620, 1110
Bst4CI ACNGT 5 cut(s) 448, 526, 931, 1156, 1349
Bst6I CTCTTC 2 cut(s) 74, 1367
BstDEI CTNAG 4 cut(s) 260, 582, 1337, 1421
BstDSI CCRYGG 3 cut(s) 42, 447, 916
BstF5I GGATG 6 cut(s) 20, 369, 629, 1115, 1244, 1410
BstFNI CGCG 1 cut(s) 323
BstH2I RGCGCY 2 cut(s) 471, 1402
BstHHI GCGC 4 cut(s) 470, 1026, 1205, 1401
BstKTI GATC 8 cut(s) 29, 105, 277, 490, 730, 798, 910, 969
BstMAI GTCTC 2 cut(s) 11, 437
BstMBI GATC 8 cut(s) 26, 102, 274, 487, 727, 795, 907, 966
BstMCI CGRYCG 1 cut(s) 350
BstMWI GCNNNNNNNGC 7 cut(s) 89, 467, 507, 845, 1053, 1338, 1396
BstNI CCWGG 4 cut(s) 338, 385, 620, 1110
BstNSI RCATGY 1 cut(s) 100
BstSCI CCNGG 8 cut(s) 336, 375, 383, 618, 705, 855, 1108, 1137
BstSFI CTRYAG 1 cut(s) 1279
BstSLI GKGCMC 1 cut(s) 1181
BstUI CGCG 1 cut(s) 323
BstV1I GCAGC 6 cut(s) 1184, 1187, 1229, 1253, 1271, 1274
BstV2I GAAGAC 1 cut(s) 407
BstX2I RGATCY 1 cut(s) 795
BstYI RGATCY 1 cut(s) 795
BtgI CCRYGG 3 cut(s) 42, 447, 916
BtgZI GCGATG 1 cut(s) 1284
BtsCI GGATG 6 cut(s) 20, 369, 629, 1115, 1244, 1410
BtsI GCAGTG 1 cut(s) 540
BtsIMutI CAGTG 3 cut(s) 540, 888, 1359
BveI ACCTGC 1 cut(s) 1271
CaiI CAGNNNCTG 1 cut(s) 1287
CciI TCATGA 1 cut(s) 663
CfoI GCGC 4 cut(s) 470, 1026, 1205, 1401
Cfr10I RCCGGY 3 cut(s) 345, 560, 826
Cfr13I GGNCC 8 cut(s) 36, 46, 150, 373, 459, 853, 986, 1112
CseI GACGC 1 cut(s) 903
Csp6I GTAC 6 cut(s) 140, 175, 208, 343, 711, 942
CspAI ACCGGT 3 cut(s) 345, 560, 826
CviAII CATG 8 cut(s) 43, 97, 130, 172, 664, 723, 917, 981
CviQI GTAC 6 cut(s) 140, 175, 208, 343, 711, 942
DdeI CTNAG 4 cut(s) 260, 582, 1337, 1421
DpnI GATC 8 cut(s) 28, 104, 276, 489, 729, 797, 909, 968
DpnII GATC 8 cut(s) 26, 102, 274, 487, 727, 795, 907, 966
DrdI GACNNNNNNGTC 1 cut(s) 1304
DseDI GACNNNNNNGTC 1 cut(s) 1304
EaeI YGGCCR 1 cut(s) 381
Eam1104I CTCTTC 2 cut(s) 74, 1367
EarI CTCTTC 2 cut(s) 74, 1367
EciI GGCGGA 2 cut(s) 28, 76
Eco130I CCWWGG 3 cut(s) 42, 462, 916
Eco147I AGGCCT 1 cut(s) 1367
Eco31I GGTCTC 2 cut(s) 11, 437
Eco47I GGWCC 4 cut(s) 36, 150, 373, 986
Eco47III AGCGCT 1 cut(s) 1400
Eco57I CTGAAG 1 cut(s) 1365
Eco88I CYCGRG 1 cut(s) 440
EcoO109I RGGNCCY 1 cut(s) 986
EcoRI GAATTC 1 cut(s) 860
EcoRII CCWGG 4 cut(s) 336, 383, 618, 1108
EcoT14I CCWWGG 3 cut(s) 42, 462, 916
EcoT22I ATGCAT 1 cut(s) 1392
ErhI CCWWGG 3 cut(s) 42, 462, 916
FaeI CATG 8 cut(s) 46, 100, 133, 175, 667, 726, 920, 984
FaqI GGGAC 1 cut(s) 443
FatI CATG 8 cut(s) 42, 96, 129, 171, 663, 722, 916, 980
FauI CCCGC 1 cut(s) 494
Fnu4HI GCNGC 9 cut(s) 90, 381, 1035, 1198, 1201, 1243, 1267, 1285, 1288
