No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0315121 RchiOBHm_Chr2g0084231 |
| rosa_multiflora | Rmu_sc0006952.1_g000017 |
| rosa_roxburghii | Rroxscaffold_2G00115580 Rroxscaffold_3G00230230 |
| rosa_samantha | Rh6AG517800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 5 |
| AfaI | GTAC | 1 cut(s) | 68 |
| AgsI | TTSAA | 5 cut(s) | 52, 164, 177, 184, 190 |
| AluBI | AGCT | 1 cut(s) | 160 |
| AluI | AGCT | 1 cut(s) | 160 |
| Alw21I | GWGCWC | 1 cut(s) | 42 |
| Ama87I | CYCGRG | 1 cut(s) | 41 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 168 |
| AvaI | CYCGRG | 1 cut(s) | 41 |
| Bbv12I | GWGCWC | 1 cut(s) | 42 |
| BccI | CCATC | 1 cut(s) | 219 |
| BceAI | ACGGC | 3 cut(s) | 41, 105, 137 |
| BisI | GCNGC | 1 cut(s) | 5 |
| BlsI | GCNGC | 1 cut(s) | 6 |
| BmeT110I | CYCGRG | 1 cut(s) | 41 |
| BmiI | GGNNCC | 1 cut(s) | 151 |
| BmsI | GCATC | 1 cut(s) | 136 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 116, 148 |
| BpuEI | CTTGAG | 1 cut(s) | 110 |
| BsaJI | CCNNGG | 1 cut(s) | 145 |
| Bse118I | RCCGGY | 1 cut(s) | 7 |
| BseDI | CCNNGG | 1 cut(s) | 145 |
| BseGI | GGATG | 1 cut(s) | 127 |
| BseMII | CTCAG | 1 cut(s) | 48 |
| BsiHKAI | GWGCWC | 1 cut(s) | 42 |
| BsiHKCI | CYCGRG | 1 cut(s) | 41 |
| BsiSI | CCGG | 1 cut(s) | 8 |
| BsoBI | CYCGRG | 1 cut(s) | 41 |
| Bsp1286I | GDGCHC | 1 cut(s) | 42 |
| Bsp1407I | TGTACA | 1 cut(s) | 66 |
| BspACI | CCGC | 1 cut(s) | 5 |
| BspCNI | CTCAG | 1 cut(s) | 49 |
| BspLI | GGNNCC | 1 cut(s) | 151 |
| BsrFI | RCCGGY | 1 cut(s) | 7 |
| BsrGI | TGTACA | 1 cut(s) | 66 |
| BssAI | RCCGGY | 1 cut(s) | 7 |
| BssECI | CCNNGG | 1 cut(s) | 145 |
| BssT1I | CCWWGG | 1 cut(s) | 145 |
| BstAUI | TGTACA | 1 cut(s) | 66 |
| BstDEI | CTNAG | 1 cut(s) | 57 |
| BstF5I | GGATG | 1 cut(s) | 127 |
| BtsCI | GGATG | 1 cut(s) | 127 |
| Cfr10I | RCCGGY | 1 cut(s) | 7 |
| Csp6I | GTAC | 1 cut(s) | 67 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 127, 162 |
| CviJI | RGCY | 4 cut(s) | 56, 120, 152, 160 |
| CviKI_1 | RGCY | 4 cut(s) | 56, 120, 152, 160 |
| CviQI | GTAC | 1 cut(s) | 67 |
| DdeI | CTNAG | 1 cut(s) | 57 |
| Eco130I | CCWWGG | 1 cut(s) | 145 |
| Eco88I | CYCGRG | 1 cut(s) | 41 |
| EcoT14I | CCWWGG | 1 cut(s) | 145 |
| ErhI | CCWWGG | 1 cut(s) | 145 |
| FaiI | YATR | 4 cut(s) | 63, 207, 237, 250 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 156, 188 |
| Fnu4HI | GCNGC | 1 cut(s) | 5 |
| FokI | GGATG | 1 cut(s) | 114 |
| Fsp4HI | GCNGC | 1 cut(s) | 5 |
| GluI | GCNGC | 1 cut(s) | 5 |
| HapII | CCGG | 1 cut(s) | 8 |
| HindIII | AAGCTT | 1 cut(s) | 158 |
| HinfI | GANTC | 1 cut(s) | 80 |
| HpaII | CCGG | 1 cut(s) | 8 |
| Hpy166II | GTNNAC | 1 cut(s) | 67 |
| Hpy188I | TCNGA | 2 cut(s) | 16, 79 |
| Hpy188III | TCNNGA | 2 cut(s) | 89, 222 |
| Hpy8I | GTNNAC | 1 cut(s) | 67 |
| HpyAV | CCTTC | 2 cut(s) | 46, 101 |
| HpyF3I | CTNAG | 1 cut(s) | 57 |
| LmnI | GCTCC | 1 cut(s) | 149 |
| LpnPI | CCDG | 1 cut(s) | 21 |
| LweI | GCATC | 1 cut(s) | 136 |
| MboII | GAAGA | 4 cut(s) | 116, 123, 126, 176 |
| MhlI | GDGCHC | 1 cut(s) | 42 |
| MluCI | AATT | 1 cut(s) | 20 |
| MlyI | GAGTC | 1 cut(s) | 89 |
| MnlI | CCTC | 3 cut(s) | 66, 142, 234 |
| MroXI | GAANNNNTTC | 1 cut(s) | 168 |
| MseI | TTAA | 1 cut(s) | 230 |
| MspI | CCGG | 1 cut(s) | 8 |
| NlaIV | GGNNCC | 1 cut(s) | 151 |
| PaeR7I | CTCGAG | 1 cut(s) | 41 |
| PdmI | GAANNNNTTC | 1 cut(s) | 168 |
| PkrI | GCNGC | 1 cut(s) | 6 |
| PleI | GAGTC | 1 cut(s) | 88 |
| PpsI | GAGTC | 1 cut(s) | 88 |
| PspN4I | GGNNCC | 1 cut(s) | 151 |
| PspXI | VCTCGAGB | 1 cut(s) | 41 |
| RsaI | GTAC | 1 cut(s) | 68 |
| RsaNI | GTAC | 1 cut(s) | 67 |
| SaqAI | TTAA | 1 cut(s) | 230 |
| SatI | GCNGC | 1 cut(s) | 5 |
| SchI | GAGTC | 1 cut(s) | 89 |
| SduI | GDGCHC | 1 cut(s) | 42 |
| SetI | ASST | 4 cut(s) | 35, 77, 147, 162 |
| SfaNI | GCATC | 1 cut(s) | 136 |
| Sfr274I | CTCGAG | 1 cut(s) | 41 |
| SlaI | CTCGAG | 1 cut(s) | 41 |
| SmlI | CTYRAG | 2 cut(s) | 41, 89 |
| SmoI | CTYRAG | 2 cut(s) | 41, 89 |
| Sse9I | AATT | 1 cut(s) | 20 |
| SsiI | CCGC | 1 cut(s) | 5 |
| StyI | CCWWGG | 1 cut(s) | 145 |
| TaqI | TCGA | 1 cut(s) | 42 |
| TasI | AATT | 1 cut(s) | 20 |
| TatI | WGTACW | 1 cut(s) | 66 |
| TauI | GCSGC | 1 cut(s) | 7 |
| Tru1I | TTAA | 1 cut(s) | 230 |
| Tru9I | TTAA | 1 cut(s) | 230 |
| XhoI | CTCGAG | 1 cut(s) | 41 |
| XmnI | GAANNNNTTC | 1 cut(s) | 168 |