FokI GGATG 6 cut(s) 7, 376, 636, 1102, 1251, 1417
Fsp4HI GCNGC 9 cut(s) 90, 381, 1035, 1198, 1201, 1243, 1267, 1285, 1288
FspBI CTAG 4 cut(s) 80, 911, 1104, 1293
GlaI GCGC 4 cut(s) 469, 1025, 1204, 1400
GluI GCNGC 9 cut(s) 90, 381, 1035, 1198, 1201, 1243, 1267, 1285, 1288
GsaI CCCAGC 4 cut(s) 221, 514, 852, 1417
GsuI CTGGAG 1 cut(s) 359
HaeII RGCGCY 2 cut(s) 471, 1402
HapII CCGG 8 cut(s) 292, 346, 376, 561, 706, 827, 856, 1139
HgaI GACGC 1 cut(s) 903
HhaI GCGC 4 cut(s) 470, 1026, 1205, 1401
Hin1II CATG 8 cut(s) 46, 100, 133, 175, 667, 726, 920, 984
Hin6I GCGC 4 cut(s) 468, 1024, 1203, 1399
HinP1I GCGC 4 cut(s) 468, 1024, 1203, 1399
HinfI GANTC 4 cut(s) 179, 683, 1144, 1253
HpaII CCGG 8 cut(s) 292, 346, 376, 561, 706, 827, 856, 1139
HphI GGTGA 4 cut(s) 298, 575, 841, 1153
Hpy166II GTNNAC 2 cut(s) 289, 547
Hpy188I TCNGA 5 cut(s) 261, 478, 583, 688, 1095
Hpy188III TCNNGA 5 cut(s) 24, 241, 664, 911, 970
Hpy8I GTNNAC 2 cut(s) 289, 547
Hpy99I CGWCG 2 cut(s) 275, 1166
HpyAV CCTTC 9 cut(s) 160, 220, 228, 364, 533, 661, 802, 1081, 1357
HpyCH4III ACNGT 5 cut(s) 448, 526, 931, 1156, 1349
HpyCH4V TGCA 4 cut(s) 627, 1259, 1332, 1390
HpyF10VI GCNNNNNNNGC 7 cut(s) 89, 467, 507, 845, 1053, 1338, 1396
HpyF3I CTNAG 4 cut(s) 260, 582, 1337, 1421
Hsp92II CATG 8 cut(s) 46, 100, 133, 175, 667, 726, 920, 984
HspAI GCGC 4 cut(s) 468, 1024, 1203, 1399
KpnI GGTACC 2 cut(s) 714, 945
Kzo9I GATC 8 cut(s) 26, 102, 274, 487, 727, 795, 907, 966
LmnI GCTCC 1 cut(s) 1021
Lsp1109I GCAGC 6 cut(s) 1184, 1187, 1229, 1253, 1271, 1274
LweI GCATC 3 cut(s) 614, 1229, 1309
MaeI CTAG 4 cut(s) 80, 911, 1104, 1293
MaeIII GTNAC 4 cut(s) 296, 556, 1007, 1295
MalI GATC 8 cut(s) 28, 104, 276, 489, 729, 797, 909, 968
MboI GATC 8 cut(s) 26, 102, 274, 487, 727, 795, 907, 966
MflI RGATCY 1 cut(s) 795
MhlI GDGCHC 1 cut(s) 1181
MluCI AATT 2 cut(s) 656, 860
MlyI GAGTC 2 cut(s) 188, 1262
MmeI TCCRAC 1 cut(s) 999
Mph1103I ATGCAT 1 cut(s) 1392
MroXI GAANNNNTTC 2 cut(s) 317, 777
MseI TTAA 1 cut(s) 483
MspA1I CMGCKG 1 cut(s) 1284
MspI CCGG 8 cut(s) 292, 346, 376, 561, 706, 827, 856, 1139
MspR9I CCNGG 8 cut(s) 338, 377, 385, 620, 707, 857, 1110, 1139
MvaI CCWGG 4 cut(s) 338, 385, 620, 1110
MvnI CGCG 1 cut(s) 323
MwoI GCNNNNNNNGC 7 cut(s) 89, 467, 507, 845, 1053, 1338, 1396
NciI CCSGG 4 cut(s) 377, 707, 857, 1139
NcoI CCATGG 2 cut(s) 42, 916
NdeII GATC 8 cut(s) 26, 102, 274, 487, 727, 795, 907, 966
NlaIII CATG 8 cut(s) 46, 100, 133, 175, 667, 726, 920, 984
NlaIV GGNNCC 8 cut(s) 37, 239, 712, 854, 904, 943, 987, 1189
NmeAIII GCCGAG 2 cut(s) 54, 184
NmuCI GTSAC 2 cut(s) 556, 1295
NsiI ATGCAT 1 cut(s) 1392
NspI RCATGY 1 cut(s) 100
PagI TCATGA 1 cut(s) 663
PceI AGGCCT 1 cut(s) 1367
PciI ACATGT 1 cut(s) 96
PdmI GAANNNNTTC 2 cut(s) 317, 777
PfeI GAWTC 2 cut(s) 683, 1144
PinAI ACCGGT 3 cut(s) 345, 560, 826
PkrI GCNGC 9 cut(s) 91, 382, 1036, 1199, 1202, 1244, 1268, 1286, 1289
PleI GAGTC 2 cut(s) 187, 1261
PpsI GAGTC 2 cut(s) 187, 1261
PpuMI RGGWCCY 1 cut(s) 986
PscI ACATGT 1 cut(s) 96
Psp5II RGGWCCY 1 cut(s) 986
Psp6I CCWGG 4 cut(s) 336, 383, 618, 1108
PspFI CCCAGC 4 cut(s) 217, 510, 848, 1413
PspGI CCWGG 4 cut(s) 336, 383, 618, 1108
PspN4I GGNNCC 8 cut(s) 37, 239, 712, 854, 904, 943, 987, 1189
PspPI GGNCC 8 cut(s) 36, 46, 150, 373, 459, 853, 986, 1112
PspPPI RGGWCCY 1 cut(s) 986
PsrI GAACNNNNNNTAC 6 cut(s) 281, 313, 326, 358, 703, 735
PstNI CAGNNNCTG 1 cut(s) 1287
PsuI RGATCY 1 cut(s) 795
PvuII CAGCTG 1 cut(s) 1284
RsaI GTAC 6 cut(s) 141, 176, 209, 344, 712, 943
RsaNI GTAC 6 cut(s) 140, 175, 208, 343, 711, 942
SaqAI TTAA 1 cut(s) 483
SatI GCNGC 9 cut(s) 90, 381, 1035, 1198, 1201, 1243, 1267, 1285, 1288
Sau3AI GATC 8 cut(s) 26, 102, 274, 487, 727, 795, 907, 966
Sau96I GGNCC 8 cut(s) 36, 46, 150, 373, 459, 853, 986, 1112
SchI GAGTC 2 cut(s) 188, 1262
ScrFI CCNGG 8 cut(s) 338, 377, 385, 620, 707, 857, 1110, 1139
SduI GDGCHC 1 cut(s) 1181
SfaNI GCATC 3 cut(s) 614, 1229, 1309
SfcI CTRYAG 1 cut(s) 1279
SinI GGWCC 4 cut(s) 36, 150, 373, 986
Sse9I AATT 2 cut(s) 656, 860
SseBI AGGCCT 1 cut(s) 1367
SsiI CCGC 8 cut(s) 39, 87, 90, 199, 323, 380, 501, 1035
SspMI CTAG 4 cut(s) 80, 911, 1104, 1293
StuI AGGCCT 1 cut(s) 1367
StyD4I CCNGG 8 cut(s) 336, 375, 383, 618, 705, 855, 1108, 1137
StyI CCWWGG 3 cut(s) 42, 462, 916
TaaI ACNGT 5 cut(s) 448, 526, 931, 1156, 1349
TaqI TCGA 4 cut(s) 101, 108, 270, 350
TaqII GACCGA 1 cut(s) 167
TasI AATT 2 cut(s) 656, 860
TauI GCSGC 3 cut(s) 92, 383, 1037
TfiI GAWTC 2 cut(s) 683, 1144
Tru1I TTAA 1 cut(s) 483
Tru9I TTAA 1 cut(s) 483
TscAI CASTG 3 cut(s) 540, 895, 1359
TseFI GTSAC 2 cut(s) 556, 1295
TseI GCWGC 6 cut(s) 1197, 1200, 1242, 1266, 1284, 1287
Tsp45I GTSAC 2 cut(s) 556, 1295
TspDTI ATGAA 7 cut(s) 9, 256, 380, 649, 680, 711, 786
TspRI CASTG 3 cut(s) 540, 895, 1359
VpaK11BI GGWCC 4 cut(s) 36, 150, 373, 986
XapI RAATTY 1 cut(s) 860
XbaI TCTAGA 1 cut(s) 910
XceI RCATGY 1 cut(s) 100
XcmI CCANNNNNNNNNTGG 1 cut(s) 626
XmnI GAANNNNTTC 2 cut(s) 317, 777
XspI CTAG 4 cut(s) 80, 911, 1104, 1293
Zsp2I ATGCAT 1 cut(s) 1392
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.